RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 TMEM14EPQ6UXP3 125 aa8.81□□□□□ -1
CDH3-203ENST00000542274 GOLT1AQ6ZVE7 132 aa8.81□□□□□ -1
CDH3-203ENST00000542274 LSM4Q9Y4Z0 139 aaKnown RBP8.81□□□□□ -1
CDH3-203ENST00000542274 A0A0U1RQV1 116 aa8.8□□□□□ -1
CDH3-203ENST00000542274 PFN2P35080 140 aa8.8□□□□□ -1
CDH3-203ENST00000542274 ANKRD29Q8N6D5 301 aa8.8□□□□□ -1
CDH3-203ENST00000542274 CD177Q8N6Q3 437 aa8.8□□□□□ -1
CDH3-203ENST00000542274 ZNF525Q8N782 197 aa8.8□□□□□ -1
CDH3-203ENST00000542274 OR9G1Q8NH87 305 aa8.8□□□□□ -1
CDH3-203ENST00000542274 CXXC4Q9H2H0 198 aa8.8□□□□□ -1
CDH3-203ENST00000542274 TPSG1Q9NRR2 321 aa8.8□□□□□ -1
CDH3-203ENST00000542274 DCHS2Q6V1P9 2916 aa8.8□□□□□ -1
CDH3-203ENST00000542274 TRGV8A0A0C4DH27 118 aa8.8□□□□□ -1
CDH3-203ENST00000542274 OVOL1O14753 267 aa8.8□□□□□ -1
CDH3-203ENST00000542274 SPRY3O43610 288 aa8.8□□□□□ -1
CDH3-203ENST00000542274 C12orf74Q32Q52 190 aa8.8□□□□□ -1
CDH3-203ENST00000542274 TEX36Q5VZQ5 186 aa8.8□□□□□ -1
CDH3-203ENST00000542274 Q8IYB0 196 aa8.8□□□□□ -1
CDH3-203ENST00000542274 ZNF295-AS1Q8N0V1 137 aa8.8□□□□□ -1
CDH3-203ENST00000542274 DRAM1Q8N682 238 aa8.8□□□□□ -1
CDH3-203ENST00000542274 C9orf85Q96MD7 179 aa8.8□□□□□ -1
CDH3-203ENST00000542274 SLC25A10Q9UBX3 287 aaPredicted RBP8.8□□□□□ -1
CDH3-203ENST00000542274 SCO2A0A1W2PP80 73 aa8.79□□□□□ -1
CDH3-203ENST00000542274 NCR2O95944 276 aa8.79□□□□□ -1
CDH3-203ENST00000542274 IGKV1-5P01602 117 aa8.79□□□□□ -1
CDH3-203ENST00000542274 OR5AL1P0C617 328 aa8.79□□□□□ -1
CDH3-203ENST00000542274 IAPPP10997 89 aa8.79□□□□□ -1
CDH3-203ENST00000542274 RPL30P62888 115 aaKnown RBP8.79□□□□□ -1
CDH3-203ENST00000542274 CDSNQ15517 529 aa8.79□□□□□ -1
CDH3-203ENST00000542274 CHCHD1Q96BP2 118 aaKnown RBP8.79□□□□□ -1
CDH3-203ENST00000542274 ABHD14BQ96IU4 210 aa8.79□□□□□ -1
CDH3-203ENST00000542274 CHAC1Q9BUX1 264 aa8.79□□□□□ -1
CDH3-203ENST00000542274 CSMD1Q96PZ7 3565 aa8.79□□□□□ -1
CDH3-203ENST00000542274 TACC2O95359 2948 aa8.79□□□□□ -1
CDH3-203ENST00000542274 MPDU1O75352 247 aa8.79□□□□□ -1
CDH3-203ENST00000542274 ZNRF1Q8ND25 227 aa8.79□□□□□ -1
CDH3-203ENST00000542274 WIPF2Q8TF74 440 aaPredicted RBP8.79□□□□□ -1
CDH3-203ENST00000542274 ODF3Q96PU9 254 aa8.79□□□□□ -1
CDH3-203ENST00000542274 DSCR8Q96T75 97 aa8.79□□□□□ -1
CDH3-203ENST00000542274 CACNG5Q9UF02 275 aa8.79□□□□□ -1
CDH3-203ENST00000542274 TP53TG1Q9Y2A0 90 aa8.79□□□□□ -1
CDH3-203ENST00000542274 SPTBN1Q01082 2364 aaKnown RBP8.79□□□□□ -1
CDH3-203ENST00000542274 FXYD3Q14802 87 aa8.78□□□□□ -1
CDH3-203ENST00000542274 ZCCHC24Q8N2G6 241 aaKnown RBP8.78□□□□□ -1
CDH3-203ENST00000542274 OR11H6Q8NGC7 330 aa8.78□□□□□ -1
CDH3-203ENST00000542274 C20orf173Q96LM9 149 aa8.78□□□□□ -1
CDH3-203ENST00000542274 NPIPB6E9PJ23 425 aa8.78□□□□□ -1
CDH3-203ENST00000542274 FAM19A4Q96LR4 140 aa8.78□□□□□ -1
CDH3-203ENST00000542274 HIVEP3Q5T1R4 2406 aa8.77□□□□□ -1
CDH3-203ENST00000542274 IGKV1D-17A0A075B6S4 117 aa8.77□□□□□ -1.01
CDH3-203ENST00000542274 TMEM30CPA0ZSE6 113 aa8.77□□□□□ -1.01
CDH3-203ENST00000542274 PSMB2P49721 201 aa8.77□□□□□ -1.01
CDH3-203ENST00000542274 PMVKQ15126 192 aa8.77□□□□□ -1.01
CDH3-203ENST00000542274 TAF15Q92804 592 aaKnown RBP eCLIP8.77□□□□□ -1.01
CDH3-203ENST00000542274 A8MWV9 139 aa8.77□□□□□ -1.01
CDH3-203ENST00000542274 TMEM178BH3BS89 294 aa8.77□□□□□ -1.01
CDH3-203ENST00000542274 CLDN14O95500 239 aa8.77□□□□□ -1.01
CDH3-203ENST00000542274 DEFA4P12838 97 aa8.77□□□□□ -1.01
CDH3-203ENST00000542274 BRWD1-AS2P59051 145 aa8.77□□□□□ -1.01
CDH3-203ENST00000542274 TREML4Q6UXN2 200 aa8.77□□□□□ -1.01
CDH3-203ENST00000542274 ITLN1Q8WWA0 313 aa8.77□□□□□ -1.01
CDH3-203ENST00000542274 Q96MF0 132 aa8.77□□□□□ -1.01
CDH3-203ENST00000542274 DSCAMO60469 2012 aa8.77□□□□□ -1.01
CDH3-203ENST00000542274 UBE2L5PA0A1B0GUS4 154 aa8.76□□□□□ -1.01
CDH3-203ENST00000542274 SPINK9Q5DT21 86 aa8.76□□□□□ -1.01
CDH3-203ENST00000542274 STHQ8IWL8 128 aa8.76□□□□□ -1.01
CDH3-203ENST00000542274 DEFB108BQ8NET1 73 aa8.76□□□□□ -1.01
CDH3-203ENST00000542274 LEAP2Q969E1 77 aa8.76□□□□□ -1.01
CDH3-203ENST00000542274 HHLA3Q9XRX5 114 aa8.76□□□□□ -1.01
CDH3-203ENST00000542274 GDF5OSQ5U4N7 250 aa8.76□□□□□ -1.01
CDH3-203ENST00000542274 HIGD1BQ9P298 99 aa8.76□□□□□ -1.01
CDH3-203ENST00000542274 IZUMO1RA6ND01 250 aa8.75□□□□□ -1.01
CDH3-203ENST00000542274 C17orf98A8MV24 154 aa8.75□□□□□ -1.01
CDH3-203ENST00000542274 NPIPB11E5RHQ5 1161 aa8.75□□□□□ -1.01
CDH3-203ENST00000542274 H3BVH4 76 aa8.75□□□□□ -1.01
CDH3-203ENST00000542274 FOXA3P55318 350 aaPredicted RBP8.75□□□□□ -1.01
CDH3-203ENST00000542274 COL12A1Q99715 3063 aa8.75□□□□□ -1.01
CDH3-203ENST00000542274 CACNA1BQ00975 2339 aa8.75□□□□□ -1.01
CDH3-203ENST00000542274 ZFYVE26Q68DK2 2539 aa8.75□□□□□ -1.01
CDH3-203ENST00000542274 LINC00473A8K010 186 aa8.75□□□□□ -1.01
CDH3-203ENST00000542274 LTAP01374 205 aa8.75□□□□□ -1.01
CDH3-203ENST00000542274 EDDM3BP56851 147 aa8.75□□□□□ -1.01
CDH3-203ENST00000542274 ABHD12Q8N2K0 398 aa8.75□□□□□ -1.01
CDH3-203ENST00000542274 EPDR1Q9UM22 224 aa8.75□□□□□ -1.01
CDH3-203ENST00000542274 ABCA4P78363 2273 aa8.75□□□□□ -1.01
CDH3-203ENST00000542274 IGSF10Q6WRI0 2623 aa8.75□□□□□ -1.01
CDH3-203ENST00000542274 ASH1LQ9NR48 2969 aaKnown RBP8.75□□□□□ -1.01
CDH3-203ENST00000542274 TRAV2A0A0B4J234 112 aa8.74□□□□□ -1.01
CDH3-203ENST00000542274 USP24Q9UPU5 2620 aa8.74□□□□□ -1.01
CDH3-203ENST00000542274 TRGV11A0A075B6L2 103 aa8.74□□□□□ -1.01
CDH3-203ENST00000542274 SRRM5B3KS81 715 aa8.74□□□□□ -1.01
CDH3-203ENST00000542274 LY6LH3BQJ8 138 aa8.74□□□□□ -1.01
CDH3-203ENST00000542274 PROP1O75360 226 aa8.74□□□□□ -1.01
CDH3-203ENST00000542274 MLST8Q9BVC4 326 aa8.74□□□□□ -1.01
CDH3-203ENST00000542274 CFAP46Q8IYW2 2715 aa8.74□□□□□ -1.01
CDH3-203ENST00000542274 ANKHD1Q8IWZ3 2542 aaKnown RBP8.74□□□□□ -1.01
CDH3-203ENST00000542274 SMIM27A0A1W2PRY6 76 aa8.74□□□□□ -1.01
CDH3-203ENST00000542274 CCL21O00585 134 aa8.74□□□□□ -1.01
CDH3-203ENST00000542274 CRYGAP11844 174 aa8.74□□□□□ -1.01
CDH3-203ENST00000542274 FAM231DQ6ZW35 169 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms