RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 TRAV40A0A0B4J280 105 aa4.59□□□□□ -1.68
VPS50-220ENST00000544910 OVOL1O14753 267 aa4.59□□□□□ -1.68
VPS50-220ENST00000544910 IGLL1P15814 213 aa4.59□□□□□ -1.68
VPS50-220ENST00000544910 EVI2AP22794 236 aa4.59□□□□□ -1.68
VPS50-220ENST00000544910 DYNLRB2Q8TF09 96 aa4.59□□□□□ -1.68
VPS50-220ENST00000544910 ZC2HC1AQ96GY0 325 aa4.59□□□□□ -1.68
VPS50-220ENST00000544910 JMJD8Q96S16 334 aa4.59□□□□□ -1.68
VPS50-220ENST00000544910 IGKV1OR2-108A0A075B7D4 117 aa4.59□□□□□ -1.68
VPS50-220ENST00000544910 I3L2K1 104 aa4.59□□□□□ -1.68
VPS50-220ENST00000544910 CCL25O15444 150 aa4.59□□□□□ -1.68
VPS50-220ENST00000544910 SAA4P35542 130 aa4.59□□□□□ -1.68
VPS50-220ENST00000544910 PMVKQ15126 192 aa4.59□□□□□ -1.68
VPS50-220ENST00000544910 LGALS9BQ3B8N2 356 aa4.59□□□□□ -1.68
VPS50-220ENST00000544910 IGFL4Q6B9Z1 124 aa4.59□□□□□ -1.68
VPS50-220ENST00000544910 LGALS9CQ6DKI2 356 aa4.59□□□□□ -1.68
VPS50-220ENST00000544910 OR11H6Q8NGC7 330 aa4.59□□□□□ -1.68
VPS50-220ENST00000544910 CACNA1EQ15878 2313 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 TRAV21A0A0B4J279 112 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 C22orf46C9J442 243 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 H3BMM0 161 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 FCN3O75636 299 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 GNLYP22749 145 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 ERCC8Q13216 396 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 ZC2HC1BQ5TFG8 222 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 DMRTC2Q8IXT2 367 aaPredicted RBP4.58□□□□□ -1.68
VPS50-220ENST00000544910 DEFB125Q8N687 156 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 UBE2WQ96B02 151 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 TRAV12-3A0A0B4J271 114 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 E7EUB6 86 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 ATP6V0E1O15342 81 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 NUPR1O60356 82 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 IGHV3-11P01762 117 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 ZNF688P0C7X2 276 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 TMEM219Q86XT9 240 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 ZNF503Q96F45 646 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 C9JAW5 83 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 NCR2O95944 276 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 INAFM2P0DMQ5 153 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 PPIFP30405 207 aaKnown RBP4.58□□□□□ -1.68
VPS50-220ENST00000544910 RRN3P1Q2M238 152 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 NEGR1Q7Z3B1 354 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 C1QTNF4Q9BXJ3 329 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 TEX22C9J3V5 150 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 ZNF138P52744 262 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 ETDBQ3ZM63 59 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 DUX5Q96PT3 197 aa4.58□□□□□ -1.68
VPS50-220ENST00000544910 SLC25A20O43772 301 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 GRNP28799 593 aaKnown RBP4.57□□□□□ -1.68
VPS50-220ENST00000544910 FAM120AOSQ5T036 256 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 BPESC1Q9GZL8 116 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 TRACP01848 142 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 C9orf139Q6ZV77 190 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 AMN1Q8IY45 258 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 ZNF491Q8N8L2 437 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 VGLL1Q99990 258 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 ARHGAP21Q5T5U3 1957 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 CNTRLQ7Z7A1 2325 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 NCOA6Q14686 2063 aaPredicted RBP4.57□□□□□ -1.68
VPS50-220ENST00000544910 TMEM213A2RRL7 107 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 NDPQ00604 133 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 UNQ6494/PRO21346Q6UXR6 183 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 C1orf122Q6ZSJ8 110 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 Q8NA96 180 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 DNAJC30Q96LL9 226 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 NPFFR1Q9GZQ6 430 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 CEP290O15078 2479 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 RUSC1-AS1Q66K80 236 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 C17orf77Q96MU5 243 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 LINC00527Q9UJ94 153 aa4.57□□□□□ -1.68
VPS50-220ENST00000544910 IGKV1D-37A0A075B6S9 117 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 DSCR9P59020 149 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 FAM104BQ5XKR9 115 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 IL17RELQ6ZVW7 336 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 SMKR1H3BMG3 65 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 FXYD7P58549 80 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 HIST1H4AP62805 103 aaKnown RBP4.56□□□□□ -1.68
VPS50-220ENST00000544910 GAGE2AQ6NT46 116 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 CEND1Q8N111 149 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 GLMPQ8WWB7 406 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 TMEM158Q8WZ71 300 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 USMG5Q96IX5 58 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 WI2-2373I1.2A0A1W2PRP0 233 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 K7EIM0 57 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 C22orf34Q6ZV56 151 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 LINC00477Q96M19 166 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 PRR25Q96S07 402 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 TMEM126AQ9H061 195 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 MRPL36Q9P0J6 103 aaKnown RBP4.56□□□□□ -1.68
VPS50-220ENST00000544910 IGLV1-47P01700 117 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 BRD3OSQ6XYD6 125 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 RNASE8Q8TDE3 154 aaKnown RBP4.56□□□□□ -1.68
VPS50-220ENST00000544910 TRIOBPQ9H2D6 2365 aa4.56□□□□□ -1.68
VPS50-220ENST00000544910 CRYGCP07315 174 aa4.55□□□□□ -1.68
VPS50-220ENST00000544910 CD28P10747 220 aa4.55□□□□□ -1.68
VPS50-220ENST00000544910 TRBV6-1A0A0K0K1D8 114 aa4.55□□□□□ -1.68
VPS50-220ENST00000544910 VCYO14598 125 aa4.55□□□□□ -1.68
VPS50-220ENST00000544910 IGLV2-8P01709 118 aa4.55□□□□□ -1.68
VPS50-220ENST00000544910 MRPL51Q4U2R6 128 aaKnown RBP4.55□□□□□ -1.68
VPS50-220ENST00000544910 YLPM1P49750 1951 aaKnown RBP4.55□□□□□ -1.68
VPS50-220ENST00000544910 MYO7BQ6PIF6 2116 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms