RNA–Protein interactions for RNA: ENST00000552008.5

LIMA1-209, Transcript of LIM domain and actin binding 1, humanhuman

TSL 5

Gene LIMA1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-209ENST00000552008 HELZP42694 1942 aaKnown RBP1.07□□□□□ -2.24
LIMA1-209ENST00000552008 DOCK6Q96HP0 2047 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 TRBV6-7A0A0A0MS04 114 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 TRBV7-1A0A0A6YYK4 115 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 IGKV1D-43A0A0B4J1Z2 117 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 A0A1B0GU33 70 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 TMEM235A6NFC5 223 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 SDHAF1A6NFY7 115 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 A8MWP6 167 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 UMAD1C9J7I0 102 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 G3V3Q6 166 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 TSTD3H0UI37 97 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 H0Y980 276 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 TMEM250H0YL14 139 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 SMLR1H3BR10 107 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 BUB1B-PAK6H3BSN5 160 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 NPFFO15130 113 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 PGLYRP1O75594 196 aaPredicted RBP1.07□□□□□ -2.24
LIMA1-209ENST00000552008 IGHV1-69P01742 117 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 PRH1P02810 166 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 OR4E1P0C645 316 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 CGB3P0DN86 165 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 CGB7P0DN87 165 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 SLC25A4P12235 298 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 TPT1P13693 172 aaKnown RBP1.07□□□□□ -2.24
LIMA1-209ENST00000552008 LGALS3P17931 250 aaKnown RBP1.07□□□□□ -2.24
LIMA1-209ENST00000552008 PSMB6P28072 239 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 CSN1S1P47710 185 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 DYNLT3P51808 116 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 DLX6P56179 175 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 CLDN12P56749 244 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 PIGPP57054 158 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 S100A10P60903 97 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 SPCS3P61009 180 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 ARF6P62330 175 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 DEFA6Q01524 100 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 TNFRSF9Q07011 255 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 OR2F1Q13607 317 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 LTC4SQ16873 150 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 IAH1Q2TAA2 248 aaPredicted RBP1.07□□□□□ -2.24
LIMA1-209ENST00000552008 LRRC75BQ2VPJ9 315 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 HLA-DRB5Q30154 266 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 PIGYQ3MUY2 71 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 MORN2Q502X0 79 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 AKIRIN2Q53H80 203 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 AKR1C8PQ5T2L2 129 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 LYG2Q86SG7 212 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 SLC51BQ86UW2 128 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 LYPD6Q86Y78 171 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 SELENOHQ8IZQ5 122 aaKnown RBP1.07□□□□□ -2.24
LIMA1-209ENST00000552008 OR11H6Q8NGC7 330 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 OR5C1Q8NGR4 320 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 OR1L8Q8NGR8 309 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 OR10K1Q8NGX5 313 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 RNASEH2CQ8TDP1 164 aaKnown RBP1.07□□□□□ -2.24
LIMA1-209ENST00000552008 C10orf105Q8TEF2 133 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 LSM10Q969L4 123 aaKnown RBP1.07□□□□□ -2.24
LIMA1-209ENST00000552008 USMG5Q96IX5 58 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 C2orf50Q96LR7 162 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 AMELYQ99218 206 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 TMEM208Q9BTX3 173 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 GGACTQ9BVM4 153 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 NMES1Q9C002 83 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 NKX6-2Q9C056 277 aaPredicted RBP1.07□□□□□ -2.24
LIMA1-209ENST00000552008 LPAR5Q9H1C0 372 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 SH3BGRL3Q9H299 93 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 NAA60Q9H7X0 242 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 NPVFQ9HCQ7 196 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 BIN3Q9NQY0 253 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 SPANXCQ9NY87 97 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 COA4Q9NYJ1 87 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 PSENENQ9NZ42 101 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 VPREB3Q9UKI3 123 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 ZFHX2Q9C0A1 2572 aaPredicted RBP1.07□□□□□ -2.24
LIMA1-209ENST00000552008 PLXNA2O75051 1894 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 CENPFP49454 3210 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 GREB1Q4ZG55 1949 aa1.07□□□□□ -2.24
LIMA1-209ENST00000552008 COL4A2P08572 1712 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 TRPM6Q9BX84 2022 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 IGKV1D-37A0A075B6S9 117 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 IGHV3OR15-7A0A075B7D8 119 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 IGKV1-9A0A0C4DH69 117 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 C9orf170A2RU37 121 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 MEIS3P1A6NDR6 274 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 CRYM-AS1A6NIL9 109 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 FAM223BA6NKX1 122 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 C17orf51A8MQB3 221 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 HMSDA8MTL9 139 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 C17orf98A8MV24 154 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 DEFB108AA8MXU0 73 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 C1orf196B1AJZ1 125 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 C8orf87E5RJ46 101 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 H3BUA1 57 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 J3QRK9 145 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 LECT2O14960 151 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 PIN1P1O15428 100 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 ZNF73O43830 326 aaPredicted RBP1.06□□□□□ -2.24
LIMA1-209ENST00000552008 GNG7O60262 68 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 S1PR2O95136 353 aa1.06□□□□□ -2.24
LIMA1-209ENST00000552008 SFT2D2O95562 160 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms