RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 ANK1P16157 1881 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 TRPM7Q96QT4 1865 aa0.48□□□□□ -2.33
USP44-207ENST00000552237 CD109Q6YHK3 1445 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 RTL9Q8NET4 1388 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 E9PCH4 1651 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 BORCS7-ASMTA0A0B4J1R7 106 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 TRAV13-1A0A0B4J241 112 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 ODAMA1E959 279 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 SMIM24O75264 130 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 RBP4P02753 201 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 HIST1H1BP16401 226 aaKnown RBP0.47□□□□□ -2.33
USP44-207ENST00000552237 RPS3P23396 243 aaKnown RBP eCLIP0.47□□□□□ -2.33
USP44-207ENST00000552237 CKS2P33552 79 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 GLRXP35754 106 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 ROMO1P60602 79 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 MAXP61244 160 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 IDO2Q6ZQW0 420 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 LINC00305Q7Z4B0 112 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 EXOC3-AS1Q8N2X6 119 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 C10orf111Q8N326 155 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 SMIM20Q8N5G0 67 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 TMEM229BQ8NBD8 167 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 ATG5Q9H1Y0 275 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 CECR2Q9BXF3 1484 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 TRAPPC8Q9Y2L5 1435 aa0.47□□□□□ -2.33
USP44-207ENST00000552237 MYH9P35579 1960 aaKnown RBP0.46□□□□□ -2.34
USP44-207ENST00000552237 LOC107984156A0A0G2JMH3 177 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 TRDV1A0A1B0GX56 115 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 A0A1W2PPB8 328 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 A0A1W2PRS3 328 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 TMEM189A5PLL7 270 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 ZNF727A8MUV8 499 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 KIR3DP1A8MWS1 328 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 MCRIP1C9JLW8 97 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 GABARAPH6UMI1 98 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 K7ERJ3 54 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 EDF1O60869 148 aaKnown RBP0.46□□□□□ -2.34
USP44-207ENST00000552237 GYPBP06028 91 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 DBIP07108 87 aaKnown RBP0.46□□□□□ -2.34
USP44-207ENST00000552237 G0S2P27469 103 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 S100A11P31949 105 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 GTF2A1P52655 376 aaPredicted RBP0.46□□□□□ -2.34
USP44-207ENST00000552237 CAV3P56539 151 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 QRFPP83859 136 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 SPINK13Q1W4C9 94 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 OCIAD2Q56VL3 154 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 SPINK9Q5DT21 86 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 C1orf134Q5TEV5 83 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 PPP1R2P3Q6NXS1 205 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 TOMM20LQ6UXN7 152 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 PHF5AQ7RTV0 110 aaKnown RBP0.46□□□□□ -2.34
USP44-207ENST00000552237 LYG2Q86SG7 212 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 Q86TA4 180 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 PRR15Q8IV56 129 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 ARL17AQ8IVW1 177 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 Q8IYB0 196 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 TCTEX1D1Q8N7M0 179 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 BRK1Q8WUW1 75 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 ANP32BQ92688 251 aaKnown RBP0.46□□□□□ -2.34
USP44-207ENST00000552237 C19orf12Q9NSK7 152 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 COA4Q9NYJ1 87 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 CHCHD2Q9Y6H1 151 aaPredicted RBP0.46□□□□□ -2.34
USP44-207ENST00000552237 DLC1Q96QB1 1528 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 A2MP01023 1474 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 CACNA1EQ15878 2313 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 TRPM1Q7Z4N2 1603 aa0.46□□□□□ -2.34
USP44-207ENST00000552237 KIAA1549LQ6ZVL6 1849 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 CITO14578 2027 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 NISCHQ9Y2I1 1504 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 NAV3Q8IVL0 2385 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 TMEM30CPA0ZSE6 113 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 C9orf170A2RU37 121 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 NUPR2A6NF83 97 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 TMEM238C9JI98 176 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 H3BMG7 143 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 J3QR89 54 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 DPM2O94777 84 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 IGHV3-33P01772 117 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 FABP1P07148 127 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 CYBAP13498 195 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 SPINT3P49223 89 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 GNG10P50151 68 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 INSL3P51460 131 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 POLR2JP52435 117 aaKnown RBP0.45□□□□□ -2.34
USP44-207ENST00000552237 EFNA4P52798 201 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 PCBD1P61457 104 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 MIR22HGQ0VDD5 57 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 CCDC153Q494R4 210 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 TMEM128Q5BJH2 165 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 SPATA8Q6RVD6 105 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 KRTAP19-3Q7Z4W3 81 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 OR8I2Q8N0Y5 310 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 RMND5BQ96G75 393 aaPredicted RBP0.45□□□□□ -2.34
USP44-207ENST00000552237 HOPXQ9BPY8 73 aaPredicted RBP0.45□□□□□ -2.34
USP44-207ENST00000552237 LPAR5Q9H1C0 372 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 COL4A5P29400 1685 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 FER1L6Q2WGJ9 1857 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 TECPR2O15040 1411 aa0.45□□□□□ -2.34
USP44-207ENST00000552237 AFDNP55196 1824 aaKnown RBP0.45□□□□□ -2.34
USP44-207ENST00000552237 PTPRZ1P23471 2315 aaPredicted RBP0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms