RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 NKX6-2Q9C056 277 aaPredicted RBP10.08□□□□□ -0.8
TUBB3-202ENST00000553656 TRAV12-2A0A075B6T6 113 aa10.07□□□□□ -0.8
TUBB3-202ENST00000553656 SERTM2A0A1B0GWG4 89 aa10.07□□□□□ -0.8
TUBB3-202ENST00000553656 GGTLC3B5MD39 225 aa10.07□□□□□ -0.8
TUBB3-202ENST00000553656 IFNA7P01567 189 aa10.07□□□□□ -0.8
TUBB3-202ENST00000553656 HBE1P02100 147 aa10.07□□□□□ -0.8
TUBB3-202ENST00000553656 CT45A10P0DMU9 189 aa10.07□□□□□ -0.8
TUBB3-202ENST00000553656 PPT1P50897 306 aa10.07□□□□□ -0.8
TUBB3-202ENST00000553656 ZNF138P52744 262 aa10.07□□□□□ -0.8
TUBB3-202ENST00000553656 GOLT1AQ6ZVE7 132 aa10.07□□□□□ -0.8
TUBB3-202ENST00000553656 WWC2-AS2Q96NR7 200 aa10.07□□□□□ -0.8
TUBB3-202ENST00000553656 VGLL1Q99990 258 aa10.07□□□□□ -0.8
TUBB3-202ENST00000553656 AGPAT4-IT1Q9H0P7 198 aa10.07□□□□□ -0.8
TUBB3-202ENST00000553656 BOLA1Q9Y3E2 137 aa10.07□□□□□ -0.8
TUBB3-202ENST00000553656 ZNF705EA8MWA4 302 aaPredicted RBP10.06□□□□□ -0.8
TUBB3-202ENST00000553656 J3KRW8 73 aa10.06□□□□□ -0.8
TUBB3-202ENST00000553656 MIFP14174 115 aa10.06□□□□□ -0.8
TUBB3-202ENST00000553656 GNG5P63218 68 aa10.06□□□□□ -0.8
TUBB3-202ENST00000553656 CST9LP1Q5W188 147 aa10.06□□□□□ -0.8
TUBB3-202ENST00000553656 ALKAL2Q6UX46 152 aa10.06□□□□□ -0.8
TUBB3-202ENST00000553656 YTHDF2Q9Y5A9 579 aaKnown RBP10.06□□□□□ -0.8
TUBB3-202ENST00000553656 ARL2-SNX15V9GYD0 113 aa10.06□□□□□ -0.8
TUBB3-202ENST00000553656 HUWE1Q7Z6Z7 4374 aaKnown RBP10.06□□□□□ -0.8
TUBB3-202ENST00000553656 TGP01266 2768 aa10.05□□□□□ -0.8
TUBB3-202ENST00000553656 A0A0J9YWU9 116 aa10.05□□□□□ -0.8
TUBB3-202ENST00000553656 SMIM9A6NGZ8 99 aa10.05□□□□□ -0.8
TUBB3-202ENST00000553656 FAM74A7A6NL05 159 aa10.05□□□□□ -0.8
TUBB3-202ENST00000553656 CRXO43186 299 aaPredicted RBP10.05□□□□□ -0.8
TUBB3-202ENST00000553656 TCRAP04437 139 aa10.05□□□□□ -0.8
TUBB3-202ENST00000553656 ZNF705AQ6ZN79 300 aaPredicted RBP10.05□□□□□ -0.8
TUBB3-202ENST00000553656 TMEM256Q8N2U0 113 aa10.05□□□□□ -0.8
TUBB3-202ENST00000553656 Q8TAT8 98 aa10.05□□□□□ -0.8
TUBB3-202ENST00000553656 C20orf144Q9BQM9 153 aa10.05□□□□□ -0.8
TUBB3-202ENST00000553656 ATG101Q9BSB4 218 aa10.05□□□□□ -0.8
TUBB3-202ENST00000553656 ZNF492Q9P255 531 aa10.05□□□□□ -0.8
TUBB3-202ENST00000553656 EPDR1Q9UM22 224 aa10.05□□□□□ -0.8
TUBB3-202ENST00000553656 TRAV1-1A0A0B4J248 108 aa10.04□□□□□ -0.8
TUBB3-202ENST00000553656 F6UZH7 168 aa10.04□□□□□ -0.8
TUBB3-202ENST00000553656 PAGE4O60829 102 aa10.04□□□□□ -0.8
TUBB3-202ENST00000553656 GPX1P07203 203 aa10.04□□□□□ -0.8
TUBB3-202ENST00000553656 NMBP08949 121 aa10.04□□□□□ -0.8
TUBB3-202ENST00000553656 GFI1BQ5VTD9 330 aa10.04□□□□□ -0.8
TUBB3-202ENST00000553656 C1orf158Q8N1D5 194 aa10.04□□□□□ -0.8
TUBB3-202ENST00000553656 CYB561D1Q8N8Q1 229 aa10.04□□□□□ -0.8
TUBB3-202ENST00000553656 LINC01587Q99440 93 aa10.04□□□□□ -0.8
TUBB3-202ENST00000553656 NEU1Q99519 415 aa10.04□□□□□ -0.8
TUBB3-202ENST00000553656 TCEAL7Q9BRU2 100 aa10.04□□□□□ -0.8
TUBB3-202ENST00000553656 NIPSNAP3BQ9BS92 247 aa10.04□□□□□ -0.8
TUBB3-202ENST00000553656 NDFIP1Q9BT67 221 aa10.04□□□□□ -0.8
TUBB3-202ENST00000553656 EDA2RQ9HAV5 297 aa10.04□□□□□ -0.8
TUBB3-202ENST00000553656 X6R8D5 127 aa10.04□□□□□ -0.8
TUBB3-202ENST00000553656 IGHV4-28A0A0C4DH34 117 aa10.03□□□□□ -0.8
TUBB3-202ENST00000553656 TRBV7-9A0A0J9YWB2 115 aa10.03□□□□□ -0.8
TUBB3-202ENST00000553656 C7orf71A4D174 169 aa10.03□□□□□ -0.8
TUBB3-202ENST00000553656 FBLL1A6NHQ2 334 aaKnown RBP10.03□□□□□ -0.8
TUBB3-202ENST00000553656 H7BYZ3 331 aa10.03□□□□□ -0.8
TUBB3-202ENST00000553656 IFNA1P01562 189 aa10.03□□□□□ -0.8
TUBB3-202ENST00000553656 CRISP2P16562 243 aa10.03□□□□□ -0.8
TUBB3-202ENST00000553656 RRN3P1Q2M238 152 aa10.03□□□□□ -0.8
TUBB3-202ENST00000553656 HIST1H2BAQ96A08 127 aa10.03□□□□□ -0.8
TUBB3-202ENST00000553656 C11orf68Q9H3H3 251 aaKnown RBP10.03□□□□□ -0.8
TUBB3-202ENST00000553656 MANBALQ9NQG1 85 aa10.03□□□□□ -0.8
TUBB3-202ENST00000553656 GNG13Q9P2W3 67 aa10.03□□□□□ -0.8
TUBB3-202ENST00000553656 LENEPQ9Y5L5 61 aa10.03□□□□□ -0.8
TUBB3-202ENST00000553656 NBEAL2Q6ZNJ1 2754 aa10.02□□□□□ -0.81
TUBB3-202ENST00000553656 TRAV12-3A0A0B4J271 114 aa10.02□□□□□ -0.81
TUBB3-202ENST00000553656 PEX7O00628 323 aa10.02□□□□□ -0.81
TUBB3-202ENST00000553656 DEFB4AO15263 64 aa10.02□□□□□ -0.81
TUBB3-202ENST00000553656 RNASE4P34096 147 aaKnown RBP10.02□□□□□ -0.81
TUBB3-202ENST00000553656 BLOC1S1P78537 153 aa10.02□□□□□ -0.81
TUBB3-202ENST00000553656 Q8NAQ8 132 aa10.02□□□□□ -0.81
TUBB3-202ENST00000553656 IL17DQ8TAD2 202 aa10.02□□□□□ -0.81
TUBB3-202ENST00000553656 FAM19A4Q96LR4 140 aa10.02□□□□□ -0.81
TUBB3-202ENST00000553656 COL7A1Q02388 2944 aa10.02□□□□□ -0.81
TUBB3-202ENST00000553656 TRAV8-1A0A0A6YYK1 113 aa10.01□□□□□ -0.81
TUBB3-202ENST00000553656 TMEM189A5PLL7 270 aa10.01□□□□□ -0.81
TUBB3-202ENST00000553656 KLLNB2CW77 178 aa10.01□□□□□ -0.81
TUBB3-202ENST00000553656 HTN1P15515 57 aa10.01□□□□□ -0.81
TUBB3-202ENST00000553656 ATP5G3P48201 142 aa10.01□□□□□ -0.81
TUBB3-202ENST00000553656 TAS2R60P59551 318 aa10.01□□□□□ -0.81
TUBB3-202ENST00000553656 BTN1A1Q13410 526 aa10.01□□□□□ -0.81
TUBB3-202ENST00000553656 KIR3DS1Q14943 382 aa10.01□□□□□ -0.81
TUBB3-202ENST00000553656 ZFAND2AQ8N6M9 145 aa10.01□□□□□ -0.81
TUBB3-202ENST00000553656 TMEM75Q8N9X5 138 aa10.01□□□□□ -0.81
TUBB3-202ENST00000553656 TREM1Q9NP99 234 aa10.01□□□□□ -0.81
TUBB3-202ENST00000553656 PSG8Q9UQ74 426 aa10.01□□□□□ -0.81
TUBB3-202ENST00000553656 LOC102723971A0A1B0GUV8 181 aa10□□□□□ -0.81
TUBB3-202ENST00000553656 ZNF705GA8MUZ8 300 aaPredicted RBP10□□□□□ -0.81
TUBB3-202ENST00000553656 C11orf94C9JXX5 98 aa10□□□□□ -0.81
TUBB3-202ENST00000553656 RBMY1A1P0DJD3 496 aaKnown RBP10□□□□□ -0.81
TUBB3-202ENST00000553656 RBMY1CP0DJD4 496 aa10□□□□□ -0.81
TUBB3-202ENST00000553656 EMP1P54849 157 aa10□□□□□ -0.81
TUBB3-202ENST00000553656 FLI1Q01543 452 aaPredicted RBP10□□□□□ -0.81
TUBB3-202ENST00000553656 RBMY1FQ15415 496 aaKnown RBP10□□□□□ -0.81
TUBB3-202ENST00000553656 PRNTQ86SH4 94 aa10□□□□□ -0.81
TUBB3-202ENST00000553656 CCDC28AQ8IWP9 274 aa10□□□□□ -0.81
TUBB3-202ENST00000553656 SGK494Q96LW2 274 aa10□□□□□ -0.81
TUBB3-202ENST00000553656 PYGO2Q9BRQ0 406 aa10□□□□□ -0.81
TUBB3-202ENST00000553656 TENM3Q9P273 2699 aa10□□□□□ -0.81
TUBB3-202ENST00000553656 AKR1C3P42330 323 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms