RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 PYY3Q5JQD4 70 aa9.76□□□□□ -0.85
VIPAS39-206ENST00000553888 ACTL10Q5JWF8 245 aa9.76□□□□□ -0.85
VIPAS39-206ENST00000553888 MRPL54Q6P161 138 aaKnown RBP9.76□□□□□ -0.85
VIPAS39-206ENST00000553888 Q8TAT8 98 aa9.76□□□□□ -0.85
VIPAS39-206ENST00000553888 ZC2HC1AQ96GY0 325 aa9.76□□□□□ -0.85
VIPAS39-206ENST00000553888 USMG5Q96IX5 58 aa9.76□□□□□ -0.85
VIPAS39-206ENST00000553888 H3BUA1 57 aa9.76□□□□□ -0.85
VIPAS39-206ENST00000553888 PDE6HQ13956 83 aa9.76□□□□□ -0.85
VIPAS39-206ENST00000553888 LYPD1Q8N2G4 141 aa9.76□□□□□ -0.85
VIPAS39-206ENST00000553888 VGLL1Q99990 258 aa9.76□□□□□ -0.85
VIPAS39-206ENST00000553888 ZNF331Q9NQX6 463 aaPredicted RBP9.76□□□□□ -0.85
VIPAS39-206ENST00000553888 PSG8Q9UQ74 426 aa9.76□□□□□ -0.85
VIPAS39-206ENST00000553888 CHEK1O14757 476 aa9.75□□□□□ -0.85
VIPAS39-206ENST00000553888 GZMBP10144 247 aa9.75□□□□□ -0.85
VIPAS39-206ENST00000553888 PSG3Q16557 428 aa9.75□□□□□ -0.85
VIPAS39-206ENST00000553888 GLMPQ8WWB7 406 aa9.75□□□□□ -0.85
VIPAS39-206ENST00000553888 IGKV3-7A0A075B6H7 116 aa9.75□□□□□ -0.85
VIPAS39-206ENST00000553888 A0A1B0GUS0 222 aa9.75□□□□□ -0.85
VIPAS39-206ENST00000553888 PKIAP61925 76 aa9.75□□□□□ -0.85
VIPAS39-206ENST00000553888 RPL19P84098 196 aaKnown RBP9.75□□□□□ -0.85
VIPAS39-206ENST00000553888 TRAPPC1Q9Y5R8 145 aa9.75□□□□□ -0.85
VIPAS39-206ENST00000553888 SETD2Q9BYW2 2564 aaPredicted RBP9.74□□□□□ -0.85
VIPAS39-206ENST00000553888 IFITM10A6NMD0 228 aa9.74□□□□□ -0.85
VIPAS39-206ENST00000553888 SIVA1O15304 175 aa9.74□□□□□ -0.85
VIPAS39-206ENST00000553888 ERCC8Q13216 396 aa9.74□□□□□ -0.85
VIPAS39-206ENST00000553888 TCF24Q7RTU0 167 aa9.74□□□□□ -0.85
VIPAS39-206ENST00000553888 TMEM75Q8N9X5 138 aa9.74□□□□□ -0.85
VIPAS39-206ENST00000553888 SMR3AQ99954 134 aa9.74□□□□□ -0.85
VIPAS39-206ENST00000553888 PRSS22Q9GZN4 317 aa9.74□□□□□ -0.85
VIPAS39-206ENST00000553888 U3KQE9 123 aa9.74□□□□□ -0.85
VIPAS39-206ENST00000553888 SMIM27A0A1W2PRY6 76 aa9.74□□□□□ -0.85
VIPAS39-206ENST00000553888 PSG9Q00887 426 aa9.74□□□□□ -0.85
VIPAS39-206ENST00000553888 TMEM183AQ8IXX5 376 aa9.74□□□□□ -0.85
VIPAS39-206ENST00000553888 CRIP1P50238 77 aa9.73□□□□□ -0.85
VIPAS39-206ENST00000553888 C18orf65Q6ZTR6 163 aa9.73□□□□□ -0.85
VIPAS39-206ENST00000553888 FAM231DQ6ZW35 169 aa9.73□□□□□ -0.85
VIPAS39-206ENST00000553888 TPPP3Q9BW30 176 aa9.73□□□□□ -0.85
VIPAS39-206ENST00000553888 TNFRSF18Q9Y5U5 241 aa9.73□□□□□ -0.85
VIPAS39-206ENST00000553888 TRAV26-1A0A087WT03 109 aa9.73□□□□□ -0.85
VIPAS39-206ENST00000553888 TRAV8-2A0A0B4J237 113 aa9.73□□□□□ -0.85
VIPAS39-206ENST00000553888 C19orf71A6NCJ1 209 aa9.73□□□□□ -0.85
VIPAS39-206ENST00000553888 NDUFA4O00483 81 aa9.73□□□□□ -0.85
VIPAS39-206ENST00000553888 DEFB1P60022 68 aa9.73□□□□□ -0.85
VIPAS39-206ENST00000553888 BTF3L4Q96K17 158 aa9.73□□□□□ -0.85
VIPAS39-206ENST00000553888 NPFFR1Q9GZQ6 430 aa9.73□□□□□ -0.85
VIPAS39-206ENST00000553888 A0A0G2JLM5 398 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 SRD5A1P18405 259 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 LCN12Q6JVE5 192 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 C8orf86Q6ZUL3 223 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 NUP35Q8NFH5 326 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 GEMIN7Q9H840 131 aaKnown RBP9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 YAE1D1Q9NRH1 226 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 CSN1S1P47710 185 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 PTTG1IPP53801 180 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 GRAMD2BQ96HH9 432 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 PEF1Q9UBV8 284 aaKnown RBP9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 A0A087X0K7 114 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 FAM181BA6NEQ2 426 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 HIGD1CA8MV81 97 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 SNURFLB1AK76 121 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 P01737 135 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 ZNF705DP0CH99 300 aaPredicted RBP9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 ZNF705BP0CI00 300 aaPredicted RBP9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 GPHB5Q86YW7 130 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 GBGT1Q8N5D6 347 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 GTSF1Q8WW33 167 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 SNHG12Q9BXW3 62 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 RPP21Q9H633 154 aaKnown RBP9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 ESM1Q9NQ30 184 aa9.72□□□□□ -0.85
VIPAS39-206ENST00000553888 OTOGQ6ZRI0 2925 aa9.71□□□□□ -0.85
VIPAS39-206ENST00000553888 GRIFINA4D1Z8 144 aa9.71□□□□□ -0.85
VIPAS39-206ENST00000553888 K7EQM0 130 aa9.71□□□□□ -0.85
VIPAS39-206ENST00000553888 HOXA5P20719 270 aa9.71□□□□□ -0.85
VIPAS39-206ENST00000553888 KIAA1644Q3SXP7 199 aa9.71□□□□□ -0.85
VIPAS39-206ENST00000553888 TMEM190Q8WZ59 177 aa9.71□□□□□ -0.85
VIPAS39-206ENST00000553888 FOXC2Q99958 501 aa9.71□□□□□ -0.85
VIPAS39-206ENST00000553888 MRPL18Q9H0U6 180 aaKnown RBP9.71□□□□□ -0.85
VIPAS39-206ENST00000553888 C20orf173Q96LM9 149 aa9.71□□□□□ -0.86
VIPAS39-206ENST00000553888 SORL1Q92673 2214 aa9.71□□□□□ -0.86
VIPAS39-206ENST00000553888 RPL11P62913 178 aaKnown RBP9.7□□□□□ -0.86
VIPAS39-206ENST00000553888 DEFB136Q30KP8 78 aa9.7□□□□□ -0.86
VIPAS39-206ENST00000553888 C1orf194Q5T5A4 169 aa9.7□□□□□ -0.86
VIPAS39-206ENST00000553888 GDF5OSQ5U4N7 250 aa9.7□□□□□ -0.86
VIPAS39-206ENST00000553888 TSKUQ8WUA8 353 aa9.7□□□□□ -0.86
VIPAS39-206ENST00000553888 IZUMO1RA6ND01 250 aa9.7□□□□□ -0.86
VIPAS39-206ENST00000553888 DNAJC9-AS1A6NH13 148 aa9.7□□□□□ -0.86
VIPAS39-206ENST00000553888 M0QZ24 198 aa9.7□□□□□ -0.86
VIPAS39-206ENST00000553888 SNAI2O43623 268 aa9.7□□□□□ -0.86
VIPAS39-206ENST00000553888 ZNF80P51504 273 aaPredicted RBP9.7□□□□□ -0.86
VIPAS39-206ENST00000553888 ERASQ7Z444 233 aa9.7□□□□□ -0.86
VIPAS39-206ENST00000553888 OR2D3Q8NGH3 330 aa9.7□□□□□ -0.86
VIPAS39-206ENST00000553888 SMIM12Q96EX1 92 aa9.7□□□□□ -0.86
VIPAS39-206ENST00000553888 PGLYRP4Q96LB8 373 aa9.7□□□□□ -0.86
VIPAS39-206ENST00000553888 ZNF492Q9P255 531 aa9.7□□□□□ -0.86
VIPAS39-206ENST00000553888 ZNF580Q9UK33 172 aa9.7□□□□□ -0.86
VIPAS39-206ENST00000553888 TMSB15BA0A087X1C1 80 aa9.69□□□□□ -0.86
VIPAS39-206ENST00000553888 TMEM160Q9NX00 188 aa9.69□□□□□ -0.86
VIPAS39-206ENST00000553888 WNK1Q9H4A3 2382 aa9.69□□□□□ -0.86
VIPAS39-206ENST00000553888 ZNF253O75346 499 aa9.69□□□□□ -0.86
VIPAS39-206ENST00000553888 TMEM136Q6ZRR5 245 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms