RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 J3KRW8 73 aa12.71□□□□□ -0.37
CD9-211ENST00000546073 IFNA7P01567 189 aa12.71□□□□□ -0.37
CD9-211ENST00000546073 PPT1P50897 306 aa12.71□□□□□ -0.37
CD9-211ENST00000546073 ZNF138P52744 262 aa12.71□□□□□ -0.37
CD9-211ENST00000546073 C9orf47Q6ZRZ4 202 aa12.71□□□□□ -0.37
CD9-211ENST00000546073 SFT2D1Q8WV19 159 aa12.71□□□□□ -0.37
CD9-211ENST00000546073 TMED6Q8WW62 240 aa12.71□□□□□ -0.37
CD9-211ENST00000546073 IGKV2-40A0A087WW87 121 aaPredicted RBP12.7□□□□□ -0.38
CD9-211ENST00000546073 IGHV4-28A0A0C4DH34 117 aa12.7□□□□□ -0.38
CD9-211ENST00000546073 A0A1W2PRE2 83 aa12.7□□□□□ -0.38
CD9-211ENST00000546073 DIRC3C9JPN6 131 aa12.7□□□□□ -0.38
CD9-211ENST00000546073 H7BYZ3 331 aa12.7□□□□□ -0.38
CD9-211ENST00000546073 IGKV2D-40P01614 121 aaPredicted RBP12.7□□□□□ -0.38
CD9-211ENST00000546073 NMBP08949 121 aa12.7□□□□□ -0.38
CD9-211ENST00000546073 H2AFB1P0C5Y9 115 aa12.7□□□□□ -0.38
CD9-211ENST00000546073 HTN1P15515 57 aa12.7□□□□□ -0.38
CD9-211ENST00000546073 SUMO1P63165 101 aaKnown RBP12.7□□□□□ -0.38
CD9-211ENST00000546073 ERCC8Q13216 396 aa12.7□□□□□ -0.38
CD9-211ENST00000546073 ZNF705AQ6ZN79 300 aaPredicted RBP12.7□□□□□ -0.38
CD9-211ENST00000546073 C5orf17Q8NAS9 161 aa12.7□□□□□ -0.38
CD9-211ENST00000546073 FBLL1A6NHQ2 334 aaKnown RBP12.69□□□□□ -0.38
CD9-211ENST00000546073 CT45A10P0DMU9 189 aa12.69□□□□□ -0.38
CD9-211ENST00000546073 PRB4P10163 310 aaPredicted RBP12.69□□□□□ -0.38
CD9-211ENST00000546073 EMP1P54849 157 aa12.69□□□□□ -0.38
CD9-211ENST00000546073 TAS2R60P59551 318 aa12.69□□□□□ -0.38
CD9-211ENST00000546073 AGPAT4-IT1Q9H0P7 198 aa12.69□□□□□ -0.38
CD9-211ENST00000546073 TRBV7-9A0A0J9YWB2 115 aa12.68□□□□□ -0.38
CD9-211ENST00000546073 LOC102723971A0A1B0GUV8 181 aa12.68□□□□□ -0.38
CD9-211ENST00000546073 DEFB4AO15263 64 aa12.68□□□□□ -0.38
CD9-211ENST00000546073 SPART-AS1P0CW21 52 aa12.68□□□□□ -0.38
CD9-211ENST00000546073 FGF8P55075 233 aaPredicted RBP12.68□□□□□ -0.38
CD9-211ENST00000546073 GOLT1AQ6ZVE7 132 aa12.68□□□□□ -0.38
CD9-211ENST00000546073 ZNF492Q9P255 531 aa12.68□□□□□ -0.38
CD9-211ENST00000546073 LENEPQ9Y5L5 61 aa12.68□□□□□ -0.38
CD9-211ENST00000546073 X6R8D5 127 aa12.68□□□□□ -0.38
CD9-211ENST00000546073 A0A1B0GVG6 124 aa12.67□□□□□ -0.38
CD9-211ENST00000546073 C7orf71A4D174 169 aa12.67□□□□□ -0.38
CD9-211ENST00000546073 RNASE4P34096 147 aaKnown RBP12.67□□□□□ -0.38
CD9-211ENST00000546073 UBE2G2P60604 165 aa12.67□□□□□ -0.38
CD9-211ENST00000546073 CST9LP1Q5W188 147 aa12.67□□□□□ -0.38
CD9-211ENST00000546073 C1orf158Q8N1D5 194 aa12.67□□□□□ -0.38
CD9-211ENST00000546073 Q8NAQ8 132 aa12.67□□□□□ -0.38
CD9-211ENST00000546073 SUN5Q8TC36 379 aa12.67□□□□□ -0.38
CD9-211ENST00000546073 VGLL1Q99990 258 aa12.67□□□□□ -0.38
CD9-211ENST00000546073 KLK5Q9Y337 293 aaPredicted RBP12.67□□□□□ -0.38
CD9-211ENST00000546073 TRAV12-3A0A0B4J271 114 aa12.66□□□□□ -0.38
CD9-211ENST00000546073 PMS2P11Q13670 270 aa12.66□□□□□ -0.38
CD9-211ENST00000546073 ZNF726P1Q15940 193 aa12.66□□□□□ -0.38
CD9-211ENST00000546073 ZFAND6Q6FIF0 208 aa12.66□□□□□ -0.38
CD9-211ENST00000546073 ZNF493Q6ZR52 646 aa12.66□□□□□ -0.38
CD9-211ENST00000546073 PYGO2Q9BRQ0 406 aa12.66□□□□□ -0.38
CD9-211ENST00000546073 EPDR1Q9UM22 224 aa12.66□□□□□ -0.38
CD9-211ENST00000546073 NUPR2A6NF83 97 aa12.65□□□□□ -0.38
CD9-211ENST00000546073 RGS13O14921 159 aa12.65□□□□□ -0.38
CD9-211ENST00000546073 CRXO43186 299 aaPredicted RBP12.65□□□□□ -0.38
CD9-211ENST00000546073 GFI1BQ5VTD9 330 aa12.65□□□□□ -0.38
CD9-211ENST00000546073 C9orf62Q8N4C0 152 aa12.65□□□□□ -0.38
CD9-211ENST00000546073 CYB561D1Q8N8Q1 229 aa12.65□□□□□ -0.38
CD9-211ENST00000546073 MBD3L1Q8WWY6 194 aa12.65□□□□□ -0.38
CD9-211ENST00000546073 C16orf74Q96GX8 76 aa12.65□□□□□ -0.38
CD9-211ENST00000546073 TCEAL7Q9BRU2 100 aa12.65□□□□□ -0.38
CD9-211ENST00000546073 ATG101Q9BSB4 218 aa12.65□□□□□ -0.38
CD9-211ENST00000546073 ARL2-SNX15V9GYD0 113 aa12.65□□□□□ -0.38
CD9-211ENST00000546073 ZNF705GA8MUZ8 300 aaPredicted RBP12.64□□□□□ -0.39
CD9-211ENST00000546073 C11orf94C9JXX5 98 aa12.64□□□□□ -0.39
CD9-211ENST00000546073 TCRAP04437 139 aa12.64□□□□□ -0.39
CD9-211ENST00000546073 CRISP2P16562 243 aa12.64□□□□□ -0.39
CD9-211ENST00000546073 SSX7Q7RTT5 188 aa12.64□□□□□ -0.39
CD9-211ENST00000546073 HIST1H2BAQ96A08 127 aa12.64□□□□□ -0.39
CD9-211ENST00000546073 TMPRSS5Q9H3S3 457 aa12.64□□□□□ -0.39
CD9-211ENST00000546073 AGRNO00468 2067 aa12.64□□□□□ -0.39
CD9-211ENST00000546073 NBEAL2Q6ZNJ1 2754 aa12.64□□□□□ -0.39
CD9-211ENST00000546073 A0A1B0GV50 99 aa12.63□□□□□ -0.39
CD9-211ENST00000546073 SNURFLB1AK76 121 aa12.63□□□□□ -0.39
CD9-211ENST00000546073 IFNA1P01562 189 aa12.63□□□□□ -0.39
CD9-211ENST00000546073 RBMY1A1P0DJD3 496 aaKnown RBP12.63□□□□□ -0.39
CD9-211ENST00000546073 RBMY1CP0DJD4 496 aa12.63□□□□□ -0.39
CD9-211ENST00000546073 FHITP49789 147 aa12.63□□□□□ -0.39
CD9-211ENST00000546073 SULT1A2P50226 295 aa12.63□□□□□ -0.39
CD9-211ENST00000546073 UBE2G1P62253 170 aa12.63□□□□□ -0.39
CD9-211ENST00000546073 RBMY1FQ15415 496 aaKnown RBP12.63□□□□□ -0.39
CD9-211ENST00000546073 SAPCD1Q5SSQ6 148 aa12.63□□□□□ -0.39
CD9-211ENST00000546073 TREM1Q9NP99 234 aa12.63□□□□□ -0.39
CD9-211ENST00000546073 CBY3A6NI87 242 aa12.62□□□□□ -0.39
CD9-211ENST00000546073 GNG5P63218 68 aa12.62□□□□□ -0.39
CD9-211ENST00000546073 Q8TAT8 98 aa12.62□□□□□ -0.39
CD9-211ENST00000546073 MANBALQ9NQG1 85 aa12.62□□□□□ -0.39
CD9-211ENST00000546073 FAM74A7A6NL05 159 aa12.61□□□□□ -0.39
CD9-211ENST00000546073 KLLNB2CW77 178 aa12.61□□□□□ -0.39
CD9-211ENST00000546073 NANOS2P60321 138 aaKnown RBP12.61□□□□□ -0.39
CD9-211ENST00000546073 FLI1Q01543 452 aaPredicted RBP12.61□□□□□ -0.39
CD9-211ENST00000546073 CASC10Q5T4H9 136 aa12.61□□□□□ -0.39
CD9-211ENST00000546073 FAM159AQ6UWV7 190 aa12.61□□□□□ -0.39
CD9-211ENST00000546073 ZNF680Q8NEM1 530 aa12.61□□□□□ -0.39
CD9-211ENST00000546073 TMEM263Q8WUH6 116 aaKnown RBP12.61□□□□□ -0.39
CD9-211ENST00000546073 YTHDF2Q9Y5A9 579 aaKnown RBP12.61□□□□□ -0.39
CD9-211ENST00000546073 TIMM8BQ9Y5J9 83 aaPredicted RBP12.61□□□□□ -0.39
CD9-211ENST00000546073 COL7A1Q02388 2944 aa12.6□□□□□ -0.39
CD9-211ENST00000546073 LYRM9A8MSI8 78 aa12.6□□□□□ -0.39
CD9-211ENST00000546073 GGTLC3B5MD39 225 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms