RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 PMS2P11Q13670 270 aa9.49□□□□□ -0.89
RAB5C-206ENST00000550406 GOLT1AQ6ZVE7 132 aa9.49□□□□□ -0.89
RAB5C-206ENST00000550406 PCNPQ8WW12 178 aaKnown RBP9.49□□□□□ -0.89
RAB5C-206ENST00000550406 RNF183Q96D59 192 aa9.49□□□□□ -0.89
RAB5C-206ENST00000550406 LINC00477Q96M19 166 aa9.49□□□□□ -0.89
RAB5C-206ENST00000550406 ZNF492Q9P255 531 aa9.49□□□□□ -0.89
RAB5C-206ENST00000550406 ARL2-SNX15V9GYD0 113 aa9.49□□□□□ -0.89
RAB5C-206ENST00000550406 TRAV12-2A0A075B6T6 113 aa9.48□□□□□ -0.89
RAB5C-206ENST00000550406 TRAV8-1A0A0A6YYK1 113 aa9.48□□□□□ -0.89
RAB5C-206ENST00000550406 SPRY2O43597 315 aa9.48□□□□□ -0.89
RAB5C-206ENST00000550406 IGLV2-11P01706 119 aa9.48□□□□□ -0.89
RAB5C-206ENST00000550406 NHLRC4P0CG21 123 aaPredicted RBP9.48□□□□□ -0.89
RAB5C-206ENST00000550406 RBMY1A1P0DJD3 496 aaKnown RBP9.48□□□□□ -0.89
RAB5C-206ENST00000550406 RBMY1CP0DJD4 496 aa9.48□□□□□ -0.89
RAB5C-206ENST00000550406 RBMY1FQ15415 496 aaKnown RBP9.48□□□□□ -0.89
RAB5C-206ENST00000550406 CST9LP1Q5W188 147 aa9.48□□□□□ -0.89
RAB5C-206ENST00000550406 C1orf158Q8N1D5 194 aa9.48□□□□□ -0.89
RAB5C-206ENST00000550406 Q8TAT8 98 aa9.48□□□□□ -0.89
RAB5C-206ENST00000550406 CMTM2Q8TAZ6 248 aa9.48□□□□□ -0.89
RAB5C-206ENST00000550406 TVP23CQ96ET8 276 aa9.48□□□□□ -0.89
RAB5C-206ENST00000550406 SGK494Q96LW2 274 aa9.48□□□□□ -0.89
RAB5C-206ENST00000550406 LINC00479Q96M42 142 aa9.48□□□□□ -0.89
RAB5C-206ENST00000550406 ODF3Q96PU9 254 aa9.48□□□□□ -0.89
RAB5C-206ENST00000550406 SPATA25Q9BR10 227 aa9.48□□□□□ -0.89
RAB5C-206ENST00000550406 NKX6-2Q9C056 277 aaPredicted RBP9.48□□□□□ -0.89
RAB5C-206ENST00000550406 PPP1R14DQ9NXH3 145 aa9.48□□□□□ -0.89
RAB5C-206ENST00000550406 GNG13Q9P2W3 67 aa9.48□□□□□ -0.89
RAB5C-206ENST00000550406 TENM3Q9P273 2699 aa9.48□□□□□ -0.89
RAB5C-206ENST00000550406 NBEAL2Q6ZNJ1 2754 aa9.47□□□□□ -0.89
RAB5C-206ENST00000550406 PPT1P50897 306 aa9.47□□□□□ -0.89
RAB5C-206ENST00000550406 NUTF2P61970 127 aaKnown RBP9.47□□□□□ -0.89
RAB5C-206ENST00000550406 PRR9Q5T870 116 aa9.47□□□□□ -0.89
RAB5C-206ENST00000550406 RCHY1Q96PM5 261 aa9.47□□□□□ -0.89
RAB5C-206ENST00000550406 TP53TG1Q9Y2A0 90 aa9.47□□□□□ -0.89
RAB5C-206ENST00000550406 TRAV34A0A0B4J273 112 aa9.46□□□□□ -0.9
RAB5C-206ENST00000550406 TEX46H3BTG2 121 aa9.46□□□□□ -0.9
RAB5C-206ENST00000550406 PEX7O00628 323 aa9.46□□□□□ -0.9
RAB5C-206ENST00000550406 IFNA7P01567 189 aa9.46□□□□□ -0.9
RAB5C-206ENST00000550406 CRISP2P16562 243 aa9.46□□□□□ -0.9
RAB5C-206ENST00000550406 ZNF138P52744 262 aa9.46□□□□□ -0.9
RAB5C-206ENST00000550406 TMEM78Q5T7P6 136 aa9.46□□□□□ -0.9
RAB5C-206ENST00000550406 Q6ZQT7 251 aa9.46□□□□□ -0.9
RAB5C-206ENST00000550406 ZFAND2AQ8N6M9 145 aa9.46□□□□□ -0.9
RAB5C-206ENST00000550406 CYB561D1Q8N8Q1 229 aa9.46□□□□□ -0.9
RAB5C-206ENST00000550406 IGF2BP2-AS1Q96M15 143 aa9.46□□□□□ -0.9
RAB5C-206ENST00000550406 ATG101Q9BSB4 218 aa9.46□□□□□ -0.9
RAB5C-206ENST00000550406 C1QTNF4Q9BXJ3 329 aa9.46□□□□□ -0.9
RAB5C-206ENST00000550406 ZMAT4Q9H898 229 aa9.46□□□□□ -0.9
RAB5C-206ENST00000550406 MANBALQ9NQG1 85 aa9.46□□□□□ -0.9
RAB5C-206ENST00000550406 X6R8D5 127 aa9.46□□□□□ -0.9
RAB5C-206ENST00000550406 KLLNB2CW77 178 aa9.45□□□□□ -0.9
RAB5C-206ENST00000550406 J3KRW8 73 aa9.45□□□□□ -0.9
RAB5C-206ENST00000550406 PRM2P04554 102 aa9.45□□□□□ -0.9
RAB5C-206ENST00000550406 NMBP08949 121 aa9.45□□□□□ -0.9
RAB5C-206ENST00000550406 CDKN1BP46527 198 aa9.45□□□□□ -0.9
RAB5C-206ENST00000550406 GFI1BQ5VTD9 330 aa9.45□□□□□ -0.9
RAB5C-206ENST00000550406 ZNF705AQ6ZN79 300 aaPredicted RBP9.45□□□□□ -0.9
RAB5C-206ENST00000550406 HIST1H2BAQ96A08 127 aa9.45□□□□□ -0.9
RAB5C-206ENST00000550406 RARRES2Q99969 163 aa9.45□□□□□ -0.9
RAB5C-206ENST00000550406 PSG8Q9UQ74 426 aa9.45□□□□□ -0.9
RAB5C-206ENST00000550406 TRBV7-9A0A0J9YWB2 115 aa9.44□□□□□ -0.9
RAB5C-206ENST00000550406 LOC102723971A0A1B0GUV8 181 aa9.44□□□□□ -0.9
RAB5C-206ENST00000550406 SERTM2A0A1B0GWG4 89 aa9.44□□□□□ -0.9
RAB5C-206ENST00000550406 SCO2A0A1W2PP80 73 aa9.44□□□□□ -0.9
RAB5C-206ENST00000550406 C11orf94C9JXX5 98 aa9.44□□□□□ -0.9
RAB5C-206ENST00000550406 AMBPP02760 352 aa9.44□□□□□ -0.9
RAB5C-206ENST00000550406 LEPP41159 167 aa9.44□□□□□ -0.9
RAB5C-206ENST00000550406 TMEM75Q8N9X5 138 aa9.44□□□□□ -0.9
RAB5C-206ENST00000550406 OR11H2Q8NH07 326 aa9.44□□□□□ -0.9
RAB5C-206ENST00000550406 C2CD4CQ8TF44 421 aa9.44□□□□□ -0.9
RAB5C-206ENST00000550406 KLF12Q9Y4X4 402 aa9.44□□□□□ -0.9
RAB5C-206ENST00000550406 ZNF324O75467 553 aaPredicted RBP9.43□□□□□ -0.9
RAB5C-206ENST00000550406 BCL2P10415 239 aa9.43□□□□□ -0.9
RAB5C-206ENST00000550406 TSPOP30536 169 aa9.43□□□□□ -0.9
RAB5C-206ENST00000550406 FLI1Q01543 452 aaPredicted RBP9.43□□□□□ -0.9
RAB5C-206ENST00000550406 BTN1A1Q13410 526 aa9.43□□□□□ -0.9
RAB5C-206ENST00000550406 C8orf49Q96NF6 230 aa9.43□□□□□ -0.9
RAB5C-206ENST00000550406 TCEAL7Q9BRU2 100 aa9.43□□□□□ -0.9
RAB5C-206ENST00000550406 LENEPQ9Y5L5 61 aa9.43□□□□□ -0.9
RAB5C-206ENST00000550406 U3KQK5 164 aa9.43□□□□□ -0.9
RAB5C-206ENST00000550406 TRAV12-3A0A0B4J271 114 aa9.42□□□□□ -0.9
RAB5C-206ENST00000550406 RBFOX3A6NFN3 312 aa9.42□□□□□ -0.9
RAB5C-206ENST00000550406 INSP01308 110 aa9.42□□□□□ -0.9
RAB5C-206ENST00000550406 GPX1P07203 203 aa9.42□□□□□ -0.9
RAB5C-206ENST00000550406 RNASE4P34096 147 aaKnown RBP9.42□□□□□ -0.9
RAB5C-206ENST00000550406 MEF2BQ02080 365 aaPredicted RBP9.42□□□□□ -0.9
RAB5C-206ENST00000550406 PRNTQ86SH4 94 aa9.42□□□□□ -0.9
RAB5C-206ENST00000550406 C11orf52Q96A22 123 aa9.42□□□□□ -0.9
RAB5C-206ENST00000550406 TXNDC17Q9BRA2 123 aa9.42□□□□□ -0.9
RAB5C-206ENST00000550406 VAX2Q9UIW0 290 aa9.42□□□□□ -0.9
RAB5C-206ENST00000550406 IGHV3OR16-12A0A075B7B8 117 aa9.41□□□□□ -0.9
RAB5C-206ENST00000550406 TRBV6-1A0A0K0K1D8 114 aa9.41□□□□□ -0.9
RAB5C-206ENST00000550406 C7orf71A4D174 169 aa9.41□□□□□ -0.9
RAB5C-206ENST00000550406 K7EQM0 130 aa9.41□□□□□ -0.9
RAB5C-206ENST00000550406 IFNA1P01562 189 aa9.41□□□□□ -0.9
RAB5C-206ENST00000550406 TMEM183BQ1AE95 376 aa9.41□□□□□ -0.9
RAB5C-206ENST00000550406 ZNF506Q5JVG8 444 aa9.41□□□□□ -0.9
RAB5C-206ENST00000550406 Q8NAQ8 132 aa9.41□□□□□ -0.9
RAB5C-206ENST00000550406 NEU1Q99519 415 aa9.41□□□□□ -0.9
RAB5C-206ENST00000550406 TREM1Q9NP99 234 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms