RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 RNF114Q9Y508 228 aa14.78□□□□□ -0.04
RBFOX1-215ENST00000553186 IGKV3-7A0A075B6H7 116 aa14.77□□□□□ -0.04
RBFOX1-215ENST00000553186 CA1P00915 261 aaPredicted RBP14.77□□□□□ -0.04
RBFOX1-215ENST00000553186 PROK1P58294 105 aa14.77□□□□□ -0.04
RBFOX1-215ENST00000553186 COX8CQ7Z4L0 72 aa14.77□□□□□ -0.04
RBFOX1-215ENST00000553186 SRSF2Q01130 221 aaKnown RBP14.77□□□□□ -0.05
RBFOX1-215ENST00000553186 Q8TAT8 98 aa14.77□□□□□ -0.05
RBFOX1-215ENST00000553186 DCANP1Q8TF63 244 aa14.77□□□□□ -0.05
RBFOX1-215ENST00000553186 C8orf49Q96NF6 230 aa14.77□□□□□ -0.05
RBFOX1-215ENST00000553186 PRR25Q96S07 402 aa14.77□□□□□ -0.05
RBFOX1-215ENST00000553186 CRIP1P50238 77 aa14.76□□□□□ -0.05
RBFOX1-215ENST00000553186 ERCC8Q13216 396 aa14.76□□□□□ -0.05
RBFOX1-215ENST00000553186 SMIM27A0A1W2PRY6 76 aa14.75□□□□□ -0.05
RBFOX1-215ENST00000553186 GATCO43716 136 aaKnown RBP14.75□□□□□ -0.05
RBFOX1-215ENST00000553186 TYMSP04818 313 aa14.75□□□□□ -0.05
RBFOX1-215ENST00000553186 CTAG1AP78358 180 aa14.75□□□□□ -0.05
RBFOX1-215ENST00000553186 SAPCD1Q5SSQ6 148 aa14.75□□□□□ -0.05
RBFOX1-215ENST00000553186 DLX4Q92988 240 aaPredicted RBP14.75□□□□□ -0.05
RBFOX1-215ENST00000553186 RAX2Q96IS3 184 aa14.75□□□□□ -0.05
RBFOX1-215ENST00000553186 TSSC4Q9Y5U2 329 aaPredicted RBP14.75□□□□□ -0.05
RBFOX1-215ENST00000553186 NPIPB6E9PJ23 425 aa14.75□□□□□ -0.05
RBFOX1-215ENST00000553186 FHL3Q13643 280 aa14.75□□□□□ -0.05
RBFOX1-215ENST00000553186 GBGT1Q8N5D6 347 aa14.75□□□□□ -0.05
RBFOX1-215ENST00000553186 GPR61Q9BZJ8 451 aa14.75□□□□□ -0.05
RBFOX1-215ENST00000553186 AGPAT4-IT1Q9H0P7 198 aa14.75□□□□□ -0.05
RBFOX1-215ENST00000553186 F8P00451 2351 aa14.75□□□□□ -0.05
RBFOX1-215ENST00000553186 A0A1W2PRX2 142 aa14.74□□□□□ -0.05
RBFOX1-215ENST00000553186 OR9G4Q8NGQ1 327 aa14.74□□□□□ -0.05
RBFOX1-215ENST00000553186 SRD5A3Q9H8P0 318 aa14.74□□□□□ -0.05
RBFOX1-215ENST00000553186 TRAV9-1A0A075B6T8 112 aa14.73□□□□□ -0.05
RBFOX1-215ENST00000553186 P01737 135 aa14.73□□□□□ -0.05
RBFOX1-215ENST00000553186 SNRPEP62304 92 aaKnown RBP14.73□□□□□ -0.05
RBFOX1-215ENST00000553186 C9orf47Q6ZRZ4 202 aa14.73□□□□□ -0.05
RBFOX1-215ENST00000553186 ZNF738Q8NE65 137 aa14.73□□□□□ -0.05
RBFOX1-215ENST00000553186 MS4A6AQ9H2W1 248 aa14.73□□□□□ -0.05
RBFOX1-215ENST00000553186 RPP21Q9H633 154 aaKnown RBP14.73□□□□□ -0.05
RBFOX1-215ENST00000553186 DAZAP1Q96EP5 407 aaKnown RBP14.73□□□□□ -0.05
RBFOX1-215ENST00000553186 PEMTQ9UBM1 199 aa14.73□□□□□ -0.05
RBFOX1-215ENST00000553186 TRGC2P03986 189 aa14.72□□□□□ -0.05
RBFOX1-215ENST00000553186 TCL1AP56279 114 aa14.72□□□□□ -0.05
RBFOX1-215ENST00000553186 CT83Q5H943 113 aa14.72□□□□□ -0.05
RBFOX1-215ENST00000553186 TSKUQ8WUA8 353 aa14.72□□□□□ -0.05
RBFOX1-215ENST00000553186 BTF3L4Q96K17 158 aa14.72□□□□□ -0.05
RBFOX1-215ENST00000553186 C2CD3Q4AC94 2353 aa14.72□□□□□ -0.05
RBFOX1-215ENST00000553186 CCL24O00175 119 aa14.71□□□□□ -0.05
RBFOX1-215ENST00000553186 SAMD13Q5VXD3 122 aa14.71□□□□□ -0.05
RBFOX1-215ENST00000553186 PPP1R14DQ9NXH3 145 aa14.71□□□□□ -0.05
RBFOX1-215ENST00000553186 C5orf52A6NGY3 159 aa14.71□□□□□ -0.05
RBFOX1-215ENST00000553186 PHOX2AO14813 284 aa14.71□□□□□ -0.05
RBFOX1-215ENST00000553186 CT45A10P0DMU9 189 aa14.71□□□□□ -0.05
RBFOX1-215ENST00000553186 M0QZ24 198 aa14.7□□□□□ -0.06
RBFOX1-215ENST00000553186 CSN3P07498 182 aa14.7□□□□□ -0.06
RBFOX1-215ENST00000553186 ZNF705DP0CH99 300 aaPredicted RBP14.7□□□□□ -0.06
RBFOX1-215ENST00000553186 ZNF705BP0CI00 300 aaPredicted RBP14.7□□□□□ -0.06
RBFOX1-215ENST00000553186 ZNF138P52744 262 aa14.7□□□□□ -0.06
RBFOX1-215ENST00000553186 DEFB1P60022 68 aa14.7□□□□□ -0.06
RBFOX1-215ENST00000553186 WFDC3Q8IUB2 231 aa14.7□□□□□ -0.06
RBFOX1-215ENST00000553186 ADARB2-AS1A8MUL3 147 aa14.7□□□□□ -0.06
RBFOX1-215ENST00000553186 OVOL1O14753 267 aa14.7□□□□□ -0.06
RBFOX1-215ENST00000553186 ZNF80P51504 273 aaPredicted RBP14.7□□□□□ -0.06
RBFOX1-215ENST00000553186 TMEM78Q5T7P6 136 aa14.7□□□□□ -0.06
RBFOX1-215ENST00000553186 OR4B1Q8NGF8 309 aa14.7□□□□□ -0.06
RBFOX1-215ENST00000553186 NDFIP1Q9BT67 221 aa14.7□□□□□ -0.06
RBFOX1-215ENST00000553186 K7EQG2 157 aa14.69□□□□□ -0.06
RBFOX1-215ENST00000553186 ID1P41134 155 aa14.69□□□□□ -0.06
RBFOX1-215ENST00000553186 NEU1Q99519 415 aa14.69□□□□□ -0.06
RBFOX1-215ENST00000553186 CYSRT1A8MQ03 144 aa14.68□□□□□ -0.06
RBFOX1-215ENST00000553186 KRTAP10-3P60369 221 aa14.68□□□□□ -0.06
RBFOX1-215ENST00000553186 FAM162BQ5T6X4 162 aa14.68□□□□□ -0.06
RBFOX1-215ENST00000553186 GTSF1Q8WW33 167 aa14.68□□□□□ -0.06
RBFOX1-215ENST00000553186 A8MWL6 223 aa14.68□□□□□ -0.06
RBFOX1-215ENST00000553186 UBE2CO00762 179 aa14.68□□□□□ -0.06
RBFOX1-215ENST00000553186 S100A6P06703 90 aa14.68□□□□□ -0.06
RBFOX1-215ENST00000553186 FRMD6-AS1P0C7T7 363 aa14.68□□□□□ -0.06
RBFOX1-215ENST00000553186 TFPI2P48307 235 aa14.68□□□□□ -0.06
RBFOX1-215ENST00000553186 NUP35Q8NFH5 326 aa14.68□□□□□ -0.06
RBFOX1-215ENST00000553186 OR2D3Q8NGH3 330 aa14.68□□□□□ -0.06
RBFOX1-215ENST00000553186 HIGD1CA8MV81 97 aa14.67□□□□□ -0.06
RBFOX1-215ENST00000553186 F6UB75 175 aa14.67□□□□□ -0.06
RBFOX1-215ENST00000553186 SH2D1AO60880 128 aa14.67□□□□□ -0.06
RBFOX1-215ENST00000553186 OR8A1Q8NGG7 326 aa14.67□□□□□ -0.06
RBFOX1-215ENST00000553186 NAT8BQ9UHF3 227 aa14.67□□□□□ -0.06
RBFOX1-215ENST00000553186 IZUMO1RA6ND01 250 aa14.67□□□□□ -0.06
RBFOX1-215ENST00000553186 RPL19P84098 196 aaKnown RBP14.67□□□□□ -0.06
RBFOX1-215ENST00000553186 OR10J6PQ8NGY7 276 aa14.67□□□□□ -0.06
RBFOX1-215ENST00000553186 LINC00477Q96M19 166 aa14.67□□□□□ -0.06
RBFOX1-215ENST00000553186 SPINK4O60575 86 aa14.66□□□□□ -0.06
RBFOX1-215ENST00000553186 GFRA4Q9GZZ7 299 aa14.66□□□□□ -0.06
RBFOX1-215ENST00000553186 FRZBQ92765 325 aa14.66□□□□□ -0.06
RBFOX1-215ENST00000553186 LENEPQ9Y5L5 61 aa14.66□□□□□ -0.06
RBFOX1-215ENST00000553186 NIPBLQ6KC79 2804 aaeCLIP14.65□□□□□ -0.06
RBFOX1-215ENST00000553186 FAM231BA6NCW3 169 aa14.65□□□□□ -0.06
RBFOX1-215ENST00000553186 ZNF688P0C7X2 276 aa14.65□□□□□ -0.06
RBFOX1-215ENST00000553186 GZMBP10144 247 aa14.65□□□□□ -0.06
RBFOX1-215ENST00000553186 ACTL10Q5JWF8 245 aa14.65□□□□□ -0.06
RBFOX1-215ENST00000553186 SNRPD3P62318 126 aaKnown RBP14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 S100A12P80511 92 aa14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 HIST1H1AQ02539 215 aaPredicted RBP14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 TMEM61Q8N0U2 210 aa14.64□□□□□ -0.07
RBFOX1-215ENST00000553186 HIST1H2BKO60814 126 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms