RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 LOC107984156A0A0G2JMH3 177 aa0.73□□□□□ -2.29
SCFD1-213ENST00000554776 LOC107984640A0A0U1RRK4 108 aa0.73□□□□□ -2.29
SCFD1-213ENST00000554776 GNG14A0A1W2PPG7 69 aa0.73□□□□□ -2.29
SCFD1-213ENST00000554776 FAM107AO95990 144 aa0.73□□□□□ -2.29
SCFD1-213ENST00000554776 RPS3P23396 243 aaKnown RBP eCLIP0.73□□□□□ -2.29
SCFD1-213ENST00000554776 MAXP61244 160 aa0.73□□□□□ -2.29
SCFD1-213ENST00000554776 GLIPR1L1Q6UWM5 242 aa0.73□□□□□ -2.29
SCFD1-213ENST00000554776 CASC2Q6XLA1 102 aa0.73□□□□□ -2.29
SCFD1-213ENST00000554776 ARL17AQ8IVW1 177 aa0.73□□□□□ -2.29
SCFD1-213ENST00000554776 CCL4L1Q8NHW4 92 aa0.73□□□□□ -2.29
SCFD1-213ENST00000554776 MCEEQ96PE7 176 aa0.73□□□□□ -2.29
SCFD1-213ENST00000554776 CNTRLQ7Z7A1 2325 aa0.73□□□□□ -2.29
SCFD1-213ENST00000554776 ASCC3Q8N3C0 2202 aaKnown RBP0.72□□□□□ -2.29
SCFD1-213ENST00000554776 ZCCHC11Q5TAX3 1644 aaKnown RBP0.72□□□□□ -2.29
SCFD1-213ENST00000554776 TRBV27A0A0K0K1C4 114 aa0.72□□□□□ -2.29
SCFD1-213ENST00000554776 H3BMG7 143 aa0.72□□□□□ -2.29
SCFD1-213ENST00000554776 IGLV3-1P01715 115 aa0.72□□□□□ -2.29
SCFD1-213ENST00000554776 TRACP01848 142 aa0.72□□□□□ -2.29
SCFD1-213ENST00000554776 TPT1P13693 172 aaKnown RBP0.72□□□□□ -2.29
SCFD1-213ENST00000554776 CRYGSP22914 178 aa0.72□□□□□ -2.29
SCFD1-213ENST00000554776 FOXA3P55318 350 aaPredicted RBP0.72□□□□□ -2.29
SCFD1-213ENST00000554776 SPATA45Q537H7 98 aa0.72□□□□□ -2.29
SCFD1-213ENST00000554776 OCIAD2Q56VL3 154 aa0.72□□□□□ -2.29
SCFD1-213ENST00000554776 OR5AK2Q8NH90 309 aa0.72□□□□□ -2.29
SCFD1-213ENST00000554776 LXNQ9BS40 222 aa0.72□□□□□ -2.29
SCFD1-213ENST00000554776 DDA1Q9BW61 102 aa0.72□□□□□ -2.29
SCFD1-213ENST00000554776 CBLN4Q9NTU7 201 aa0.72□□□□□ -2.29
SCFD1-213ENST00000554776 CITO14578 2027 aa0.72□□□□□ -2.29
SCFD1-213ENST00000554776 BCL9O00512 1426 aa0.72□□□□□ -2.29
SCFD1-213ENST00000554776 FAM135BQ49AJ0 1406 aa0.72□□□□□ -2.29
SCFD1-213ENST00000554776 PTPRDP23468 1912 aa0.72□□□□□ -2.29
SCFD1-213ENST00000554776 MED12Q93074 2177 aa0.72□□□□□ -2.29
SCFD1-213ENST00000554776 FER1L6Q2WGJ9 1857 aa0.71□□□□□ -2.3
SCFD1-213ENST00000554776 TANC2Q9HCD6 1990 aa0.71□□□□□ -2.3
SCFD1-213ENST00000554776 PRORSD1PA6NEY8 169 aa0.71□□□□□ -2.3
SCFD1-213ENST00000554776 NUPR2A6NF83 97 aa0.71□□□□□ -2.3
SCFD1-213ENST00000554776 TSTD3H0UI37 97 aa0.71□□□□□ -2.3
SCFD1-213ENST00000554776 SBSPONQ8IVN8 264 aa0.71□□□□□ -2.3
SCFD1-213ENST00000554776 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.71□□□□□ -2.3
SCFD1-213ENST00000554776 TMEM35BQ8NCS4 154 aa0.71□□□□□ -2.3
SCFD1-213ENST00000554776 MORN4Q8NDC4 146 aa0.71□□□□□ -2.3
SCFD1-213ENST00000554776 OR9Q1Q8NGQ5 310 aa0.71□□□□□ -2.3
SCFD1-213ENST00000554776 NABP2Q9BQ15 211 aa0.71□□□□□ -2.3
SCFD1-213ENST00000554776 ZGRF1Q86YA3 2104 aa0.71□□□□□ -2.3
SCFD1-213ENST00000554776 USP54Q70EL1 1684 aa0.7□□□□□ -2.3
SCFD1-213ENST00000554776 FXYD4P59646 89 aa0.7□□□□□ -2.3
SCFD1-213ENST00000554776 TOMM20LQ6UXN7 152 aa0.7□□□□□ -2.3
SCFD1-213ENST00000554776 OR51A4Q8NGJ6 313 aa0.7□□□□□ -2.3
SCFD1-213ENST00000554776 OR10AC1Q8NH08 325 aa0.7□□□□□ -2.3
SCFD1-213ENST00000554776 LPAR5Q9H1C0 372 aa0.7□□□□□ -2.3
SCFD1-213ENST00000554776 TRBV7-6A0A0J9YX20 115 aa0.69□□□□□ -2.3
SCFD1-213ENST00000554776 IGHV3-33P01772 117 aa0.69□□□□□ -2.3
SCFD1-213ENST00000554776 SLC25A4P12235 298 aa0.69□□□□□ -2.3
SCFD1-213ENST00000554776 RPL37AP61513 92 aaKnown RBP0.69□□□□□ -2.3
SCFD1-213ENST00000554776 KRTAP5-10Q6L8G5 202 aa0.69□□□□□ -2.3
SCFD1-213ENST00000554776 Q86TA4 180 aa0.69□□□□□ -2.3
SCFD1-213ENST00000554776 TAC4Q86UU9 113 aa0.69□□□□□ -2.3
SCFD1-213ENST00000554776 C5orf17Q8NAS9 161 aa0.69□□□□□ -2.3
SCFD1-213ENST00000554776 FGD6Q6ZV73 1430 aa0.69□□□□□ -2.3
SCFD1-213ENST00000554776 AHNAK2Q8IVF2 5795 aa0.69□□□□□ -2.3
SCFD1-213ENST00000554776 A2MP01023 1474 aa0.68□□□□□ -2.3
SCFD1-213ENST00000554776 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.68□□□□□ -2.3
SCFD1-213ENST00000554776 LOC107986453A0A1B0GWG9 222 aa0.68□□□□□ -2.3
SCFD1-213ENST00000554776 J3KT08 172 aa0.68□□□□□ -2.3
SCFD1-213ENST00000554776 NBEAP1P0C6P0 100 aa0.68□□□□□ -2.3
SCFD1-213ENST00000554776 SAA1P0DJI8 122 aaPredicted RBP0.68□□□□□ -2.3
SCFD1-213ENST00000554776 BLCAPP62952 87 aa0.68□□□□□ -2.3
SCFD1-213ENST00000554776 CSAG1Q6PB30 78 aa0.68□□□□□ -2.3
SCFD1-213ENST00000554776 TMEM229BQ8NBD8 167 aa0.68□□□□□ -2.3
SCFD1-213ENST00000554776 SKA2Q8WVK7 121 aaPredicted RBP0.68□□□□□ -2.3
SCFD1-213ENST00000554776 CIB3Q96Q77 187 aaPredicted RBP0.68□□□□□ -2.3
SCFD1-213ENST00000554776 GINS2Q9Y248 185 aa0.68□□□□□ -2.3
SCFD1-213ENST00000554776 ANK1P16157 1881 aa0.67□□□□□ -2.3
SCFD1-213ENST00000554776 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.67□□□□□ -2.3
SCFD1-213ENST00000554776 ZNF727A8MUV8 499 aa0.67□□□□□ -2.3
SCFD1-213ENST00000554776 CDC42EP2O14613 210 aa0.67□□□□□ -2.3
SCFD1-213ENST00000554776 EDF1O60869 148 aaKnown RBP0.67□□□□□ -2.3
SCFD1-213ENST00000554776 MT-ND4LP03901 98 aa0.67□□□□□ -2.3
SCFD1-213ENST00000554776 SDC4P31431 198 aa0.67□□□□□ -2.3
SCFD1-213ENST00000554776 DR1Q01658 176 aa0.67□□□□□ -2.3
SCFD1-213ENST00000554776 LINC00575Q6W349 94 aa0.67□□□□□ -2.3
SCFD1-213ENST00000554776 LINC00299Q6ZSB3 139 aa0.67□□□□□ -2.3
SCFD1-213ENST00000554776 HSPB8Q9UJY1 196 aa0.67□□□□□ -2.3
SCFD1-213ENST00000554776 BOKQ9UMX3 212 aaPredicted RBP0.67□□□□□ -2.3
SCFD1-213ENST00000554776 MUC4Q99102 2169 aa0.67□□□□□ -2.3
SCFD1-213ENST00000554776 ANKRD30AQ9BXX3 1397 aa0.67□□□□□ -2.3
SCFD1-213ENST00000554776 DSPPQ9NZW4 1301 aa0.66□□□□□ -2.3
SCFD1-213ENST00000554776 XIRP1Q702N8 1843 aaKnown RBP0.66□□□□□ -2.3
SCFD1-213ENST00000554776 OVOS2A0A0G2JMS6 1433 aa0.66□□□□□ -2.3
SCFD1-213ENST00000554776 A0A1W2PPM0 123 aa0.66□□□□□ -2.3
SCFD1-213ENST00000554776 BBIP1A8MTZ0 92 aa0.66□□□□□ -2.3
SCFD1-213ENST00000554776 HBDP02042 147 aa0.66□□□□□ -2.3
SCFD1-213ENST00000554776 TCRAP04437 139 aa0.66□□□□□ -2.3
SCFD1-213ENST00000554776 SLC25A5P05141 298 aaKnown RBP0.66□□□□□ -2.3
SCFD1-213ENST00000554776 PDE6GP18545 87 aa0.66□□□□□ -2.3
SCFD1-213ENST00000554776 RPL22P35268 128 aaKnown RBP0.66□□□□□ -2.3
SCFD1-213ENST00000554776 GTF2A1P52655 376 aaPredicted RBP0.66□□□□□ -2.3
SCFD1-213ENST00000554776 QRFPP83859 136 aa0.66□□□□□ -2.3
SCFD1-213ENST00000554776 OR8B8Q15620 311 aa0.66□□□□□ -2.3
SCFD1-213ENST00000554776 AKAP14Q86UN6 197 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms