RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 MYH8P13535 1937 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 HELZP42694 1942 aaKnown RBP2.36□□□□□ -2.03
TDP1-207ENST00000553617 MYLKQ15746 1914 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 PLXNB3Q9ULL4 1909 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 MAGI3Q5TCQ9 1506 aa2.36□□□□□ -2.03
TDP1-207ENST00000553617 IGHV3-21A0A0B4J1V1 117 aa2.35□□□□□ -2.03
TDP1-207ENST00000553617 K7ERS5 55 aa2.35□□□□□ -2.03
TDP1-207ENST00000553617 M0R233 179 aa2.35□□□□□ -2.03
TDP1-207ENST00000553617 SSSCA1O60232 199 aa2.35□□□□□ -2.03
TDP1-207ENST00000553617 YPEL1O60688 119 aa2.35□□□□□ -2.03
TDP1-207ENST00000553617 CFDP00746 253 aaPredicted RBP2.35□□□□□ -2.03
TDP1-207ENST00000553617 CD28P10747 220 aa2.35□□□□□ -2.03
TDP1-207ENST00000553617 COX6A1P12074 109 aa2.35□□□□□ -2.03
TDP1-207ENST00000553617 FUSP35637 526 aaKnown RBP eCLIP2.35□□□□□ -2.03
TDP1-207ENST00000553617 HINT1P49773 126 aaPredicted RBP2.35□□□□□ -2.03
TDP1-207ENST00000553617 CIRBPQ14011 172 aaKnown RBP2.35□□□□□ -2.03
TDP1-207ENST00000553617 LUZP6Q538Z0 58 aa2.35□□□□□ -2.03
TDP1-207ENST00000553617 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
TDP1-207ENST00000553617 OR5AS1Q8N127 324 aa2.35□□□□□ -2.03
TDP1-207ENST00000553617 FAM216BQ8N7L0 139 aa2.35□□□□□ -2.03
TDP1-207ENST00000553617 VSTM2AQ8TAG5 236 aa2.35□□□□□ -2.03
TDP1-207ENST00000553617 TTTY13Q9BZ97 58 aa2.35□□□□□ -2.03
TDP1-207ENST00000553617 CCDC88CQ9P219 2028 aa2.35□□□□□ -2.03
TDP1-207ENST00000553617 ADGRB1O14514 1584 aa2.35□□□□□ -2.03
TDP1-207ENST00000553617 SBF2Q86WG5 1849 aa2.35□□□□□ -2.03
TDP1-207ENST00000553617 CASKIN1Q8WXD9 1431 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 SCN9AQ15858 1988 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 SCN8AQ9UQD0 1980 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 ADGRL1O94910 1474 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 DISP1Q96F81 1524 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 BRWD3Q6RI45 1802 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 A0A087WXM4 84 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 IGHV1-3A0A0C4DH29 117 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 ZNF705FA8MVS1 300 aaPredicted RBP2.34□□□□□ -2.03
TDP1-207ENST00000553617 PROSCO94903 275 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 TCL1BO95988 128 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 IGHV3-7P01780 117 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 ZNF705BP0CI00 300 aaPredicted RBP2.34□□□□□ -2.03
TDP1-207ENST00000553617 POLR2JP52435 117 aaKnown RBP2.34□□□□□ -2.03
TDP1-207ENST00000553617 FXYD7P58549 80 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 SEC11AP67812 179 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 SS18Q15532 418 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 PATE2Q6UY27 113 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 DPPA3Q6W0C5 159 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 HEPN1Q6WQI6 88 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 FP248Q71RG6 208 aaPredicted RBP2.34□□□□□ -2.03
TDP1-207ENST00000553617 ZFAND2AQ8N6M9 145 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 SIGLECL1Q8N7X8 197 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 SPANXA2-OT1Q8N9U9 137 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 OR2T35Q8NGX2 323 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 SCGB3A1Q96QR1 104 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 PMCHL2Q9BQD1 86 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 DPH3P1Q9H4G8 78 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 ST20Q9HBF5 79 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 TAS2R4Q9NYW5 299 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 RABAC1Q9UI14 185 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 KLK12Q9UKR0 248 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 HHLA3Q9XRX5 114 aa2.34□□□□□ -2.03
TDP1-207ENST00000553617 MED1Q15648 1581 aaPredicted RBP2.34□□□□□ -2.03
TDP1-207ENST00000553617 MYH1P12882 1939 aa2.34□□□□□ -2.04
TDP1-207ENST00000553617 MCM3APO60318 1980 aa2.34□□□□□ -2.04
TDP1-207ENST00000553617 PLIN4Q96Q06 1357 aa2.34□□□□□ -2.04
TDP1-207ENST00000553617 POLR1AO95602 1720 aaPredicted RBP2.34□□□□□ -2.04
TDP1-207ENST00000553617 ABCC5O15440 1437 aa2.34□□□□□ -2.04
TDP1-207ENST00000553617 SNRNP200O75643 2136 aaKnown RBP2.33□□□□□ -2.04
TDP1-207ENST00000553617 MLH3Q9UHC1 1453 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 NUP98P52948 1817 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 ATAD5Q96QE3 1844 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 ANK1P16157 1881 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 CC2D2AQ9P2K1 1620 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 C3orf84H3BNL1 204 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 H3BRM9 83 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 TIMM17BO60830 172 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 SHBGP04278 402 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 CGB3P0DN86 165 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 CGB7P0DN87 165 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 IGLC2P0DOY2 106 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 IGLC3P0DOY3 106 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 IGHV3-30-3P0DP02 117 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 DYNLT1P63172 113 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 ZNF816Q0VGE8 651 aaPredicted RBP2.33□□□□□ -2.04
TDP1-207ENST00000553617 LINC00483Q53H64 154 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 IGFL3Q6UXB1 125 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 SLC25A26Q70HW3 274 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 SBSPONQ8IVN8 264 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 AMN1Q8IY45 258 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 OR10AG1Q8NH19 301 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 CLDND2Q8NHS1 167 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 C20orf78Q9BR46 151 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 GABARAPL1Q9H0R8 117 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 C11orf1Q9H5F2 150 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 TMEM242Q9NWH2 141 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 CACFD1Q9UGQ2 172 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 SPCS1Q9Y6A9 102 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 PLXNB1O43157 2135 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 PXDNLA1KZ92 1463 aa2.33□□□□□ -2.04
TDP1-207ENST00000553617 HEATR5AQ86XA9 2040 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 PPLO60437 1756 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 LTN1O94822 1766 aa2.32□□□□□ -2.04
TDP1-207ENST00000553617 TRAV1-1A0A0B4J248 108 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms