RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 BSNQ9UPA5 3926 aa7.46□□□□□ -1.22
SYNE2-213ENST00000554805 CRYBG3Q68DQ2 2970 aa7.46□□□□□ -1.22
SYNE2-213ENST00000554805 TRBV6-1A0A0K0K1D8 114 aa7.45□□□□□ -1.22
SYNE2-213ENST00000554805 RHOGP84095 191 aa7.45□□□□□ -1.22
SYNE2-213ENST00000554805 COTL1Q14019 142 aa7.45□□□□□ -1.22
SYNE2-213ENST00000554805 ECSCRQ19T08 205 aa7.45□□□□□ -1.22
SYNE2-213ENST00000554805 VGLL1Q99990 258 aa7.45□□□□□ -1.22
SYNE2-213ENST00000554805 CCL21O00585 134 aa7.45□□□□□ -1.22
SYNE2-213ENST00000554805 HBDP02042 147 aa7.45□□□□□ -1.22
SYNE2-213ENST00000554805 HOXB4P17483 251 aaPredicted RBP7.45□□□□□ -1.22
SYNE2-213ENST00000554805 BMI1P35226 326 aa7.45□□□□□ -1.22
SYNE2-213ENST00000554805 IFI27L1Q96BM0 104 aa7.45□□□□□ -1.22
SYNE2-213ENST00000554805 PEF1Q9UBV8 284 aaKnown RBP7.45□□□□□ -1.22
SYNE2-213ENST00000554805 IGHV3-49A0A0A0MS15 119 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 WI2-2373I1.2A0A1W2PRP0 233 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 GAGE10A6NGK3 116 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 LY6LH3BQJ8 138 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 EGR2P11161 476 aaPredicted RBP7.44□□□□□ -1.22
SYNE2-213ENST00000554805 FANCD2OSQ96PS1 177 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 PRR25Q96S07 402 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 VKORC1Q9BQB6 163 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 NPYP01303 97 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 PRSS1P07477 247 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 ERCC8Q13216 396 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 FOXE3Q13461 319 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 PDE6HQ13956 83 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 TM4SF20Q53R12 229 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 TRAV8-6A0A0B4J262 113 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 A1L4Q6 167 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 EVI2AP22794 236 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 RBX1P62877 108 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 NDPQ00604 133 aa7.44□□□□□ -1.22
SYNE2-213ENST00000554805 ZNF462Q96JM2 2506 aa7.43□□□□□ -1.22
SYNE2-213ENST00000554805 ZNF562Q6V9R5 426 aa7.43□□□□□ -1.22
SYNE2-213ENST00000554805 MSRB1Q9NZV6 116 aa7.43□□□□□ -1.22
SYNE2-213ENST00000554805 CHTOPQ9Y3Y2 248 aaKnown RBP7.43□□□□□ -1.22
SYNE2-213ENST00000554805 IGLV11-55A0A075B6I3 123 aa7.43□□□□□ -1.22
SYNE2-213ENST00000554805 A6NDN8 102 aa7.43□□□□□ -1.22
SYNE2-213ENST00000554805 MRPS12O15235 138 aaKnown RBP7.43□□□□□ -1.22
SYNE2-213ENST00000554805 ZNF207O43670 478 aaKnown RBP7.43□□□□□ -1.22
SYNE2-213ENST00000554805 PPBPP02775 128 aa7.43□□□□□ -1.22
SYNE2-213ENST00000554805 CCDC144NLQ6NUI1 221 aa7.43□□□□□ -1.22
SYNE2-213ENST00000554805 PRSS57Q6UWY2 283 aa7.43□□□□□ -1.22
SYNE2-213ENST00000554805 MAP1LC3AQ9H492 121 aa7.43□□□□□ -1.22
SYNE2-213ENST00000554805 CST9LQ9H4G1 147 aa7.43□□□□□ -1.22
SYNE2-213ENST00000554805 H3BUT2 72 aa7.43□□□□□ -1.22
SYNE2-213ENST00000554805 ZNF80P51504 273 aaPredicted RBP7.43□□□□□ -1.22
SYNE2-213ENST00000554805 VMO1Q7Z5L0 202 aa7.43□□□□□ -1.22
SYNE2-213ENST00000554805 CFHR4Q92496 578 aa7.43□□□□□ -1.22
SYNE2-213ENST00000554805 MSRB2Q9Y3D2 182 aa7.43□□□□□ -1.22
SYNE2-213ENST00000554805 NDUFS8O00217 210 aa7.42□□□□□ -1.22
SYNE2-213ENST00000554805 K7ENP7 123 aa7.42□□□□□ -1.22
SYNE2-213ENST00000554805 PRTN3P24158 256 aa7.42□□□□□ -1.22
SYNE2-213ENST00000554805 LEPP41159 167 aa7.42□□□□□ -1.22
SYNE2-213ENST00000554805 C2orf91Q6ZV80 131 aa7.42□□□□□ -1.22
SYNE2-213ENST00000554805 RNF182Q8N6D2 247 aa7.42□□□□□ -1.22
SYNE2-213ENST00000554805 CCDC168Q8NDH2 2452 aa7.42□□□□□ -1.22
SYNE2-213ENST00000554805 FABP5P3A8MUU1 101 aa7.42□□□□□ -1.22
SYNE2-213ENST00000554805 SEC11AP67812 179 aa7.42□□□□□ -1.22
SYNE2-213ENST00000554805 LGALS9BQ3B8N2 356 aa7.42□□□□□ -1.22
SYNE2-213ENST00000554805 LGALS9CQ6DKI2 356 aa7.42□□□□□ -1.22
SYNE2-213ENST00000554805 ZNF493Q6ZR52 646 aa7.42□□□□□ -1.22
SYNE2-213ENST00000554805 NPBQ8NG41 125 aa7.42□□□□□ -1.22
SYNE2-213ENST00000554805 OR11H6Q8NGC7 330 aa7.42□□□□□ -1.22
SYNE2-213ENST00000554805 DKK2Q9UBU2 259 aa7.42□□□□□ -1.22
SYNE2-213ENST00000554805 UFC1Q9Y3C8 167 aa7.42□□□□□ -1.22
SYNE2-213ENST00000554805 A0A096LNJ9 63 aa7.41□□□□□ -1.22
SYNE2-213ENST00000554805 GAGE12BA1L429 117 aa7.41□□□□□ -1.22
SYNE2-213ENST00000554805 NDUFS7O75251 213 aa7.41□□□□□ -1.22
SYNE2-213ENST00000554805 NDUFA3O95167 84 aa7.41□□□□□ -1.22
SYNE2-213ENST00000554805 S100A7P31151 101 aa7.41□□□□□ -1.22
SYNE2-213ENST00000554805 OCIAD2Q56VL3 154 aa7.41□□□□□ -1.22
SYNE2-213ENST00000554805 DYNAPQ8N1N2 210 aa7.41□□□□□ -1.22
SYNE2-213ENST00000554805 USP9XQ93008 2570 aaPredicted RBP7.41□□□□□ -1.22
SYNE2-213ENST00000554805 J3KRW8 73 aa7.41□□□□□ -1.22
SYNE2-213ENST00000554805 OVOL3O00110 214 aa7.41□□□□□ -1.22
SYNE2-213ENST00000554805 SMAD7O15105 426 aaKnown RBP7.41□□□□□ -1.22
SYNE2-213ENST00000554805 CLEC3BP05452 202 aa7.41□□□□□ -1.22
SYNE2-213ENST00000554805 GTF2H5Q6ZYL4 71 aa7.41□□□□□ -1.22
SYNE2-213ENST00000554805 PCP2Q8IVA1 136 aa7.41□□□□□ -1.22
SYNE2-213ENST00000554805 TMEM190Q8WZ59 177 aa7.41□□□□□ -1.22
SYNE2-213ENST00000554805 FLNCQ14315 2725 aa7.41□□□□□ -1.22
SYNE2-213ENST00000554805 MYO9AB2RTY4 2548 aa7.41□□□□□ -1.22
SYNE2-213ENST00000554805 CTSGP08311 255 aa7.4□□□□□ -1.22
SYNE2-213ENST00000554805 GATA1P15976 413 aaPredicted RBP7.4□□□□□ -1.22
SYNE2-213ENST00000554805 GCSHP23434 173 aa7.4□□□□□ -1.22
SYNE2-213ENST00000554805 CDKN1BP46527 198 aa7.4□□□□□ -1.22
SYNE2-213ENST00000554805 KIR3DS1Q14943 382 aa7.4□□□□□ -1.22
SYNE2-213ENST00000554805 C15orf32Q32M92 178 aa7.4□□□□□ -1.22
SYNE2-213ENST00000554805 SMIM15Q7Z3B0 74 aa7.4□□□□□ -1.22
SYNE2-213ENST00000554805 LY6G5BQ8NDX9 201 aa7.4□□□□□ -1.22
SYNE2-213ENST00000554805 PRAC2D3DTV9 90 aa7.4□□□□□ -1.22
SYNE2-213ENST00000554805 CLEC19AQ6UXS0 136 aa7.4□□□□□ -1.22
SYNE2-213ENST00000554805 TTC9CQ8N5M4 171 aa7.4□□□□□ -1.22
SYNE2-213ENST00000554805 M0R1W7 72 aa7.4□□□□□ -1.23
SYNE2-213ENST00000554805 GOSR1O95249 250 aa7.4□□□□□ -1.23
SYNE2-213ENST00000554805 OR1N2Q8NGR9 330 aa7.4□□□□□ -1.23
SYNE2-213ENST00000554805 FOXC2Q99958 501 aa7.4□□□□□ -1.23
SYNE2-213ENST00000554805 ABCA12Q86UK0 2595 aa7.4□□□□□ -1.23
SYNE2-213ENST00000554805 SONP18583 2426 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms