RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 DAZ2Q13117 558 aaKnown RBP8.9□□□□□ -0.98
LINC00643-202ENST00000553426 ASAH1Q13510 395 aa8.9□□□□□ -0.98
LINC00643-202ENST00000553426 TTC32Q5I0X7 151 aa8.9□□□□□ -0.98
LINC00643-202ENST00000553426 TMEM78Q5T7P6 136 aa8.9□□□□□ -0.98
LINC00643-202ENST00000553426 OR5C1Q8NGR4 320 aa8.9□□□□□ -0.98
LINC00643-202ENST00000553426 Q9H8V8 135 aa8.9□□□□□ -0.98
LINC00643-202ENST00000553426 MUC4Q99102 2169 aa8.9□□□□□ -0.98
LINC00643-202ENST00000553426 A0A0J9YY99 117 aa8.89□□□□□ -0.99
LINC00643-202ENST00000553426 H3BNG1 76 aa8.89□□□□□ -0.99
LINC00643-202ENST00000553426 PYYP10082 97 aa8.89□□□□□ -0.99
LINC00643-202ENST00000553426 RNASE4P34096 147 aaKnown RBP8.89□□□□□ -0.99
LINC00643-202ENST00000553426 CYCSP99999 105 aaKnown RBP8.89□□□□□ -0.99
LINC00643-202ENST00000553426 ERCC8Q13216 396 aa8.89□□□□□ -0.99
LINC00643-202ENST00000553426 EIF4E3Q8N5X7 224 aaKnown RBP8.89□□□□□ -0.99
LINC00643-202ENST00000553426 KLLNB2CW77 178 aa8.88□□□□□ -0.99
LINC00643-202ENST00000553426 C17orf112F2Z3M2 114 aa8.88□□□□□ -0.99
LINC00643-202ENST00000553426 NMBP08949 121 aa8.88□□□□□ -0.99
LINC00643-202ENST00000553426 NHLH2Q02577 135 aa8.88□□□□□ -0.99
LINC00643-202ENST00000553426 ICAM4Q14773 271 aa8.88□□□□□ -0.99
LINC00643-202ENST00000553426 LRRC37A5PQ49AS3 106 aa8.88□□□□□ -0.99
LINC00643-202ENST00000553426 Q6ZTI0 123 aa8.88□□□□□ -0.99
LINC00643-202ENST00000553426 EXOC3-AS1Q8N2X6 119 aa8.88□□□□□ -0.99
LINC00643-202ENST00000553426 THAP6Q8TBB0 222 aa8.88□□□□□ -0.99
LINC00643-202ENST00000553426 NMES1Q9C002 83 aa8.88□□□□□ -0.99
LINC00643-202ENST00000553426 AGPAT4-IT1Q9H0P7 198 aa8.88□□□□□ -0.99
LINC00643-202ENST00000553426 TRGV1A0A0A0MS02 117 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 C16orf90A8MZG2 172 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 RGS13O14921 159 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 PRAF2O60831 178 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 NDUFB4O95168 129 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 NBEAP1P0C6P0 100 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 HOXA5P20719 270 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 CSN1S1P47710 185 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 TNP2Q05952 138 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 ANXA2RQ3ZCQ2 193 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 GCSAMLQ5JQS6 135 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 FAM122CQ6P4D5 195 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 C9orf47Q6ZRZ4 202 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 ZNF575Q86XF7 245 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 LINC00467Q9BRT7 94 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 SLC25A2Q9BXI2 301 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 MRPL32Q9BYC8 188 aaKnown RBP8.87□□□□□ -0.99
LINC00643-202ENST00000553426 OR51M1Q9H341 326 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 TMPRSS5Q9H3S3 457 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 GSN-AS1Q9NRJ2 163 aa8.87□□□□□ -0.99
LINC00643-202ENST00000553426 HERC1Q15751 4861 aa8.86□□□□□ -0.99
LINC00643-202ENST00000553426 ZNF324O75467 553 aaPredicted RBP8.86□□□□□ -0.99
LINC00643-202ENST00000553426 SIX6O95475 246 aa8.86□□□□□ -0.99
LINC00643-202ENST00000553426 CRISP2P16562 243 aa8.86□□□□□ -0.99
LINC00643-202ENST00000553426 CD300CQ08708 224 aa8.86□□□□□ -0.99
LINC00643-202ENST00000553426 BTN1A1Q13410 526 aa8.86□□□□□ -0.99
LINC00643-202ENST00000553426 MIR17HGQ75NE6 70 aa8.86□□□□□ -0.99
LINC00643-202ENST00000553426 C18orf15Q96N68 181 aa8.86□□□□□ -0.99
LINC00643-202ENST00000553426 ARPC5LQ9BPX5 153 aa8.86□□□□□ -0.99
LINC00643-202ENST00000553426 PAXXQ9BUH6 204 aa8.86□□□□□ -0.99
LINC00643-202ENST00000553426 FUT9Q9Y231 359 aa8.86□□□□□ -0.99
LINC00643-202ENST00000553426 IGKV2-40A0A087WW87 121 aaPredicted RBP8.85□□□□□ -0.99
LINC00643-202ENST00000553426 A0A1W2PPQ1 181 aa8.85□□□□□ -0.99
LINC00643-202ENST00000553426 OR7C2O60412 319 aa8.85□□□□□ -0.99
LINC00643-202ENST00000553426 UPK1BO75841 260 aa8.85□□□□□ -0.99
LINC00643-202ENST00000553426 IGKV2D-40P01614 121 aaPredicted RBP8.85□□□□□ -0.99
LINC00643-202ENST00000553426 PET100P0DJ07 73 aa8.85□□□□□ -0.99
LINC00643-202ENST00000553426 ESRGQ1W209 222 aa8.85□□□□□ -0.99
LINC00643-202ENST00000553426 FAM19A4Q96LR4 140 aa8.85□□□□□ -0.99
LINC00643-202ENST00000553426 UPK3BQ9BT76 320 aa8.85□□□□□ -0.99
LINC00643-202ENST00000553426 WDR61Q9GZS3 305 aaKnown RBP8.85□□□□□ -0.99
LINC00643-202ENST00000553426 Q9H3A6 140 aa8.85□□□□□ -0.99
LINC00643-202ENST00000553426 OR5AC2Q9NZP5 309 aa8.85□□□□□ -0.99
LINC00643-202ENST00000553426 ZNF492Q9P255 531 aa8.85□□□□□ -0.99
LINC00643-202ENST00000553426 MRPS16Q9Y3D3 137 aaKnown RBP8.85□□□□□ -0.99
LINC00643-202ENST00000553426 LRP1BQ9NZR2 4599 aa8.85□□□□□ -0.99
LINC00643-202ENST00000553426 IGHV1OR15-1A0A075B7D0 117 aa8.84□□□□□ -0.99
LINC00643-202ENST00000553426 INMT-MINDY4F8WBC2 141 aa8.84□□□□□ -0.99
LINC00643-202ENST00000553426 OR10J4P0C629 311 aa8.84□□□□□ -0.99
LINC00643-202ENST00000553426 BTF3P20290 206 aaKnown RBP8.84□□□□□ -0.99
LINC00643-202ENST00000553426 ZNF138P52744 262 aa8.84□□□□□ -0.99
LINC00643-202ENST00000553426 TCL1AP56279 114 aa8.84□□□□□ -0.99
LINC00643-202ENST00000553426 IBA57Q5T440 356 aaKnown RBP8.84□□□□□ -0.99
LINC00643-202ENST00000553426 C11orf72Q8NBR9 251 aa8.84□□□□□ -0.99
LINC00643-202ENST00000553426 FAM167A-AS1Q96KT0 104 aa8.84□□□□□ -0.99
LINC00643-202ENST00000553426 VGLL1Q99990 258 aa8.84□□□□□ -0.99
LINC00643-202ENST00000553426 TRBV7-9A0A0J9YWB2 115 aa8.83□□□□□ -1
LINC00643-202ENST00000553426 SSNA1O43805 119 aa8.83□□□□□ -1
LINC00643-202ENST00000553426 SPINK4O60575 86 aa8.83□□□□□ -1
LINC00643-202ENST00000553426 IFNA5P01569 189 aa8.83□□□□□ -1
LINC00643-202ENST00000553426 TAS2R45P59539 299 aa8.83□□□□□ -1
LINC00643-202ENST00000553426 RANP62826 216 aaKnown RBP8.83□□□□□ -1
LINC00643-202ENST00000553426 SLAQ13239 276 aa8.83□□□□□ -1
LINC00643-202ENST00000553426 LYPD1Q8N2G4 141 aa8.83□□□□□ -1
LINC00643-202ENST00000553426 SCGB1C1Q8TD33 95 aa8.83□□□□□ -1
LINC00643-202ENST00000553426 PPP1R1CQ8WVI7 109 aa8.83□□□□□ -1
LINC00643-202ENST00000553426 FXYD5Q96DB9 178 aa8.83□□□□□ -1
LINC00643-202ENST00000553426 ST6GAL2Q96JF0 529 aa8.83□□□□□ -1
LINC00643-202ENST00000553426 ATP5SQ99766 215 aa8.83□□□□□ -1
LINC00643-202ENST00000553426 KLF12Q9Y4X4 402 aa8.83□□□□□ -1
LINC00643-202ENST00000553426 PAX4O43316 350 aa8.82□□□□□ -1
LINC00643-202ENST00000553426 DEFA1P59665 94 aa8.82□□□□□ -1
LINC00643-202ENST00000553426 DEFA3P59666 94 aa8.82□□□□□ -1
LINC00643-202ENST00000553426 UBE2L3P68036 154 aaKnown RBP8.82□□□□□ -1
LINC00643-202ENST00000553426 ZNF415Q09FC8 603 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms