RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 HBDP02042 147 aa12.9□□□□□ -0.34
KDM2B-216ENST00000543025 S100A7P31151 101 aa12.9□□□□□ -0.34
KDM2B-216ENST00000543025 TWIST1Q15672 202 aa12.9□□□□□ -0.34
KDM2B-216ENST00000543025 SMAD5-AS1Q9Y6J3 95 aa12.9□□□□□ -0.34
KDM2B-216ENST00000543025 CKS2P33552 79 aa12.9□□□□□ -0.34
KDM2B-216ENST00000543025 EBI3Q14213 229 aa12.9□□□□□ -0.34
KDM2B-216ENST00000543025 ERASQ7Z444 233 aa12.9□□□□□ -0.34
KDM2B-216ENST00000543025 VGLL1Q99990 258 aa12.9□□□□□ -0.34
KDM2B-216ENST00000543025 LRBAP50851 2863 aa12.9□□□□□ -0.34
KDM2B-216ENST00000543025 USP9XQ93008 2570 aaPredicted RBP12.9□□□□□ -0.34
KDM2B-216ENST00000543025 ARHGAP32A7KAX9 2087 aa12.89□□□□□ -0.35
KDM2B-216ENST00000543025 CSMD1Q96PZ7 3565 aa12.89□□□□□ -0.35
KDM2B-216ENST00000543025 DCHS2Q6V1P9 2916 aa12.89□□□□□ -0.35
KDM2B-216ENST00000543025 TMEM11P17152 192 aa12.89□□□□□ -0.35
KDM2B-216ENST00000543025 ZNF80P51504 273 aaPredicted RBP12.89□□□□□ -0.35
KDM2B-216ENST00000543025 C1orf122Q6ZSJ8 110 aa12.89□□□□□ -0.35
KDM2B-216ENST00000543025 ANKHD1Q8IWZ3 2542 aaKnown RBP12.89□□□□□ -0.35
KDM2B-216ENST00000543025 IGLC6P0CF74 106 aa12.89□□□□□ -0.35
KDM2B-216ENST00000543025 MINOS1Q5TGZ0 78 aa12.89□□□□□ -0.35
KDM2B-216ENST00000543025 OR1N2Q8NGR9 330 aa12.89□□□□□ -0.35
KDM2B-216ENST00000543025 MINOS1-NBL1R4GNA1 71 aa12.89□□□□□ -0.35
KDM2B-216ENST00000543025 IGHG4P01861 327 aa12.88□□□□□ -0.35
KDM2B-216ENST00000543025 SRSF2Q01130 221 aaKnown RBP12.88□□□□□ -0.35
KDM2B-216ENST00000543025 PAX8Q06710 450 aa12.88□□□□□ -0.35
KDM2B-216ENST00000543025 C11orf71Q6IPW1 123 aa12.88□□□□□ -0.35
KDM2B-216ENST00000543025 PIP4P2Q8N4L2 257 aa12.88□□□□□ -0.35
KDM2B-216ENST00000543025 DOPEY1Q5JWR5 2465 aa12.88□□□□□ -0.35
KDM2B-216ENST00000543025 IGHV7-81A0A0B4J1V7 117 aa12.88□□□□□ -0.35
KDM2B-216ENST00000543025 CBY3A6NI87 242 aa12.88□□□□□ -0.35
KDM2B-216ENST00000543025 SNAI2O43623 268 aa12.88□□□□□ -0.35
KDM2B-216ENST00000543025 IGFL4Q6B9Z1 124 aa12.88□□□□□ -0.35
KDM2B-216ENST00000543025 NPYP01303 97 aa12.87□□□□□ -0.35
KDM2B-216ENST00000543025 HLA-DMBP28068 263 aa12.87□□□□□ -0.35
KDM2B-216ENST00000543025 RBX1P62877 108 aa12.87□□□□□ -0.35
KDM2B-216ENST00000543025 CACNG7P62955 275 aa12.87□□□□□ -0.35
KDM2B-216ENST00000543025 ANKRD39Q53RE8 183 aa12.87□□□□□ -0.35
KDM2B-216ENST00000543025 SMKR1H3BMG3 65 aa12.87□□□□□ -0.35
KDM2B-216ENST00000543025 FGF6P10767 208 aa12.87□□□□□ -0.35
KDM2B-216ENST00000543025 FXYD7P58549 80 aa12.87□□□□□ -0.35
KDM2B-216ENST00000543025 J3QKU1 62 aa12.86□□□□□ -0.35
KDM2B-216ENST00000543025 ORM1P02763 201 aa12.86□□□□□ -0.35
KDM2B-216ENST00000543025 SEC11AP67812 179 aa12.86□□□□□ -0.35
KDM2B-216ENST00000543025 IFI27L1Q96BM0 104 aa12.86□□□□□ -0.35
KDM2B-216ENST00000543025 CNFNQ9BYD5 112 aa12.86□□□□□ -0.35
KDM2B-216ENST00000543025 IGHV3OR16-8A0A075B7F1 116 aa12.85□□□□□ -0.35
KDM2B-216ENST00000543025 FABP5P3A8MUU1 101 aa12.85□□□□□ -0.35
KDM2B-216ENST00000543025 FOXE3Q13461 319 aa12.85□□□□□ -0.35
KDM2B-216ENST00000543025 TMEM97Q5BJF2 176 aa12.85□□□□□ -0.35
KDM2B-216ENST00000543025 AMMECR1LQ6DCA0 310 aa12.85□□□□□ -0.35
KDM2B-216ENST00000543025 ZNF575Q86XF7 245 aa12.85□□□□□ -0.35
KDM2B-216ENST00000543025 Q8N9W7 124 aa12.85□□□□□ -0.35
KDM2B-216ENST00000543025 PEF1Q9UBV8 284 aaKnown RBP12.85□□□□□ -0.35
KDM2B-216ENST00000543025 IGHV3-35A0A0C4DH35 117 aa12.85□□□□□ -0.35
KDM2B-216ENST00000543025 PCP4P48539 62 aa12.85□□□□□ -0.35
KDM2B-216ENST00000543025 RAB9AP51151 201 aa12.85□□□□□ -0.35
KDM2B-216ENST00000543025 PPBPP02775 128 aa12.84□□□□□ -0.35
KDM2B-216ENST00000543025 BOD1L2Q8IYS8 172 aa12.84□□□□□ -0.35
KDM2B-216ENST00000543025 NPFFR1Q9GZQ6 430 aa12.84□□□□□ -0.35
KDM2B-216ENST00000543025 C15orf32Q32M92 178 aa12.84□□□□□ -0.35
KDM2B-216ENST00000543025 FAM110DQ8TAY7 271 aaPredicted RBP12.84□□□□□ -0.35
KDM2B-216ENST00000543025 MAP1LC3AQ9H492 121 aa12.84□□□□□ -0.35
KDM2B-216ENST00000543025 C7orf71A4D174 169 aa12.83□□□□□ -0.36
KDM2B-216ENST00000543025 ZNF502Q8TBZ5 544 aa12.83□□□□□ -0.36
KDM2B-216ENST00000543025 RNF185Q96GF1 192 aa12.83□□□□□ -0.36
KDM2B-216ENST00000543025 COL12A1Q99715 3063 aa12.83□□□□□ -0.36
KDM2B-216ENST00000543025 ABCA4P78363 2273 aa12.83□□□□□ -0.36
KDM2B-216ENST00000543025 BUB3O43684 328 aa12.83□□□□□ -0.36
KDM2B-216ENST00000543025 ZFP36P26651 326 aaKnown RBP12.83□□□□□ -0.36
KDM2B-216ENST00000543025 PRSS57Q6UWY2 283 aa12.83□□□□□ -0.36
KDM2B-216ENST00000543025 ZFAND3Q9H8U3 227 aa12.83□□□□□ -0.36
KDM2B-216ENST00000543025 MSRB1Q9NZV6 116 aa12.83□□□□□ -0.36
KDM2B-216ENST00000543025 RBAKDNA6NC62 111 aa12.82□□□□□ -0.36
KDM2B-216ENST00000543025 CDKN1BP46527 198 aa12.82□□□□□ -0.36
KDM2B-216ENST00000543025 ERCC8Q13216 396 aa12.82□□□□□ -0.36
KDM2B-216ENST00000543025 LINC01559Q495D7 138 aa12.82□□□□□ -0.36
KDM2B-216ENST00000543025 OR9G4Q8NGQ1 327 aa12.82□□□□□ -0.36
KDM2B-216ENST00000543025 PSMG3-AS1Q96PY0 264 aa12.82□□□□□ -0.36
KDM2B-216ENST00000543025 SMAD7O15105 426 aaKnown RBP12.82□□□□□ -0.36
KDM2B-216ENST00000543025 NDUFS7O75251 213 aa12.82□□□□□ -0.36
KDM2B-216ENST00000543025 ECSCRQ19T08 205 aa12.82□□□□□ -0.36
KDM2B-216ENST00000543025 SIRPDQ9H106 197 aa12.82□□□□□ -0.36
KDM2B-216ENST00000543025 TRAV8-6A0A0B4J262 113 aa12.81□□□□□ -0.36
KDM2B-216ENST00000543025 SLC50A1Q9BRV3 221 aa12.81□□□□□ -0.36
KDM2B-216ENST00000543025 LINC01546A6NGU7 62 aa12.81□□□□□ -0.36
KDM2B-216ENST00000543025 PRAC2D3DTV9 90 aa12.81□□□□□ -0.36
KDM2B-216ENST00000543025 SIVA1O15304 175 aa12.81□□□□□ -0.36
KDM2B-216ENST00000543025 GOSR1O95249 250 aa12.81□□□□□ -0.36
KDM2B-216ENST00000543025 CLEC3BP05452 202 aa12.81□□□□□ -0.36
KDM2B-216ENST00000543025 TENM4Q6N022 2769 aa12.8□□□□□ -0.36
KDM2B-216ENST00000543025 A1L4Q6 167 aa12.8□□□□□ -0.36
KDM2B-216ENST00000543025 C21orf62-AS1Q17RA5 79 aa12.8□□□□□ -0.36
KDM2B-216ENST00000543025 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.8□□□□□ -0.36
KDM2B-216ENST00000543025 HRNRQ86YZ3 2850 aaPredicted RBP12.8□□□□□ -0.36
KDM2B-216ENST00000543025 A6NDN8 102 aa12.8□□□□□ -0.36
KDM2B-216ENST00000543025 ATP6V0E1O15342 81 aa12.8□□□□□ -0.36
KDM2B-216ENST00000543025 KLK9Q2XQG4 91 aa12.8□□□□□ -0.36
KDM2B-216ENST00000543025 IL17RELQ6ZVW7 336 aa12.8□□□□□ -0.36
KDM2B-216ENST00000543025 DTX2Q86UW9 622 aa12.8□□□□□ -0.36
KDM2B-216ENST00000543025 RNF182Q8N6D2 247 aa12.8□□□□□ -0.36
KDM2B-216ENST00000543025 NXT2Q9NPJ8 142 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms