RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 LINC01560Q8TB33 94 aa10.05□□□□□ -0.8
DDX11-223ENST00000542838 IGHG4P01861 327 aa10.05□□□□□ -0.8
DDX11-223ENST00000542838 PRR30Q53SZ7 412 aaPredicted RBP10.05□□□□□ -0.8
DDX11-223ENST00000542838 TTC9CQ8N5M4 171 aa10.05□□□□□ -0.8
DDX11-223ENST00000542838 A0A1W2PPM0 123 aa10.05□□□□□ -0.8
DDX11-223ENST00000542838 FABP5P3A8MUU1 101 aa10.05□□□□□ -0.8
DDX11-223ENST00000542838 EVI2AP22794 236 aa10.05□□□□□ -0.8
DDX11-223ENST00000542838 FCER1GP30273 86 aa10.05□□□□□ -0.8
DDX11-223ENST00000542838 RIPPLY3P57055 190 aa10.05□□□□□ -0.8
DDX11-223ENST00000542838 NPFFR1Q9GZQ6 430 aa10.05□□□□□ -0.8
DDX11-223ENST00000542838 SPCS1Q9Y6A9 102 aa10.05□□□□□ -0.8
DDX11-223ENST00000542838 IGHV3-35A0A0C4DH35 117 aa10.04□□□□□ -0.8
DDX11-223ENST00000542838 LY6HO94772 140 aa10.04□□□□□ -0.8
DDX11-223ENST00000542838 PRSS1P07477 247 aa10.04□□□□□ -0.8
DDX11-223ENST00000542838 S100A7P31151 101 aa10.04□□□□□ -0.8
DDX11-223ENST00000542838 ERCC8Q13216 396 aa10.04□□□□□ -0.8
DDX11-223ENST00000542838 TNFRSF6BO95407 300 aa10.04□□□□□ -0.8
DDX11-223ENST00000542838 CTSGP08311 255 aa10.04□□□□□ -0.8
DDX11-223ENST00000542838 PPIFP30405 207 aaKnown RBP10.04□□□□□ -0.8
DDX11-223ENST00000542838 ODF1Q14990 250 aa10.04□□□□□ -0.8
DDX11-223ENST00000542838 IGKV2D-26A0A0A0MRZ7 120 aa10.03□□□□□ -0.8
DDX11-223ENST00000542838 SCGB2A1O75556 95 aa10.03□□□□□ -0.8
DDX11-223ENST00000542838 GCSHP23434 173 aa10.03□□□□□ -0.8
DDX11-223ENST00000542838 SRSF2Q01130 221 aaKnown RBP10.03□□□□□ -0.8
DDX11-223ENST00000542838 TTTY13Q9BZ97 58 aa10.03□□□□□ -0.8
DDX11-223ENST00000542838 NXT2Q9NPJ8 142 aaKnown RBP10.03□□□□□ -0.8
DDX11-223ENST00000542838 G3V4G9 280 aa10.03□□□□□ -0.8
DDX11-223ENST00000542838 SMIM13P0DJ93 91 aa10.03□□□□□ -0.8
DDX11-223ENST00000542838 GATA1P15976 413 aaPredicted RBP10.03□□□□□ -0.8
DDX11-223ENST00000542838 DYNAPQ8N1N2 210 aa10.03□□□□□ -0.8
DDX11-223ENST00000542838 OR5A1Q8NGJ0 315 aa10.03□□□□□ -0.8
DDX11-223ENST00000542838 BSNQ9UPA5 3926 aa10.03□□□□□ -0.8
DDX11-223ENST00000542838 TACC2O95359 2948 aa10.03□□□□□ -0.8
DDX11-223ENST00000542838 PIFOQ8TCI5 191 aa10.03□□□□□ -0.8
DDX11-223ENST00000542838 CNFNQ9BYD5 112 aa10.03□□□□□ -0.8
DDX11-223ENST00000542838 GVINP1Q7Z2Y8 2422 aa10.02□□□□□ -0.8
DDX11-223ENST00000542838 ANKRD11Q6UB99 2663 aaPredicted RBP10.02□□□□□ -0.8
DDX11-223ENST00000542838 LINC01546A6NGU7 62 aa10.02□□□□□ -0.81
DDX11-223ENST00000542838 ODF3BA8MYP8 253 aa10.02□□□□□ -0.81
DDX11-223ENST00000542838 FABP2P12104 132 aa10.02□□□□□ -0.81
DDX11-223ENST00000542838 FOXC2Q99958 501 aa10.02□□□□□ -0.81
DDX11-223ENST00000542838 ZMAT4Q9H898 229 aa10.02□□□□□ -0.81
DDX11-223ENST00000542838 HHLA3Q9XRX5 114 aa10.02□□□□□ -0.81
DDX11-223ENST00000542838 AKAP13Q12802 2813 aa10.02□□□□□ -0.81
DDX11-223ENST00000542838 PRAC2D3DTV9 90 aa10.02□□□□□ -0.81
DDX11-223ENST00000542838 IGKCP01834 107 aa10.02□□□□□ -0.81
DDX11-223ENST00000542838 SAMD5Q5TGI4 173 aa10.02□□□□□ -0.81
DDX11-223ENST00000542838 TMEM158Q8WZ71 300 aa10.02□□□□□ -0.81
DDX11-223ENST00000542838 FXYD2P54710 66 aa10.01□□□□□ -0.81
DDX11-223ENST00000542838 NEGR1Q7Z3B1 354 aa10.01□□□□□ -0.81
DDX11-223ENST00000542838 PIEZO2Q9H5I5 2752 aa10.01□□□□□ -0.81
DDX11-223ENST00000542838 LINC01559Q495D7 138 aa10.01□□□□□ -0.81
DDX11-223ENST00000542838 PSMG4Q5JS54 123 aa10.01□□□□□ -0.81
DDX11-223ENST00000542838 GTSCR1Q86UQ5 136 aa10.01□□□□□ -0.81
DDX11-223ENST00000542838 PSMG3-AS1Q96PY0 264 aa10.01□□□□□ -0.81
DDX11-223ENST00000542838 CHAC1Q9BUX1 264 aa10.01□□□□□ -0.81
DDX11-223ENST00000542838 HIGD1BQ9P298 99 aa10.01□□□□□ -0.81
DDX11-223ENST00000542838 M0R1W7 72 aa10.01□□□□□ -0.81
DDX11-223ENST00000542838 PRTN3P24158 256 aa10.01□□□□□ -0.81
DDX11-223ENST00000542838 IL17RELQ6ZVW7 336 aa10.01□□□□□ -0.81
DDX11-223ENST00000542838 DTX2Q86UW9 622 aa10.01□□□□□ -0.81
DDX11-223ENST00000542838 RNF182Q8N6D2 247 aa10.01□□□□□ -0.81
DDX11-223ENST00000542838 ATMQ13315 3056 aa10□□□□□ -0.81
DDX11-223ENST00000542838 FAM90A27PA6NNH2 459 aa10□□□□□ -0.81
DDX11-223ENST00000542838 TIMD4Q96H15 378 aa10□□□□□ -0.81
DDX11-223ENST00000542838 ATP5LO75964 103 aa9.99□□□□□ -0.81
DDX11-223ENST00000542838 DPM2O94777 84 aa9.99□□□□□ -0.81
DDX11-223ENST00000542838 GRNP28799 593 aaKnown RBP9.99□□□□□ -0.81
DDX11-223ENST00000542838 ZC2HC1BQ5TFG8 222 aa9.99□□□□□ -0.81
DDX11-223ENST00000542838 CCDC144NLQ6NUI1 221 aa9.99□□□□□ -0.81
DDX11-223ENST00000542838 VMO1Q7Z5L0 202 aa9.99□□□□□ -0.81
DDX11-223ENST00000542838 Q8N8P6 123 aa9.99□□□□□ -0.81
DDX11-223ENST00000542838 TTC28Q96AY4 2481 aa9.99□□□□□ -0.81
DDX11-223ENST00000542838 TMEM11P17152 192 aa9.99□□□□□ -0.81
DDX11-223ENST00000542838 VKORC1Q9BQB6 163 aa9.99□□□□□ -0.81
DDX11-223ENST00000542838 ABCA4P78363 2273 aa9.99□□□□□ -0.81
DDX11-223ENST00000542838 TRBV25-1A0A075B6N4 114 aa9.98□□□□□ -0.81
DDX11-223ENST00000542838 TMEM8BA6NDV4 472 aa9.98□□□□□ -0.81
DDX11-223ENST00000542838 TMEM160Q9NX00 188 aa9.98□□□□□ -0.81
DDX11-223ENST00000542838 SMPXQ9UHP9 88 aa9.98□□□□□ -0.81
DDX11-223ENST00000542838 IGHV7-81A0A0B4J1V7 117 aa9.98□□□□□ -0.81
DDX11-223ENST00000542838 IGKV3D-20A0A0C4DH25 116 aa9.98□□□□□ -0.81
DDX11-223ENST00000542838 IGHV3-66A0A0C4DH42 116 aa9.98□□□□□ -0.81
DDX11-223ENST00000542838 K7ERJ3 54 aa9.98□□□□□ -0.81
DDX11-223ENST00000542838 TRGV3P03979 118 aa9.98□□□□□ -0.81
DDX11-223ENST00000542838 Q8N6K4 173 aa9.98□□□□□ -0.81
DDX11-223ENST00000542838 CSMD1Q96PZ7 3565 aa9.98□□□□□ -0.81
DDX11-223ENST00000542838 SMIM17P0DL12 118 aa9.98□□□□□ -0.81
DDX11-223ENST00000542838 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.98□□□□□ -0.81
DDX11-223ENST00000542838 WNK2Q9Y3S1 2297 aa9.97□□□□□ -0.81
DDX11-223ENST00000542838 IGLV2-18A0A075B6J9 118 aa9.97□□□□□ -0.81
DDX11-223ENST00000542838 TRAV40A0A0B4J280 105 aa9.97□□□□□ -0.81
DDX11-223ENST00000542838 NHP2Q9NX24 153 aaKnown RBP9.97□□□□□ -0.81
DDX11-223ENST00000542838 C11orf21Q9P2W6 132 aa9.97□□□□□ -0.81
DDX11-223ENST00000542838 RBAKDNA6NC62 111 aa9.97□□□□□ -0.81
DDX11-223ENST00000542838 BUB3O43684 328 aa9.97□□□□□ -0.81
DDX11-223ENST00000542838 C15orf32Q32M92 178 aa9.97□□□□□ -0.81
DDX11-223ENST00000542838 MYOZ3Q8TDC0 251 aa9.97□□□□□ -0.81
DDX11-223ENST00000542838 IGHV3OR16-13A0A075B7E8 117 aa9.96□□□□□ -0.81
DDX11-223ENST00000542838 IGHV3-74A0A0B4J1X5 117 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms