RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 DLEU1O43261 78 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 MRPS14O60783 128 aaKnown RBP1.16□□□□□ -2.22
CCDC38-208ENST00000549876 TRACP01848 142 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 MT-ND4LP03901 98 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 IGLC6P0CF74 106 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 RNASE3P12724 160 aaKnown RBP1.16□□□□□ -2.22
CCDC38-208ENST00000549876 CCL4P13236 92 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 AKR1D1P51857 326 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 FOXA3P55318 350 aaPredicted RBP1.16□□□□□ -2.22
CCDC38-208ENST00000549876 COPZ1P61923 177 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 CIRBPQ14011 172 aaKnown RBP1.16□□□□□ -2.22
CCDC38-208ENST00000549876 C1orf134Q5TEV5 83 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 GLIPR1L1Q6UWM5 242 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 C2orf82Q6UX34 121 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 TMEM91Q6ZNR0 172 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 ZNF431Q8TF32 576 aaPredicted RBP1.16□□□□□ -2.22
CCDC38-208ENST00000549876 ARL11Q969Q4 196 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 OR4C12Q96R67 309 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 TP53RKQ96S44 253 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 C2orf88Q9BSF0 95 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 BANF2Q9H503 90 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 TAF9BQ9HBM6 251 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 CHCHD2Q9Y6H1 151 aaPredicted RBP1.16□□□□□ -2.22
CCDC38-208ENST00000549876 SPEF2Q9C093 1822 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 RFX7Q2KHR2 1363 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 RTTNQ86VV8 2226 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 BRWD1Q9NSI6 2320 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 FAM135AQ9P2D6 1515 aa1.15□□□□□ -2.22
CCDC38-208ENST00000549876 SCN3AQ9NY46 2000 aa1.15□□□□□ -2.22
CCDC38-208ENST00000549876 BAHCC1Q9P281 2608 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 CCDC160A6NGH7 325 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 HYPMO75409 117 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 TCRAP04437 139 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 SLC25A5P05141 298 aaKnown RBP1.15□□□□□ -2.23
CCDC38-208ENST00000549876 KDELR1P24390 212 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 ETV6P41212 452 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 RRAS2P62070 204 aaPredicted RBP1.15□□□□□ -2.23
CCDC38-208ENST00000549876 EMX2Q04743 252 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 ARPINQ7Z6K5 226 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 TEN1Q86WV5 123 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 ATOH7Q8N100 152 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 Q8N2B8 174 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 OR5AK2Q8NH90 309 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 ZNF625Q96I27 306 aaPredicted RBP1.15□□□□□ -2.23
CCDC38-208ENST00000549876 LINC00470Q9BZP3 86 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 TMEM191AQ9H0A3 160 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 LPAR5Q9H1C0 372 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 SAR1AQ9NR31 198 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 MED9Q9NWA0 146 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 CCDC167Q9P0B6 97 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 TMEM2Q9UHN6 1383 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 EIF4G3O43432 1585 aaKnown RBP1.15□□□□□ -2.23
CCDC38-208ENST00000549876 POLEQ07864 2286 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 MYH1P12882 1939 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 NALCNQ8IZF0 1738 aa1.15□□□□□ -2.23
CCDC38-208ENST00000549876 GBF1Q92538 1859 aa1.14□□□□□ -2.23
CCDC38-208ENST00000549876 TRAV10A0A0B4J240 114 aa1.14□□□□□ -2.23
CCDC38-208ENST00000549876 NPFFO15130 113 aa1.14□□□□□ -2.23
CCDC38-208ENST00000549876 ERC2-IT1O76042 136 aa1.14□□□□□ -2.23
CCDC38-208ENST00000549876 RBP4P02753 201 aa1.14□□□□□ -2.23
CCDC38-208ENST00000549876 CNBPP62633 177 aaKnown RBP1.14□□□□□ -2.23
CCDC38-208ENST00000549876 BLCAPP62952 87 aa1.14□□□□□ -2.23
CCDC38-208ENST00000549876 CCSMST1Q4G0I0 132 aa1.14□□□□□ -2.23
CCDC38-208ENST00000549876 KRTAP26-1Q6PEX3 210 aa1.14□□□□□ -2.23
CCDC38-208ENST00000549876 ZNF833PQ6ZTB9 187 aa1.14□□□□□ -2.23
CCDC38-208ENST00000549876 CLECL1Q8IZS7 167 aa1.14□□□□□ -2.23
CCDC38-208ENST00000549876 RAB37Q96AX2 223 aa1.14□□□□□ -2.23
CCDC38-208ENST00000549876 NAA38Q9BRA0 125 aaKnown RBP1.14□□□□□ -2.23
CCDC38-208ENST00000549876 CYSTM1Q9H1C7 97 aa1.14□□□□□ -2.23
CCDC38-208ENST00000549876 SLC35B3Q9H1N7 401 aa1.14□□□□□ -2.23
CCDC38-208ENST00000549876 METTL1Q9UBP6 276 aaKnown RBP1.14□□□□□ -2.23
CCDC38-208ENST00000549876 MYH7P12883 1935 aa1.14□□□□□ -2.23
CCDC38-208ENST00000549876 NAIPQ13075 1403 aa1.14□□□□□ -2.23
CCDC38-208ENST00000549876 MYH9P35579 1960 aaKnown RBP1.14□□□□□ -2.23
CCDC38-208ENST00000549876 LAMB2P55268 1798 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 MICAL3Q7RTP6 2002 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 MYH13Q9UKX3 1938 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 COL1A1P02452 1464 aaPredicted RBP1.13□□□□□ -2.23
CCDC38-208ENST00000549876 GRIN2AQ12879 1464 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 ZNF518AQ6AHZ1 1483 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 BCL9LQ86UU0 1499 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 RP1P56715 2156 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 HEATR5BQ9P2D3 2071 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 A0A1B0GV90 55 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 FAM25AB3EWG3 89 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 FAM25CB3EWG5 89 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 FAM25GB3EWG6 89 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 CDC42EP2O14613 210 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 IFNGP01579 166 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 LINC00694P0DN24 101 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 CXCL8P10145 99 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 SLC25A4P12235 298 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 GUCA1AP43080 201 aaPredicted RBP1.13□□□□□ -2.23
CCDC38-208ENST00000549876 PCBD1P61457 104 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 PLGLB1Q02325 96 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 DIAPH2-AS1Q14236 149 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 SCIMPQ6UWF3 145 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.13□□□□□ -2.23
CCDC38-208ENST00000549876 OR5AS1Q8N127 324 aa1.13□□□□□ -2.23
CCDC38-208ENST00000549876 ZNF563Q8TA94 476 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms