RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 TXN2Q99757 166 aa9.12□□□□□ -0.95
CCDC38-202ENST00000546386 BAHCC1Q9P281 2608 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 PKD1L1Q8TDX9 2849 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 IGHV4OR15-8A0A075B7B6 117 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 A0A087WW49 117 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 FAM223BA6NKX1 122 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 SLURP1P55000 103 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 FAM223AQ8IWN6 122 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 NIT2Q9NQR4 276 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 NAGKQ9UJ70 344 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 FBN1P35555 2871 aaKnown RBP9.11□□□□□ -0.95
CCDC38-202ENST00000546386 STAB1Q9NY15 2570 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 SMIM27A0A1W2PRY6 76 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 M0QZK8 103 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 ORM1P02763 201 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 SRIP30626 198 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 PMCHL1Q16048 86 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 GPHB5Q86YW7 130 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 FAM19A2Q8N3H0 131 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 RPP21Q9H633 154 aaKnown RBP9.11□□□□□ -0.95
CCDC38-202ENST00000546386 PGPEP1Q9NXJ5 209 aa9.11□□□□□ -0.95
CCDC38-202ENST00000546386 PEF1Q9UBV8 284 aaKnown RBP9.11□□□□□ -0.95
CCDC38-202ENST00000546386 J3QL48 77 aa9.1□□□□□ -0.95
CCDC38-202ENST00000546386 SCGB2A1O75556 95 aa9.1□□□□□ -0.95
CCDC38-202ENST00000546386 ARMS2P0C7Q2 107 aa9.1□□□□□ -0.95
CCDC38-202ENST00000546386 CDX1P47902 265 aaPredicted RBP9.1□□□□□ -0.95
CCDC38-202ENST00000546386 PYY3Q5JQD4 70 aa9.1□□□□□ -0.95
CCDC38-202ENST00000546386 ZNF738Q8NE65 137 aa9.1□□□□□ -0.95
CCDC38-202ENST00000546386 HIST1H2BLQ99880 126 aa9.1□□□□□ -0.95
CCDC38-202ENST00000546386 TP53TG3Q9ULZ0 132 aa9.1□□□□□ -0.95
CCDC38-202ENST00000546386 J3QLI3 93 aa9.1□□□□□ -0.95
CCDC38-202ENST00000546386 CFHR3Q02985 330 aa9.1□□□□□ -0.95
CCDC38-202ENST00000546386 FOXE3Q13461 319 aa9.1□□□□□ -0.95
CCDC38-202ENST00000546386 TMEM136Q6ZRR5 245 aa9.1□□□□□ -0.95
CCDC38-202ENST00000546386 KLHDC1Q8N7A1 406 aa9.1□□□□□ -0.95
CCDC38-202ENST00000546386 DEFB104AQ8WTQ1 72 aa9.1□□□□□ -0.95
CCDC38-202ENST00000546386 PRSS22Q9GZN4 317 aa9.1□□□□□ -0.95
CCDC38-202ENST00000546386 AGPAT4-IT1Q9H0P7 198 aa9.1□□□□□ -0.95
CCDC38-202ENST00000546386 MSRB1Q9NZV6 116 aa9.1□□□□□ -0.95
CCDC38-202ENST00000546386 MAST4O15021 2626 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 DNAJC9-AS1A6NH13 148 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 K7EQM0 130 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 MEOX2P50222 304 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 KRTAP1-1Q07627 177 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 ZNF124Q15973 351 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 TCTEX1D4Q5JR98 221 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 BAGE3Q86Y29 109 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 PRR25Q96S07 402 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 GAR1Q9NY12 217 aaKnown RBP9.09□□□□□ -0.95
CCDC38-202ENST00000546386 TMEM213A2RRL7 107 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 C19orf71A6NCJ1 209 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 SH2D1AO60880 128 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 SERF1AO75920 110 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 FSHBP01225 129 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 CSN3P07498 182 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 TSKUQ8WUA8 353 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 MBD6Q96DN6 1003 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 PACRGQ96M98 296 aaPredicted RBP9.09□□□□□ -0.95
CCDC38-202ENST00000546386 LY96Q9Y6Y9 160 aa9.09□□□□□ -0.95
CCDC38-202ENST00000546386 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.08□□□□□ -0.96
CCDC38-202ENST00000546386 SERTM2A0A1B0GWG4 89 aa9.08□□□□□ -0.96
CCDC38-202ENST00000546386 AMBPP02760 352 aa9.08□□□□□ -0.96
CCDC38-202ENST00000546386 ZNF688P0C7X2 276 aa9.08□□□□□ -0.96
CCDC38-202ENST00000546386 CRISP2P16562 243 aa9.08□□□□□ -0.96
CCDC38-202ENST00000546386 LRRC75A-AS1Q8N1F1 130 aa9.08□□□□□ -0.96
CCDC38-202ENST00000546386 GRAMD2BQ96HH9 432 aa9.08□□□□□ -0.96
CCDC38-202ENST00000546386 NACAE9PAV3 2078 aa9.08□□□□□ -0.96
CCDC38-202ENST00000546386 TYMSP04818 313 aa9.08□□□□□ -0.96
CCDC38-202ENST00000546386 CT45A10P0DMU9 189 aa9.08□□□□□ -0.96
CCDC38-202ENST00000546386 FXYD7P58549 80 aa9.08□□□□□ -0.96
CCDC38-202ENST00000546386 PSG9Q00887 426 aa9.08□□□□□ -0.96
CCDC38-202ENST00000546386 HIST1H1AQ02539 215 aaPredicted RBP9.08□□□□□ -0.96
CCDC38-202ENST00000546386 PRR9Q5T870 116 aa9.08□□□□□ -0.96
CCDC38-202ENST00000546386 IZUMO1RA6ND01 250 aa9.07□□□□□ -0.96
CCDC38-202ENST00000546386 PRM2P04554 102 aa9.07□□□□□ -0.96
CCDC38-202ENST00000546386 LINC00310P59036 64 aa9.07□□□□□ -0.96
CCDC38-202ENST00000546386 PRDM13Q9H4Q3 707 aa9.07□□□□□ -0.96
CCDC38-202ENST00000546386 C11orf21Q9P2W6 132 aa9.07□□□□□ -0.96
CCDC38-202ENST00000546386 A0A0G2JLM5 398 aa9.07□□□□□ -0.96
CCDC38-202ENST00000546386 APCSP02743 223 aa9.07□□□□□ -0.96
CCDC38-202ENST00000546386 PMCHP20382 165 aa9.07□□□□□ -0.96
CCDC38-202ENST00000546386 NTF3P20783 257 aa9.07□□□□□ -0.96
CCDC38-202ENST00000546386 HOXD3P31249 432 aaPredicted RBP9.07□□□□□ -0.96
CCDC38-202ENST00000546386 OR11H1Q8NG94 326 aa9.07□□□□□ -0.96
CCDC38-202ENST00000546386 USMG5Q96IX5 58 aa9.07□□□□□ -0.96
CCDC38-202ENST00000546386 DAZ1Q9NQZ3 744 aaKnown RBP9.07□□□□□ -0.96
CCDC38-202ENST00000546386 ZNF253O75346 499 aa9.06□□□□□ -0.96
CCDC38-202ENST00000546386 C16orf54Q6UWD8 224 aa9.06□□□□□ -0.96
CCDC38-202ENST00000546386 LYZL1Q6UWQ5 148 aa9.06□□□□□ -0.96
CCDC38-202ENST00000546386 NDUFA4O00483 81 aa9.06□□□□□ -0.96
CCDC38-202ENST00000546386 HTN1P15515 57 aa9.06□□□□□ -0.96
CCDC38-202ENST00000546386 Q6ZSV7 163 aa9.06□□□□□ -0.96
CCDC38-202ENST00000546386 RNF114Q9Y508 228 aa9.06□□□□□ -0.96
CCDC38-202ENST00000546386 TRAV12-2A0A075B6T6 113 aa9.05□□□□□ -0.96
CCDC38-202ENST00000546386 A8MWL6 223 aa9.05□□□□□ -0.96
CCDC38-202ENST00000546386 SMKR1H3BMG3 65 aa9.05□□□□□ -0.96
CCDC38-202ENST00000546386 GAS8-AS1O95177 125 aa9.05□□□□□ -0.96
CCDC38-202ENST00000546386 CRIP2P52943 208 aaPredicted RBP9.05□□□□□ -0.96
CCDC38-202ENST00000546386 PDE6HQ13956 83 aa9.05□□□□□ -0.96
CCDC38-202ENST00000546386 TMEM190Q8WZ59 177 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms