RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 TRAV40A0A0B4J280 105 aa8.4□□□□□ -1.06
NPAS3-205ENST00000547068 M0R3E3 92 aa8.4□□□□□ -1.06
NPAS3-205ENST00000547068 ATP5LO75964 103 aa8.4□□□□□ -1.06
NPAS3-205ENST00000547068 TSPAN13O95857 204 aa8.4□□□□□ -1.06
NPAS3-205ENST00000547068 MT-ATP8P03928 68 aa8.4□□□□□ -1.06
NPAS3-205ENST00000547068 THBDP07204 575 aa8.4□□□□□ -1.06
NPAS3-205ENST00000547068 CCL3L1P16619 93 aa8.4□□□□□ -1.06
NPAS3-205ENST00000547068 LYPD1Q8N2G4 141 aa8.4□□□□□ -1.06
NPAS3-205ENST00000547068 FAM169BQ8N8A8 192 aa8.4□□□□□ -1.06
NPAS3-205ENST00000547068 TMEM190Q8WZ59 177 aa8.4□□□□□ -1.06
NPAS3-205ENST00000547068 RASL11BQ9BPW5 248 aa8.4□□□□□ -1.06
NPAS3-205ENST00000547068 ENSAO43768 121 aaKnown RBP8.4□□□□□ -1.07
NPAS3-205ENST00000547068 RBP4P02753 201 aa8.4□□□□□ -1.07
NPAS3-205ENST00000547068 RPL27AP46776 148 aaKnown RBP8.4□□□□□ -1.07
NPAS3-205ENST00000547068 C5orf64Q2M2E5 130 aa8.4□□□□□ -1.07
NPAS3-205ENST00000547068 NXT2Q9NPJ8 142 aaKnown RBP8.4□□□□□ -1.07
NPAS3-205ENST00000547068 PKD1L2Q7Z442 2459 aa8.39□□□□□ -1.07
NPAS3-205ENST00000547068 BOD1L1Q8NFC6 3051 aa8.39□□□□□ -1.07
NPAS3-205ENST00000547068 GATA4P43694 442 aa8.39□□□□□ -1.07
NPAS3-205ENST00000547068 MRGPRG-AS1Q2M3A8 158 aa8.39□□□□□ -1.07
NPAS3-205ENST00000547068 LINC01559Q495D7 138 aa8.39□□□□□ -1.07
NPAS3-205ENST00000547068 GFRALQ6UXV0 394 aa8.39□□□□□ -1.07
NPAS3-205ENST00000547068 ATP6V0E2Q8NHE4 81 aa8.39□□□□□ -1.07
NPAS3-205ENST00000547068 TMEM158Q8WZ71 300 aa8.39□□□□□ -1.07
NPAS3-205ENST00000547068 ATMQ13315 3056 aa8.39□□□□□ -1.07
NPAS3-205ENST00000547068 CACNA1BQ00975 2339 aa8.39□□□□□ -1.07
NPAS3-205ENST00000547068 LINC01546A6NGU7 62 aa8.39□□□□□ -1.07
NPAS3-205ENST00000547068 OR11H12B2RN74 326 aa8.39□□□□□ -1.07
NPAS3-205ENST00000547068 TNFAIP6P98066 277 aaPredicted RBP8.39□□□□□ -1.07
NPAS3-205ENST00000547068 OR11H1Q8NG94 326 aa8.39□□□□□ -1.07
NPAS3-205ENST00000547068 OR11H2Q8NH07 326 aa8.39□□□□□ -1.07
NPAS3-205ENST00000547068 SHANK2-AS3Q9BTD1 123 aa8.39□□□□□ -1.07
NPAS3-205ENST00000547068 GAS8-AS1O95177 125 aa8.38□□□□□ -1.07
NPAS3-205ENST00000547068 CFAP126Q5VTH2 177 aa8.38□□□□□ -1.07
NPAS3-205ENST00000547068 LCNL1Q6ZST4 164 aa8.38□□□□□ -1.07
NPAS3-205ENST00000547068 Q6ZUT4 128 aa8.38□□□□□ -1.07
NPAS3-205ENST00000547068 C9orf106Q8NAJ2 232 aa8.38□□□□□ -1.07
NPAS3-205ENST00000547068 RNF183Q96D59 192 aa8.38□□□□□ -1.07
NPAS3-205ENST00000547068 MRPL35Q9NZE8 188 aaKnown RBP8.38□□□□□ -1.07
NPAS3-205ENST00000547068 ERG28Q9UKR5 140 aa8.38□□□□□ -1.07
NPAS3-205ENST00000547068 IGHV3-72A0A0B4J1Y9 119 aa8.38□□□□□ -1.07
NPAS3-205ENST00000547068 NCBP2LA6PVI3 153 aaKnown RBP8.38□□□□□ -1.07
NPAS3-205ENST00000547068 M0R1B8 84 aa8.38□□□□□ -1.07
NPAS3-205ENST00000547068 TNFRSF6BO95407 300 aa8.38□□□□□ -1.07
NPAS3-205ENST00000547068 XGP55808 180 aa8.38□□□□□ -1.07
NPAS3-205ENST00000547068 NFE4Q86UQ8 179 aa8.38□□□□□ -1.07
NPAS3-205ENST00000547068 RNF185Q96GF1 192 aa8.38□□□□□ -1.07
NPAS3-205ENST00000547068 HOXA3O43365 443 aaPredicted RBP8.37□□□□□ -1.07
NPAS3-205ENST00000547068 EGR2P11161 476 aaPredicted RBP8.37□□□□□ -1.07
NPAS3-205ENST00000547068 GATA3P23771 443 aa8.37□□□□□ -1.07
NPAS3-205ENST00000547068 PLGLAQ15195 96 aa8.37□□□□□ -1.07
NPAS3-205ENST00000547068 PRR30Q53SZ7 412 aaPredicted RBP8.37□□□□□ -1.07
NPAS3-205ENST00000547068 GLMPQ8WWB7 406 aa8.37□□□□□ -1.07
NPAS3-205ENST00000547068 RPEQ96AT9 228 aa8.37□□□□□ -1.07
NPAS3-205ENST00000547068 AAMDCQ9H7C9 122 aa8.37□□□□□ -1.07
NPAS3-205ENST00000547068 MSRB1Q9NZV6 116 aa8.37□□□□□ -1.07
NPAS3-205ENST00000547068 SS18L2Q9UHA2 77 aa8.37□□□□□ -1.07
NPAS3-205ENST00000547068 TLN1Q9Y490 2541 aaKnown RBP8.37□□□□□ -1.07
NPAS3-205ENST00000547068 TRBV7-3A0A075B6L6 115 aa8.37□□□□□ -1.07
NPAS3-205ENST00000547068 H3BRN7 92 aa8.37□□□□□ -1.07
NPAS3-205ENST00000547068 GLRXP35754 106 aa8.37□□□□□ -1.07
NPAS3-205ENST00000547068 SMCPP49901 116 aaPredicted RBP8.37□□□□□ -1.07
NPAS3-205ENST00000547068 FHL3Q13643 280 aa8.37□□□□□ -1.07
NPAS3-205ENST00000547068 FAM57AQ8TBR7 257 aa8.37□□□□□ -1.07
NPAS3-205ENST00000547068 DLX4Q92988 240 aaPredicted RBP8.37□□□□□ -1.07
NPAS3-205ENST00000547068 SLC25A15Q9Y619 301 aa8.37□□□□□ -1.07
NPAS3-205ENST00000547068 IGKV1-17P01599 117 aa8.36□□□□□ -1.07
NPAS3-205ENST00000547068 MORN3Q6PF18 240 aaPredicted RBP8.36□□□□□ -1.07
NPAS3-205ENST00000547068 PGPEP1Q9NXJ5 209 aa8.36□□□□□ -1.07
NPAS3-205ENST00000547068 SPENQ96T58 3664 aaKnown RBP8.36□□□□□ -1.07
NPAS3-205ENST00000547068 SPTA1P02549 2419 aa8.36□□□□□ -1.07
NPAS3-205ENST00000547068 ZGRF1Q86YA3 2104 aa8.36□□□□□ -1.07
NPAS3-205ENST00000547068 IGHV1-46P01743 117 aa8.36□□□□□ -1.07
NPAS3-205ENST00000547068 IL4P05112 153 aa8.36□□□□□ -1.07
NPAS3-205ENST00000547068 IGLC6P0CF74 106 aa8.36□□□□□ -1.07
NPAS3-205ENST00000547068 TMEM200BQ69YZ2 307 aa8.36□□□□□ -1.07
NPAS3-205ENST00000547068 MYOZ3Q8TDC0 251 aa8.36□□□□□ -1.07
NPAS3-205ENST00000547068 ANAPC13Q9BS18 74 aa8.36□□□□□ -1.07
NPAS3-205ENST00000547068 PRRC2CQ9Y520 2896 aaKnown RBP8.35□□□□□ -1.07
NPAS3-205ENST00000547068 IGLV3-9A0A075B6K5 115 aa8.35□□□□□ -1.07
NPAS3-205ENST00000547068 NDUFA3O95167 84 aa8.35□□□□□ -1.07
NPAS3-205ENST00000547068 CNTFRP26992 372 aa8.35□□□□□ -1.07
NPAS3-205ENST00000547068 PROCRQ9UNN8 238 aa8.35□□□□□ -1.07
NPAS3-205ENST00000547068 SMG1Q96Q15 3661 aaKnown RBP8.35□□□□□ -1.07
NPAS3-205ENST00000547068 IGKV2-40A0A087WW87 121 aaPredicted RBP8.35□□□□□ -1.07
NPAS3-205ENST00000547068 I3L2K1 104 aa8.35□□□□□ -1.07
NPAS3-205ENST00000547068 IGKV2D-40P01614 121 aaPredicted RBP8.35□□□□□ -1.07
NPAS3-205ENST00000547068 GATA1P15976 413 aaPredicted RBP8.35□□□□□ -1.07
NPAS3-205ENST00000547068 TEX36Q5VZQ5 186 aa8.35□□□□□ -1.07
NPAS3-205ENST00000547068 Q8N8P6 123 aa8.35□□□□□ -1.07
NPAS3-205ENST00000547068 RALYQ9UKM9 306 aaKnown RBP8.35□□□□□ -1.07
NPAS3-205ENST00000547068 A0A087WX48 190 aa8.34□□□□□ -1.07
NPAS3-205ENST00000547068 MRPS12O15235 138 aaKnown RBP8.34□□□□□ -1.07
NPAS3-205ENST00000547068 PSMB2P49721 201 aa8.34□□□□□ -1.07
NPAS3-205ENST00000547068 CFAP161Q6P656 301 aa8.34□□□□□ -1.07
NPAS3-205ENST00000547068 LINC00311Q8N616 119 aa8.34□□□□□ -1.07
NPAS3-205ENST00000547068 RNF125Q96EQ8 232 aa8.34□□□□□ -1.07
NPAS3-205ENST00000547068 PRR25Q96S07 402 aa8.34□□□□□ -1.07
NPAS3-205ENST00000547068 USP24Q9UPU5 2620 aa8.34□□□□□ -1.07
NPAS3-205ENST00000547068 ATRXP46100 2492 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms