RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	CCNK	O75909	580 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	IGHV3-48	P01763	117 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	IL7	P13232	177 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	MYL9	P24844	172 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	SDC2	P34741	201 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	G6PC	P35575	357 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	FXYD4	P59646	89 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	DAD1	P61803	113 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	PRCD	Q00LT1	54 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	GFI1B	Q5VTD9	330 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	OR51S1	Q8NGJ8	323 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	LYPD6B	Q8NI32	183 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	LGALS14	Q8TCE9	139 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	MITD1	Q8WV92	249 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	SDHC	Q99643	169 aa	Predicted RBP	4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	SRR	Q9GZT4	340 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	C20orf85	Q9H1P6	137 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	TXNL4B	Q9NX01	149 aa	Known RBP	4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	GOLT1B	Q9Y3E0	138 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585		V9GYH0	126 aa		4.17	□□□□□ -1.74
CPSF7-222	ENST00000544585	LRP1B	Q9NZR2	4599 aa		4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585	FABP12	A6NFH5	140 aa		4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585	CENPX	A8MT69	81 aa		4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585	INS-IGF2	F8WCM5	200 aa		4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585	HLA-DRB4	P13762	266 aa		4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585	S100G	P29377	79 aa		4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585	CBX5	P45973	191 aa		4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585	OR10A3	P58181	314 aa		4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585	RRN3P1	Q2M238	152 aa		4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585	TTC32	Q5I0X7	151 aa		4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585	SPATA31B1P	Q5VZV4	182 aa		4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585	LPCAT3	Q6P1A2	487 aa		4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585	OR4X1	Q8NH49	305 aa		4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585		Q8WTZ3	238 aa		4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585	C7orf50	Q9BRJ6	194 aa	Known RBP	4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585	KRTAP4-7	Q9BYR0	210 aa		4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585	HLA-DRB4	X5D2U9	266 aa		4.16	□□□□□ -1.74
CPSF7-222	ENST00000544585	NACA	E9PAV3	2078 aa		4.15	□□□□□ -1.74
CPSF7-222	ENST00000544585		A0A0A6YYH2	397 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585		A0A1W2PPV4	95 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585		A6NJ64	397 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	LYRM9	A8MSI8	78 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	FAM25A	B3EWG3	89 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	FAM25C	B3EWG5	89 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	FAM25G	B3EWG6	89 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	GPR31	O00270	319 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	EIF3G	O75821	320 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	SERF1A	O75920	110 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	S100A6	P06703	90 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	PTHLH	P12272	177 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	HLA-DMA	P28067	261 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	CLINT1	Q14677	625 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	ZNF79	Q15937	498 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	PYDC2	Q56P42	97 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	LCE1A	Q5T7P2	110 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	TRIQK	Q629K1	86 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	ENKUR	Q8TC29	256 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	DIRAS2	Q96HU8	199 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	PAXX	Q9BUH6	204 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	KRTAP4-11	Q9BYQ6	195 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	MIXL1	Q9H2W2	232 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	DIABLO	Q9NR28	239 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	LINC00588	Q9Y4M8	146 aa		4.15	□□□□□ -1.75
CPSF7-222	ENST00000544585	FAM231B	A6NCW3	169 aa		4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	KRTAP16-1	A8MUX0	517 aa		4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585		F5H768	121 aa		4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	MRPS12	O15235	138 aa	Known RBP	4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	GSTZ1	O43708	216 aa	Predicted RBP	4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	IFNA5	P01569	189 aa		4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	ATP5G1	P05496	136 aa		4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	ATP5G3	P48201	142 aa		4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	INPP1	P49441	399 aa		4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	YPEL3	P61236	119 aa	Predicted RBP	4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	PSG9	Q00887	426 aa		4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	MXD1	Q05195	221 aa		4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	USF2	Q15853	346 aa	Predicted RBP	4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585		Q5VSD8	79 aa		4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	FOXI2	Q6ZQN5	318 aa		4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	SLC51B	Q86UW2	128 aa		4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	TCTE3	Q8IZS6	198 aa		4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	OR4B1	Q8NGF8	309 aa		4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	OR52E5	Q8NH55	327 aa		4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	C18orf15	Q96N68	181 aa		4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	SAV1	Q9H4B6	383 aa	Predicted RBP	4.14	□□□□□ -1.75
CPSF7-222	ENST00000544585	PLA2G10	O15496	165 aa		4.13	□□□□□ -1.75
CPSF7-222	ENST00000544585	HPGDS	O60760	199 aa		4.13	□□□□□ -1.75
CPSF7-222	ENST00000544585	ATG12	O94817	140 aa		4.13	□□□□□ -1.75
CPSF7-222	ENST00000544585	IGKV1-17	P01599	117 aa		4.13	□□□□□ -1.75
CPSF7-222	ENST00000544585	SLC25A4	P12235	298 aa		4.13	□□□□□ -1.75
CPSF7-222	ENST00000544585	OPRK1	P41145	380 aa		4.13	□□□□□ -1.75
CPSF7-222	ENST00000544585	FXYD7	P58549	80 aa		4.13	□□□□□ -1.75
CPSF7-222	ENST00000544585	IFITM2	Q01629	132 aa		4.13	□□□□□ -1.75
CPSF7-222	ENST00000544585	EBLN2	Q6P2I7	272 aa		4.13	□□□□□ -1.75
CPSF7-222	ENST00000544585	SSX7	Q7RTT5	188 aa		4.13	□□□□□ -1.75
CPSF7-222	ENST00000544585	KRTAP7-1	Q8IUC3	87 aa		4.13	□□□□□ -1.75
CPSF7-222	ENST00000544585	C1orf158	Q8N1D5	194 aa		4.13	□□□□□ -1.75
CPSF7-222	ENST00000544585	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms