RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 NPCDR1Q9BY65 106 aa9.17□□□□□ -0.94
RTN3-212ENST00000543123 LINC00588Q9Y4M8 146 aa9.17□□□□□ -0.94
RTN3-212ENST00000543123 C7orf71A4D174 169 aa9.16□□□□□ -0.94
RTN3-212ENST00000543123 E5RGE8 158 aa9.16□□□□□ -0.94
RTN3-212ENST00000543123 TMEM78Q5T7P6 136 aa9.16□□□□□ -0.94
RTN3-212ENST00000543123 TRGV2A0A075B6R0 118 aa9.15□□□□□ -0.94
RTN3-212ENST00000543123 M0R3E3 92 aa9.15□□□□□ -0.94
RTN3-212ENST00000543123 NMBP08949 121 aa9.15□□□□□ -0.94
RTN3-212ENST00000543123 CYCSP99999 105 aaKnown RBP9.15□□□□□ -0.94
RTN3-212ENST00000543123 OR5C1Q8NGR4 320 aa9.15□□□□□ -0.94
RTN3-212ENST00000543123 BLNKQ8WV28 456 aa9.15□□□□□ -0.94
RTN3-212ENST00000543123 LINC00467Q9BRT7 94 aa9.15□□□□□ -0.94
RTN3-212ENST00000543123 NMES1Q9C002 83 aa9.15□□□□□ -0.94
RTN3-212ENST00000543123 KLLNB2CW77 178 aa9.14□□□□□ -0.95
RTN3-212ENST00000543123 C17orf112F2Z3M2 114 aa9.14□□□□□ -0.95
RTN3-212ENST00000543123 PRAF2O60831 178 aa9.14□□□□□ -0.95
RTN3-212ENST00000543123 NDUFB4O95168 129 aa9.14□□□□□ -0.95
RTN3-212ENST00000543123 GPX1P07203 203 aa9.14□□□□□ -0.95
RTN3-212ENST00000543123 PYYP10082 97 aa9.14□□□□□ -0.95
RTN3-212ENST00000543123 EIF4E3Q8N5X7 224 aaKnown RBP9.14□□□□□ -0.95
RTN3-212ENST00000543123 THAP6Q8TBB0 222 aa9.14□□□□□ -0.95
RTN3-212ENST00000543123 C18orf15Q96N68 181 aa9.14□□□□□ -0.95
RTN3-212ENST00000543123 MRPL32Q9BYC8 188 aaKnown RBP9.14□□□□□ -0.95
RTN3-212ENST00000543123 TMPRSS5Q9H3S3 457 aa9.14□□□□□ -0.95
RTN3-212ENST00000543123 Q9H8V8 135 aa9.14□□□□□ -0.95
RTN3-212ENST00000543123 PTTG2Q9NZH5 202 aa9.14□□□□□ -0.95
RTN3-212ENST00000543123 A0A0J9YY99 117 aa9.13□□□□□ -0.95
RTN3-212ENST00000543123 CRISP2P16562 243 aa9.13□□□□□ -0.95
RTN3-212ENST00000543123 BTF3P20290 206 aaKnown RBP9.13□□□□□ -0.95
RTN3-212ENST00000543123 HOXA5P20719 270 aa9.13□□□□□ -0.95
RTN3-212ENST00000543123 RNASE4P34096 147 aaKnown RBP9.13□□□□□ -0.95
RTN3-212ENST00000543123 ERCC8Q13216 396 aa9.13□□□□□ -0.95
RTN3-212ENST00000543123 ICAM4Q14773 271 aa9.13□□□□□ -0.95
RTN3-212ENST00000543123 ANXA2RQ3ZCQ2 193 aa9.13□□□□□ -0.95
RTN3-212ENST00000543123 C9orf47Q6ZRZ4 202 aa9.13□□□□□ -0.95
RTN3-212ENST00000543123 Q6ZTI0 123 aa9.13□□□□□ -0.95
RTN3-212ENST00000543123 ZNF575Q86XF7 245 aa9.13□□□□□ -0.95
RTN3-212ENST00000543123 EXOC3-AS1Q8N2X6 119 aa9.13□□□□□ -0.95
RTN3-212ENST00000543123 UPK3BQ9BT76 320 aa9.13□□□□□ -0.95
RTN3-212ENST00000543123 SLC25A2Q9BXI2 301 aa9.13□□□□□ -0.95
RTN3-212ENST00000543123 RYR1P21817 5038 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 TRGV1A0A0A0MS02 117 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 A0A1W2PPQ1 181 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 C16orf90A8MZG2 172 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 RGS13O14921 159 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 NBEAP1P0C6P0 100 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 PET100P0DJ07 73 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 CSN1S1P47710 185 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 NHLH2Q02577 135 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 TNP2Q05952 138 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 BTN1A1Q13410 526 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 LRRC37A5PQ49AS3 106 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 GCSAMLQ5JQS6 135 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 IBA57Q5T440 356 aaKnown RBP9.12□□□□□ -0.95
RTN3-212ENST00000543123 FAM122CQ6P4D5 195 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 FAM19A4Q96LR4 140 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 ARPC5LQ9BPX5 153 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 AGPAT4-IT1Q9H0P7 198 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 OR51M1Q9H341 326 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 Q9H3A6 140 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 GSN-AS1Q9NRJ2 163 aa9.12□□□□□ -0.95
RTN3-212ENST00000543123 MRPS16Q9Y3D3 137 aaKnown RBP9.12□□□□□ -0.95
RTN3-212ENST00000543123 TRBV7-9A0A0J9YWB2 115 aa9.11□□□□□ -0.95
RTN3-212ENST00000543123 ZNF324O75467 553 aaPredicted RBP9.11□□□□□ -0.95
RTN3-212ENST00000543123 UPK1BO75841 260 aa9.11□□□□□ -0.95
RTN3-212ENST00000543123 TCL1AP56279 114 aa9.11□□□□□ -0.95
RTN3-212ENST00000543123 CD300CQ08708 224 aa9.11□□□□□ -0.95
RTN3-212ENST00000543123 MIR17HGQ75NE6 70 aa9.11□□□□□ -0.95
RTN3-212ENST00000543123 C11orf72Q8NBR9 251 aa9.11□□□□□ -0.95
RTN3-212ENST00000543123 PAXXQ9BUH6 204 aa9.11□□□□□ -0.95
RTN3-212ENST00000543123 WDR61Q9GZS3 305 aaKnown RBP9.11□□□□□ -0.95
RTN3-212ENST00000543123 FUT9Q9Y231 359 aa9.11□□□□□ -0.95
RTN3-212ENST00000543123 IGKV2-40A0A087WW87 121 aaPredicted RBP9.1□□□□□ -0.95
RTN3-212ENST00000543123 OR7C2O60412 319 aa9.1□□□□□ -0.95
RTN3-212ENST00000543123 SIX6O95475 246 aa9.1□□□□□ -0.95
RTN3-212ENST00000543123 IGKV2D-40P01614 121 aaPredicted RBP9.1□□□□□ -0.95
RTN3-212ENST00000543123 ZNF138P52744 262 aa9.1□□□□□ -0.95
RTN3-212ENST00000543123 SLAQ13239 276 aa9.1□□□□□ -0.95
RTN3-212ENST00000543123 LYPD1Q8N2G4 141 aa9.1□□□□□ -0.95
RTN3-212ENST00000543123 FAM167A-AS1Q96KT0 104 aa9.1□□□□□ -0.95
RTN3-212ENST00000543123 ATP5SQ99766 215 aa9.1□□□□□ -0.95
RTN3-212ENST00000543123 OR5AC2Q9NZP5 309 aa9.1□□□□□ -0.95
RTN3-212ENST00000543123 ZNF492Q9P255 531 aa9.1□□□□□ -0.95
RTN3-212ENST00000543123 IGHV1OR15-1A0A075B7D0 117 aa9.09□□□□□ -0.95
RTN3-212ENST00000543123 INMT-MINDY4F8WBC2 141 aa9.09□□□□□ -0.95
RTN3-212ENST00000543123 SPINK4O60575 86 aa9.09□□□□□ -0.95
RTN3-212ENST00000543123 TAS2R45P59539 299 aa9.09□□□□□ -0.95
RTN3-212ENST00000543123 ZNF415Q09FC8 603 aa9.09□□□□□ -0.95
RTN3-212ENST00000543123 ESRGQ1W209 222 aa9.09□□□□□ -0.95
RTN3-212ENST00000543123 FXYD5Q96DB9 178 aa9.09□□□□□ -0.95
RTN3-212ENST00000543123 ST6GAL2Q96JF0 529 aa9.09□□□□□ -0.95
RTN3-212ENST00000543123 VGLL1Q99990 258 aa9.09□□□□□ -0.95
RTN3-212ENST00000543123 MUC4Q99102 2169 aa9.09□□□□□ -0.95
RTN3-212ENST00000543123 RBAKDNA6NC62 111 aa9.08□□□□□ -0.96
RTN3-212ENST00000543123 CDK2AP2O75956 126 aa9.08□□□□□ -0.96
RTN3-212ENST00000543123 IFNA5P01569 189 aa9.08□□□□□ -0.96
RTN3-212ENST00000543123 OR10J4P0C629 311 aa9.08□□□□□ -0.96
RTN3-212ENST00000543123 DEFA1P59665 94 aa9.08□□□□□ -0.96
RTN3-212ENST00000543123 DEFA3P59666 94 aa9.08□□□□□ -0.96
RTN3-212ENST00000543123 UBE2L3P68036 154 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms