RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 NHLRC2Q8NBF2 726 aa8.52□□□□□ -1.05
CACNB3-224ENST00000552812 DLX4Q92988 240 aaPredicted RBP8.52□□□□□ -1.05
CACNB3-224ENST00000552812 RAX2Q96IS3 184 aa8.52□□□□□ -1.05
CACNB3-224ENST00000552812 F8P00451 2351 aa8.52□□□□□ -1.05
CACNB3-224ENST00000552812 IGKV2-40A0A087WW87 121 aaPredicted RBP8.51□□□□□ -1.05
CACNB3-224ENST00000552812 ZNF705FA8MVS1 300 aaPredicted RBP8.51□□□□□ -1.05
CACNB3-224ENST00000552812 IGKV2D-40P01614 121 aaPredicted RBP8.51□□□□□ -1.05
CACNB3-224ENST00000552812 S100PP25815 95 aa8.51□□□□□ -1.05
CACNB3-224ENST00000552812 SAPCD1Q5SSQ6 148 aa8.51□□□□□ -1.05
CACNB3-224ENST00000552812 IBA57Q5T440 356 aaKnown RBP8.51□□□□□ -1.05
CACNB3-224ENST00000552812 DCANP1Q8TF63 244 aa8.51□□□□□ -1.05
CACNB3-224ENST00000552812 DUX3Q96PT4 197 aa8.51□□□□□ -1.05
CACNB3-224ENST00000552812 A0A1W2PRX2 142 aa8.51□□□□□ -1.05
CACNB3-224ENST00000552812 PFN1P07737 140 aaKnown RBP8.51□□□□□ -1.05
CACNB3-224ENST00000552812 ID1P41134 155 aa8.51□□□□□ -1.05
CACNB3-224ENST00000552812 KCNIP4Q6PIL6 250 aa8.51□□□□□ -1.05
CACNB3-224ENST00000552812 COX8CQ7Z4L0 72 aa8.51□□□□□ -1.05
CACNB3-224ENST00000552812 NDUFA11Q86Y39 141 aa8.51□□□□□ -1.05
CACNB3-224ENST00000552812 ZNF492Q9P255 531 aa8.51□□□□□ -1.05
CACNB3-224ENST00000552812 URGCP-MRPS24S4R325 110 aa8.51□□□□□ -1.05
CACNB3-224ENST00000552812 V9GYV3 84 aa8.51□□□□□ -1.05
CACNB3-224ENST00000552812 TRBV24-1A0A075B6N3 115 aa8.5□□□□□ -1.05
CACNB3-224ENST00000552812 ADAMTSL5Q6ZMM2 481 aa8.5□□□□□ -1.05
CACNB3-224ENST00000552812 ZNF738Q8NE65 137 aa8.5□□□□□ -1.05
CACNB3-224ENST00000552812 RNASE7Q9H1E1 156 aaKnown RBP8.5□□□□□ -1.05
CACNB3-224ENST00000552812 PPP1R14DQ9NXH3 145 aa8.5□□□□□ -1.05
CACNB3-224ENST00000552812 OVOL1O14753 267 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 CSN3P07498 182 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 SRSF2Q01130 221 aaKnown RBP8.49□□□□□ -1.05
CACNB3-224ENST00000552812 PRR27Q6MZM9 219 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 C9orf47Q6ZRZ4 202 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 BTF3L4Q96K17 158 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 C20orf173Q96LM9 149 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 PRR25Q96S07 402 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 VGLL1Q99990 258 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 NDFIP1Q9BT67 221 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 SSBP4Q9BWG4 385 aaPredicted RBP8.49□□□□□ -1.05
CACNB3-224ENST00000552812 MS4A6AQ9H2W1 248 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 SIGLEC8Q9NYZ4 499 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 IL36BQ9NZH7 164 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 IGKV3-7A0A075B6H7 116 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 TRAV9-1A0A075B6T8 112 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 TRAV2A0A0B4J234 112 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 C19orf71A6NCJ1 209 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 CYSRT1A8MQ03 144 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 ZNF705GA8MUZ8 300 aaPredicted RBP8.49□□□□□ -1.05
CACNB3-224ENST00000552812 PRAC2D3DTV9 90 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 K7EQG2 157 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 CT45A10P0DMU9 189 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 RAB5AP20339 215 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 PAFAH1B2P68402 229 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 HIST2H2BDQ6DRA6 164 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 GBGT1Q8N5D6 347 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 NUDT10Q8NFP7 164 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 NUDT11Q96G61 164 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 PYGO2Q9BRQ0 406 aa8.49□□□□□ -1.05
CACNB3-224ENST00000552812 SNRPD3P62318 126 aaKnown RBP8.48□□□□□ -1.05
CACNB3-224ENST00000552812 CT83Q5H943 113 aa8.48□□□□□ -1.05
CACNB3-224ENST00000552812 TMEM78Q5T7P6 136 aa8.48□□□□□ -1.05
CACNB3-224ENST00000552812 DAZAP1Q96EP5 407 aaKnown RBP8.48□□□□□ -1.05
CACNB3-224ENST00000552812 ZC2HC1AQ96GY0 325 aa8.48□□□□□ -1.05
CACNB3-224ENST00000552812 LENEPQ9Y5L5 61 aa8.48□□□□□ -1.05
CACNB3-224ENST00000552812 SETXQ7Z333 2677 aaKnown RBP8.48□□□□□ -1.05
CACNB3-224ENST00000552812 TGIF2-C20orf24A0A0A6YYL0 155 aa8.47□□□□□ -1.05
CACNB3-224ENST00000552812 NPIPB6E9PJ23 425 aa8.47□□□□□ -1.05
CACNB3-224ENST00000552812 GATCO43716 136 aaKnown RBP8.47□□□□□ -1.05
CACNB3-224ENST00000552812 P01737 135 aa8.47□□□□□ -1.05
CACNB3-224ENST00000552812 CXCL1P09341 107 aa8.47□□□□□ -1.05
CACNB3-224ENST00000552812 ZNF138P52744 262 aa8.47□□□□□ -1.05
CACNB3-224ENST00000552812 KRTAP10-3P60369 221 aa8.47□□□□□ -1.05
CACNB3-224ENST00000552812 LINC00322Q6ZN03 302 aaPredicted RBP8.47□□□□□ -1.05
CACNB3-224ENST00000552812 OR4B1Q8NGF8 309 aa8.47□□□□□ -1.05
CACNB3-224ENST00000552812 OR10J6PQ8NGY7 276 aa8.47□□□□□ -1.05
CACNB3-224ENST00000552812 Q8TAT8 98 aa8.47□□□□□ -1.05
CACNB3-224ENST00000552812 DYNLRB2Q8TF09 96 aa8.47□□□□□ -1.05
CACNB3-224ENST00000552812 FAM210BQ96KR6 192 aa8.47□□□□□ -1.05
CACNB3-224ENST00000552812 LINC00477Q96M19 166 aa8.47□□□□□ -1.05
CACNB3-224ENST00000552812 AGPAT4-IT1Q9H0P7 198 aa8.47□□□□□ -1.05
CACNB3-224ENST00000552812 C2CD3Q4AC94 2353 aa8.46□□□□□ -1.05
CACNB3-224ENST00000552812 A0A1W2PPQ1 181 aa8.46□□□□□ -1.05
CACNB3-224ENST00000552812 SMIM27A0A1W2PRY6 76 aa8.46□□□□□ -1.05
CACNB3-224ENST00000552812 PRB4P10163 310 aaPredicted RBP8.46□□□□□ -1.05
CACNB3-224ENST00000552812 ERCC8Q13216 396 aa8.46□□□□□ -1.05
CACNB3-224ENST00000552812 RBPMS2Q6ZRY4 209 aaKnown RBP8.46□□□□□ -1.05
CACNB3-224ENST00000552812 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.46□□□□□ -1.05
CACNB3-224ENST00000552812 C8orf49Q96NF6 230 aa8.46□□□□□ -1.05
CACNB3-224ENST00000552812 RPP21Q9H633 154 aaKnown RBP8.46□□□□□ -1.05
CACNB3-224ENST00000552812 SELENOKQ9Y6D0 94 aa8.46□□□□□ -1.05
CACNB3-224ENST00000552812 TRAV25A0A0B4J276 109 aa8.46□□□□□ -1.06
CACNB3-224ENST00000552812 TRBV7-9A0A0J9YWB2 115 aa8.46□□□□□ -1.06
CACNB3-224ENST00000552812 FAM3BP58499 235 aaPredicted RBP8.46□□□□□ -1.06
CACNB3-224ENST00000552812 DEFB114Q30KQ6 69 aa8.46□□□□□ -1.06
CACNB3-224ENST00000552812 NSUN5P1Q3KNT7 163 aa8.46□□□□□ -1.06
CACNB3-224ENST00000552812 SMUG1Q53HV7 270 aa8.46□□□□□ -1.06
CACNB3-224ENST00000552812 WFDC3Q8IUB2 231 aa8.46□□□□□ -1.06
CACNB3-224ENST00000552812 OR8A1Q8NGG7 326 aa8.46□□□□□ -1.06
CACNB3-224ENST00000552812 TSKUQ8WUA8 353 aa8.46□□□□□ -1.06
CACNB3-224ENST00000552812 GPR61Q9BZJ8 451 aa8.46□□□□□ -1.06
CACNB3-224ENST00000552812 TMA7Q9Y2S6 64 aaKnown RBP8.46□□□□□ -1.06
CACNB3-224ENST00000552812 FAM231BA6NCW3 169 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms