RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 WFDC11Q8NEX6 87 aa6.33□□□□□ -1.4
ATXN3-235ENST00000556082 ZC2HC1AQ96GY0 325 aa6.33□□□□□ -1.4
ATXN3-235ENST00000556082 PRR25Q96S07 402 aa6.33□□□□□ -1.4
ATXN3-235ENST00000556082 NEU1Q99519 415 aa6.33□□□□□ -1.4
ATXN3-235ENST00000556082 ZNF702PQ9H963 129 aa6.33□□□□□ -1.4
ATXN3-235ENST00000556082 UTP20O75691 2785 aaKnown RBP6.33□□□□□ -1.4
ATXN3-235ENST00000556082 CHD6Q8TD26 2715 aa6.33□□□□□ -1.4
ATXN3-235ENST00000556082 POLQO75417 2590 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 IGHV3OR16-8A0A075B7F1 116 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 TRAV8-2A0A0B4J237 113 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 IGHV7-4-1A0A0J9YVY3 117 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 HIGD1CA8MV81 97 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 A8MWP6 167 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 CA1P00915 261 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-235ENST00000556082 TRBV12-3P01733 135 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 CT45A10P0DMU9 189 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 ESDP10768 282 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 S100A2P29034 98 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 TCL1AP56279 114 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 FAM106AQ4KMX7 169 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 DNLZQ5SXM8 178 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 SAMD13Q5VXD3 122 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 Q6AWC8 147 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 UNQ9165/PRO28630Q6UXU0 137 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 GTSF1Q8WW33 167 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 C8orf49Q96NF6 230 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 KRTAP3-1Q9BYR8 98 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 GPR61Q9BZJ8 451 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 CSPG4Q6UVK1 2322 aa6.32□□□□□ -1.4
ATXN3-235ENST00000556082 A0A1B0GW15 77 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 SNURFLB1AK76 121 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 CD5LO43866 347 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 IGHV3-11P01762 117 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 FRMD6-AS1P0C7T7 363 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 BMI1P35226 326 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 RPS20P60866 119 aaKnown RBP6.31□□□□□ -1.4
ATXN3-235ENST00000556082 FAM162BQ5T6X4 162 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 GFI1BQ5VTD9 330 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 C9orf47Q6ZRZ4 202 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 GATD1Q8NB37 220 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 OR2D3Q8NGH3 330 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 UBE2E2Q96LR5 201 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 PACRGQ96M98 296 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-235ENST00000556082 HIST1H2BLQ99880 126 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 VGLL1Q99990 258 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 NDFIP1Q9BT67 221 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 DAZ1Q9NQZ3 744 aaKnown RBP6.31□□□□□ -1.4
ATXN3-235ENST00000556082 SMPXQ9UHP9 88 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 UFC1Q9Y3C8 167 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 LENEPQ9Y5L5 61 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 CR1P17927 2039 aa6.31□□□□□ -1.4
ATXN3-235ENST00000556082 IGKV2-40A0A087WW87 121 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-235ENST00000556082 IGHV3-66A0A0C4DH42 116 aa6.3□□□□□ -1.4
ATXN3-235ENST00000556082 ZNF705FA8MVS1 300 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-235ENST00000556082 LGALS9O00182 355 aa6.3□□□□□ -1.4
ATXN3-235ENST00000556082 SOCS3O14543 225 aa6.3□□□□□ -1.4
ATXN3-235ENST00000556082 SMAD7O15105 426 aaKnown RBP6.3□□□□□ -1.4
ATXN3-235ENST00000556082 ZNF207O43670 478 aaKnown RBP6.3□□□□□ -1.4
ATXN3-235ENST00000556082 IGKV2D-40P01614 121 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-235ENST00000556082 APCSP02743 223 aa6.3□□□□□ -1.4
ATXN3-235ENST00000556082 CRISP2P16562 243 aa6.3□□□□□ -1.4
ATXN3-235ENST00000556082 HBBP68871 147 aa6.3□□□□□ -1.4
ATXN3-235ENST00000556082 TMEM95Q3KNT9 176 aa6.3□□□□□ -1.4
ATXN3-235ENST00000556082 OR10J3Q5JRS4 329 aa6.3□□□□□ -1.4
ATXN3-235ENST00000556082 MRPL54Q6P161 138 aaKnown RBP6.3□□□□□ -1.4
ATXN3-235ENST00000556082 SIGLECL1Q8N7X8 197 aa6.3□□□□□ -1.4
ATXN3-235ENST00000556082 C12orf57Q99622 126 aa6.3□□□□□ -1.4
ATXN3-235ENST00000556082 CREBBPQ92793 2442 aa6.3□□□□□ -1.4
ATXN3-235ENST00000556082 ABCA12Q86UK0 2595 aa6.3□□□□□ -1.4
ATXN3-235ENST00000556082 CENPEQ02224 2701 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 APCP25054 2843 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 IGHV3-49A0A0A0MS15 119 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 TRBV7-9A0A0J9YWB2 115 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 TMEM189A5PLL7 270 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 FABP5P3A8MUU1 101 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 PRAC2D3DTV9 90 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 OVOL1O14753 267 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 SPINK4O60575 86 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 SH2D1AO60880 128 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 AMBPP02760 352 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 LGALS1P09382 135 aaKnown RBP6.29□□□□□ -1.4
ATXN3-235ENST00000556082 HLA-DMBP28068 263 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 ZNF138P52744 262 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 KRTAP1-1Q07627 177 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 RIGQ13278 110 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 KLF5Q13887 457 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-235ENST00000556082 GDF5OSQ5U4N7 250 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 IGFL4Q6B9Z1 124 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 HIST2H2BCQ6DN03 193 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 TCF24Q7RTU0 167 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 OR10D4PQ8NGN7 298 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 TMEM18Q96B42 140 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 C16orf92Q96LL3 132 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 LINC00477Q96M19 166 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 ASCL2Q99929 193 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 RHPN1-AS1Q9BWJ2 59 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 AGPAT4-IT1Q9H0P7 198 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 CELSR2Q9HCU4 2923 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 TMEM160Q9NX00 188 aa6.29□□□□□ -1.4
ATXN3-235ENST00000556082 CRYBG3Q68DQ2 2970 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms