RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 ZFC3H1O60293 1989 aaKnown RBP0.27□□□□□ -2.37
SCFD1-218ENST00000556256 DSTQ03001 7570 aaKnown RBP0.27□□□□□ -2.37
SCFD1-218ENST00000556256 BCL2P10415 239 aa0.27□□□□□ -2.37
SCFD1-218ENST00000556256 FABP2P12104 132 aa0.27□□□□□ -2.37
SCFD1-218ENST00000556256 CCL4P13236 92 aa0.27□□□□□ -2.37
SCFD1-218ENST00000556256 RPL37AP61513 92 aaKnown RBP0.27□□□□□ -2.37
SCFD1-218ENST00000556256 IZUMO2Q6UXV1 221 aa0.27□□□□□ -2.37
SCFD1-218ENST00000556256 CROCCP2Q86T23 111 aa0.27□□□□□ -2.37
SCFD1-218ENST00000556256 OR4B1Q8NGF8 309 aa0.27□□□□□ -2.37
SCFD1-218ENST00000556256 CCL19Q99731 98 aa0.27□□□□□ -2.37
SCFD1-218ENST00000556256 PCBD2Q9H0N5 130 aa0.27□□□□□ -2.37
SCFD1-218ENST00000556256 BOKQ9UMX3 212 aaPredicted RBP0.27□□□□□ -2.37
SCFD1-218ENST00000556256 ZCCHC11Q5TAX3 1644 aaKnown RBP0.27□□□□□ -2.37
SCFD1-218ENST00000556256 TRBV27A0A0K0K1C4 114 aa0.26□□□□□ -2.37
SCFD1-218ENST00000556256 NUPR2A6NF83 97 aa0.26□□□□□ -2.37
SCFD1-218ENST00000556256 TRACP01848 142 aa0.26□□□□□ -2.37
SCFD1-218ENST00000556256 S100A11P31949 105 aa0.26□□□□□ -2.37
SCFD1-218ENST00000556256 SDC2P34741 201 aa0.26□□□□□ -2.37
SCFD1-218ENST00000556256 ANGPTL5Q86XS5 388 aa0.26□□□□□ -2.37
SCFD1-218ENST00000556256 STX12Q86Y82 276 aa0.26□□□□□ -2.37
SCFD1-218ENST00000556256 C10orf111Q8N326 155 aa0.26□□□□□ -2.37
SCFD1-218ENST00000556256 PLAC4Q8WY50 150 aa0.26□□□□□ -2.37
SCFD1-218ENST00000556256 PRELID3AQ96N28 172 aa0.26□□□□□ -2.37
SCFD1-218ENST00000556256 ATPIF1Q9UII2 106 aa0.26□□□□□ -2.37
SCFD1-218ENST00000556256 LAMTOR2Q9Y2Q5 125 aa0.26□□□□□ -2.37
SCFD1-218ENST00000556256 TCOF1Q13428 1488 aaKnown RBP0.25□□□□□ -2.37
SCFD1-218ENST00000556256 TRBV7-6A0A0J9YX20 115 aa0.25□□□□□ -2.37
SCFD1-218ENST00000556256 ZNF137PP52743 207 aa0.25□□□□□ -2.37
SCFD1-218ENST00000556256 NDUFA6P56556 154 aa0.25□□□□□ -2.37
SCFD1-218ENST00000556256 HRCT1Q6UXD1 115 aa0.25□□□□□ -2.37
SCFD1-218ENST00000556256 CASC2Q6XLA1 102 aa0.25□□□□□ -2.37
SCFD1-218ENST00000556256 Q6ZS92 163 aa0.25□□□□□ -2.37
SCFD1-218ENST00000556256 OR5H6Q8NGV6 325 aa0.25□□□□□ -2.37
SCFD1-218ENST00000556256 OR5AK2Q8NH90 309 aa0.25□□□□□ -2.37
SCFD1-218ENST00000556256 GRPEL2Q8TAA5 225 aa0.25□□□□□ -2.37
SCFD1-218ENST00000556256 THEM6Q8WUY1 208 aa0.25□□□□□ -2.37
SCFD1-218ENST00000556256 CLEC2BQ92478 149 aa0.25□□□□□ -2.37
SCFD1-218ENST00000556256 NABP2Q9BQ15 211 aa0.25□□□□□ -2.37
SCFD1-218ENST00000556256 LPAR5Q9H1C0 372 aa0.25□□□□□ -2.37
SCFD1-218ENST00000556256 PLAC8Q9NZF1 115 aa0.25□□□□□ -2.37
SCFD1-218ENST00000556256 FANCMQ8IYD8 2048 aa0.25□□□□□ -2.37
SCFD1-218ENST00000556256 C3orf85A0A1B0GTC6 90 aa0.24□□□□□ -2.37
SCFD1-218ENST00000556256 SAA1P0DJI8 122 aaPredicted RBP0.24□□□□□ -2.37
SCFD1-218ENST00000556256 S100A5P33763 92 aa0.24□□□□□ -2.37
SCFD1-218ENST00000556256 SPINT3P49223 89 aa0.24□□□□□ -2.37
SCFD1-218ENST00000556256 POLR2HP52434 150 aaKnown RBP0.24□□□□□ -2.37
SCFD1-218ENST00000556256 MAXP61244 160 aa0.24□□□□□ -2.37
SCFD1-218ENST00000556256 NEDD8Q15843 81 aa0.24□□□□□ -2.37
SCFD1-218ENST00000556256 C10orf99Q6UWK7 81 aa0.24□□□□□ -2.37
SCFD1-218ENST00000556256 LINC00305Q7Z4B0 112 aa0.24□□□□□ -2.37
SCFD1-218ENST00000556256 DEFB132Q7Z7B7 95 aa0.24□□□□□ -2.37
SCFD1-218ENST00000556256 CIB3Q96Q77 187 aaPredicted RBP0.24□□□□□ -2.37
SCFD1-218ENST00000556256 FAM103A1Q9BTL3 118 aaKnown RBP0.24□□□□□ -2.37
SCFD1-218ENST00000556256 CCDC32Q9BV29 185 aa0.24□□□□□ -2.37
SCFD1-218ENST00000556256 JPT1Q9UK76 154 aa0.24□□□□□ -2.37
SCFD1-218ENST00000556256 MED31Q9Y3C7 131 aa0.24□□□□□ -2.37
SCFD1-218ENST00000556256 MYH3P11055 1940 aa0.24□□□□□ -2.37
SCFD1-218ENST00000556256 FAM135BQ49AJ0 1406 aa0.23□□□□□ -2.37
SCFD1-218ENST00000556256 SSPOA2VEC9 5147 aa0.23□□□□□ -2.37
SCFD1-218ENST00000556256 TRAV13-1A0A0B4J241 112 aa0.23□□□□□ -2.37
SCFD1-218ENST00000556256 C5orf58C9J3I9 102 aa0.23□□□□□ -2.37
SCFD1-218ENST00000556256 TPT1P13693 172 aaKnown RBP0.23□□□□□ -2.37
SCFD1-218ENST00000556256 SPINK7P58062 85 aa0.23□□□□□ -2.37
SCFD1-218ENST00000556256 C6orf52Q5T4I8 152 aa0.23□□□□□ -2.37
SCFD1-218ENST00000556256 CSAG1Q6PB30 78 aa0.23□□□□□ -2.37
SCFD1-218ENST00000556256 Q86TA4 180 aa0.23□□□□□ -2.37
SCFD1-218ENST00000556256 C5orf17Q8NAS9 161 aa0.23□□□□□ -2.37
SCFD1-218ENST00000556256 MORN4Q8NDC4 146 aa0.23□□□□□ -2.37
SCFD1-218ENST00000556256 CENPHQ9H3R5 247 aa0.23□□□□□ -2.37
SCFD1-218ENST00000556256 MPC1Q9Y5U8 109 aa0.23□□□□□ -2.37
SCFD1-218ENST00000556256 CTTNBP2Q8WZ74 1663 aa0.23□□□□□ -2.37
SCFD1-218ENST00000556256 ZGRF1Q86YA3 2104 aa0.23□□□□□ -2.37
SCFD1-218ENST00000556256 ZNF462Q96JM2 2506 aa0.23□□□□□ -2.37
SCFD1-218ENST00000556256 KCPQ6ZWJ8 1503 aa0.23□□□□□ -2.37
SCFD1-218ENST00000556256 DLC1Q96QB1 1528 aa0.23□□□□□ -2.37
SCFD1-218ENST00000556256 E7EQ34 232 aa0.22□□□□□ -2.37
SCFD1-218ENST00000556256 H3BMG7 143 aa0.22□□□□□ -2.37
SCFD1-218ENST00000556256 PFDN1O60925 122 aa0.22□□□□□ -2.37
SCFD1-218ENST00000556256 SULT1C4O75897 302 aa0.22□□□□□ -2.37
SCFD1-218ENST00000556256 FAM107AO95990 144 aa0.22□□□□□ -2.37
SCFD1-218ENST00000556256 GYPBP06028 91 aa0.22□□□□□ -2.37
SCFD1-218ENST00000556256 FABP1P07148 127 aa0.22□□□□□ -2.37
SCFD1-218ENST00000556256 RPL7P18124 248 aaKnown RBP0.22□□□□□ -2.37
SCFD1-218ENST00000556256 CAV3P56539 151 aa0.22□□□□□ -2.37
SCFD1-218ENST00000556256 CCSMST1Q4G0I0 132 aa0.22□□□□□ -2.37
SCFD1-218ENST00000556256 XAF1Q6GPH4 301 aa0.22□□□□□ -2.37
SCFD1-218ENST00000556256 TEX29Q8N6K0 151 aa0.22□□□□□ -2.37
SCFD1-218ENST00000556256 TMEM229BQ8NBD8 167 aa0.22□□□□□ -2.37
SCFD1-218ENST00000556256 LXNQ9BS40 222 aa0.22□□□□□ -2.37
SCFD1-218ENST00000556256 FKBP11Q9NYL4 201 aa0.22□□□□□ -2.37
SCFD1-218ENST00000556256 PTPRDP23468 1912 aa0.22□□□□□ -2.37
SCFD1-218ENST00000556256 FGD6Q6ZV73 1430 aa0.21□□□□□ -2.38
SCFD1-218ENST00000556256 LOC107984640A0A0U1RRK4 108 aa0.21□□□□□ -2.38
SCFD1-218ENST00000556256 A0A1W2PPB8 328 aa0.21□□□□□ -2.38
SCFD1-218ENST00000556256 A0A1W2PRS3 328 aa0.21□□□□□ -2.38
SCFD1-218ENST00000556256 KIR3DP1A8MWS1 328 aa0.21□□□□□ -2.38
SCFD1-218ENST00000556256 SLC25A4P12235 298 aa0.21□□□□□ -2.38
SCFD1-218ENST00000556256 SRP9P49458 86 aaKnown RBP0.21□□□□□ -2.38
SCFD1-218ENST00000556256 FXYD6P3P58550 94 aa0.21□□□□□ -2.38
SCFD1-218ENST00000556256 DNAJB13P59910 316 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms