RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 S100ZQ8WXG8 99 aa9.77□□□□□ -0.85
SUDS3-203ENST00000541591 PHYHIPLQ96FC7 376 aa9.77□□□□□ -0.85
SUDS3-203ENST00000541591 FAM167A-AS1Q96KT0 104 aa9.77□□□□□ -0.85
SUDS3-203ENST00000541591 VGLL1Q99990 258 aa9.77□□□□□ -0.85
SUDS3-203ENST00000541591 SMIM3Q9BZL3 60 aa9.77□□□□□ -0.85
SUDS3-203ENST00000541591 AGPAT4-IT1Q9H0P7 198 aa9.77□□□□□ -0.85
SUDS3-203ENST00000541591 GSN-AS1Q9NRJ2 163 aa9.77□□□□□ -0.85
SUDS3-203ENST00000541591 C7orf71A4D174 169 aa9.76□□□□□ -0.85
SUDS3-203ENST00000541591 HIST1H1EP10412 219 aaKnown RBP9.76□□□□□ -0.85
SUDS3-203ENST00000541591 ATP6V1FQ16864 119 aa9.76□□□□□ -0.85
SUDS3-203ENST00000541591 LINC00612Q8N6U2 182 aa9.76□□□□□ -0.85
SUDS3-203ENST00000541591 GNPNAT1Q96EK6 184 aaPredicted RBP9.76□□□□□ -0.85
SUDS3-203ENST00000541591 C20orf144Q9BQM9 153 aa9.76□□□□□ -0.85
SUDS3-203ENST00000541591 TMEM14CQ9P0S9 112 aa9.76□□□□□ -0.85
SUDS3-203ENST00000541591 TP53TG3Q9ULZ0 132 aa9.76□□□□□ -0.85
SUDS3-203ENST00000541591 E5RGE8 158 aa9.75□□□□□ -0.85
SUDS3-203ENST00000541591 INMT-MINDY4F8WBC2 141 aa9.75□□□□□ -0.85
SUDS3-203ENST00000541591 CCL18P55774 89 aa9.75□□□□□ -0.85
SUDS3-203ENST00000541591 H2BFSP57053 126 aa9.75□□□□□ -0.85
SUDS3-203ENST00000541591 SOHLH1Q5JUK2 328 aa9.75□□□□□ -0.85
SUDS3-203ENST00000541591 ODF3Q96PU9 254 aa9.75□□□□□ -0.85
SUDS3-203ENST00000541591 KRTAP1-5Q9BYS1 174 aa9.75□□□□□ -0.85
SUDS3-203ENST00000541591 KLF12Q9Y4X4 402 aa9.75□□□□□ -0.85
SUDS3-203ENST00000541591 HSPG2P98160 4391 aa9.75□□□□□ -0.85
SUDS3-203ENST00000541591 TRGV1A0A0A0MS02 117 aa9.74□□□□□ -0.85
SUDS3-203ENST00000541591 ZNF253O75346 499 aa9.74□□□□□ -0.85
SUDS3-203ENST00000541591 IGHV3-53P01767 116 aa9.74□□□□□ -0.85
SUDS3-203ENST00000541591 SLC25A5P05141 298 aaKnown RBP9.74□□□□□ -0.85
SUDS3-203ENST00000541591 C11orf72Q8NBR9 251 aa9.74□□□□□ -0.85
SUDS3-203ENST00000541591 FXYD5Q96DB9 178 aa9.74□□□□□ -0.85
SUDS3-203ENST00000541591 NMES1Q9C002 83 aa9.74□□□□□ -0.85
SUDS3-203ENST00000541591 WDR61Q9GZS3 305 aaKnown RBP9.74□□□□□ -0.85
SUDS3-203ENST00000541591 SLC25A31Q9H0C2 315 aa9.74□□□□□ -0.85
SUDS3-203ENST00000541591 AAMDCQ9H7C9 122 aa9.74□□□□□ -0.85
SUDS3-203ENST00000541591 LRP1BQ9NZR2 4599 aa9.73□□□□□ -0.85
SUDS3-203ENST00000541591 DNAH5Q8TE73 4624 aa9.73□□□□□ -0.85
SUDS3-203ENST00000541591 KLLNB2CW77 178 aa9.73□□□□□ -0.85
SUDS3-203ENST00000541591 OR7C2O60412 319 aa9.73□□□□□ -0.85
SUDS3-203ENST00000541591 MPDU1O75352 247 aa9.73□□□□□ -0.85
SUDS3-203ENST00000541591 GPX1P07203 203 aa9.73□□□□□ -0.85
SUDS3-203ENST00000541591 M6PRP20645 277 aa9.73□□□□□ -0.85
SUDS3-203ENST00000541591 C6orf223Q8N319 242 aa9.73□□□□□ -0.85
SUDS3-203ENST00000541591 CHAC2Q8WUX2 184 aa9.73□□□□□ -0.85
SUDS3-203ENST00000541591 PPP1R1CQ8WVI7 109 aa9.73□□□□□ -0.85
SUDS3-203ENST00000541591 MRPL53Q96EL3 112 aaKnown RBP9.73□□□□□ -0.85
SUDS3-203ENST00000541591 FAM19A4Q96LR4 140 aa9.73□□□□□ -0.85
SUDS3-203ENST00000541591 PYGO2Q9BRQ0 406 aa9.73□□□□□ -0.85
SUDS3-203ENST00000541591 PAXXQ9BUH6 204 aa9.73□□□□□ -0.85
SUDS3-203ENST00000541591 OR51M1Q9H341 326 aa9.73□□□□□ -0.85
SUDS3-203ENST00000541591 MRPL16Q9NX20 251 aaKnown RBP9.73□□□□□ -0.85
SUDS3-203ENST00000541591 ABCA13Q86UQ4 5058 aa9.72□□□□□ -0.85
SUDS3-203ENST00000541591 TRGV2A0A075B6R0 118 aa9.72□□□□□ -0.85
SUDS3-203ENST00000541591 A6NHS1 94 aa9.72□□□□□ -0.85
SUDS3-203ENST00000541591 SSNA1O43805 119 aa9.72□□□□□ -0.85
SUDS3-203ENST00000541591 ZNF324O75467 553 aaPredicted RBP9.72□□□□□ -0.85
SUDS3-203ENST00000541591 NBEAP1P0C6P0 100 aa9.72□□□□□ -0.85
SUDS3-203ENST00000541591 MED14OSP0DP75 135 aa9.72□□□□□ -0.85
SUDS3-203ENST00000541591 ESRGQ1W209 222 aa9.72□□□□□ -0.85
SUDS3-203ENST00000541591 FFAR4Q5NUL3 377 aa9.72□□□□□ -0.85
SUDS3-203ENST00000541591 MUC21Q5SSG8 566 aa9.72□□□□□ -0.85
SUDS3-203ENST00000541591 EIF4E3Q8N5X7 224 aaKnown RBP9.72□□□□□ -0.85
SUDS3-203ENST00000541591 ZFAND2AQ8N6M9 145 aa9.72□□□□□ -0.85
SUDS3-203ENST00000541591 RXFP4Q8TDU9 374 aa9.72□□□□□ -0.85
SUDS3-203ENST00000541591 ZNF503Q96F45 646 aa9.72□□□□□ -0.85
SUDS3-203ENST00000541591 RPH3ALQ9UNE2 315 aa9.72□□□□□ -0.85
SUDS3-203ENST00000541591 FUT9Q9Y231 359 aa9.72□□□□□ -0.85
SUDS3-203ENST00000541591 PRELID1Q9Y255 219 aa9.72□□□□□ -0.85
SUDS3-203ENST00000541591 RGS13O14921 159 aa9.71□□□□□ -0.86
SUDS3-203ENST00000541591 FAM3BP58499 235 aaPredicted RBP9.71□□□□□ -0.86
SUDS3-203ENST00000541591 RANP62826 216 aaKnown RBP9.71□□□□□ -0.86
SUDS3-203ENST00000541591 PDE6HQ13956 83 aa9.71□□□□□ -0.86
SUDS3-203ENST00000541591 TMEM78Q5T7P6 136 aa9.71□□□□□ -0.86
SUDS3-203ENST00000541591 C9orf47Q6ZRZ4 202 aa9.71□□□□□ -0.86
SUDS3-203ENST00000541591 VSIG2Q96IQ7 327 aa9.71□□□□□ -0.86
SUDS3-203ENST00000541591 LINC00477Q96M19 166 aa9.71□□□□□ -0.86
SUDS3-203ENST00000541591 ATP5SQ99766 215 aa9.71□□□□□ -0.86
SUDS3-203ENST00000541591 Q9H8V8 135 aa9.71□□□□□ -0.86
SUDS3-203ENST00000541591 PTTG2Q9NZH5 202 aa9.71□□□□□ -0.86
SUDS3-203ENST00000541591 HSPB11Q9Y547 144 aa9.71□□□□□ -0.86
SUDS3-203ENST00000541591 A0A096LPF7 62 aa9.7□□□□□ -0.86
SUDS3-203ENST00000541591 PRAF2O60831 178 aa9.7□□□□□ -0.86
SUDS3-203ENST00000541591 UBE2L3P68036 154 aaKnown RBP9.7□□□□□ -0.86
SUDS3-203ENST00000541591 LINC00299Q6ZSB3 139 aa9.7□□□□□ -0.86
SUDS3-203ENST00000541591 MRPL32Q9BYC8 188 aaKnown RBP9.7□□□□□ -0.86
SUDS3-203ENST00000541591 KRTAP4-5Q9BYR2 181 aa9.7□□□□□ -0.86
SUDS3-203ENST00000541591 Q9H3A6 140 aa9.7□□□□□ -0.86
SUDS3-203ENST00000541591 WFDC1Q9HC57 220 aa9.7□□□□□ -0.86
SUDS3-203ENST00000541591 ZNF492Q9P255 531 aa9.7□□□□□ -0.86
SUDS3-203ENST00000541591 MBD2Q9UBB5 411 aa9.7□□□□□ -0.86
SUDS3-203ENST00000541591 APOBP04114 4563 aaKnown RBP9.69□□□□□ -0.86
SUDS3-203ENST00000541591 C16orf90A8MZG2 172 aa9.69□□□□□ -0.86
SUDS3-203ENST00000541591 HMGB3O15347 200 aaKnown RBP9.69□□□□□ -0.86
SUDS3-203ENST00000541591 MPC2O95563 127 aa9.69□□□□□ -0.86
SUDS3-203ENST00000541591 CRISP2P16562 243 aa9.69□□□□□ -0.86
SUDS3-203ENST00000541591 DAZ2Q13117 558 aaKnown RBP9.69□□□□□ -0.86
SUDS3-203ENST00000541591 ZNF680Q8NEM1 530 aa9.69□□□□□ -0.86
SUDS3-203ENST00000541591 HYLS1Q96M11 299 aa9.69□□□□□ -0.86
SUDS3-203ENST00000541591 IGHV1OR15-1A0A075B7D0 117 aa9.68□□□□□ -0.86
SUDS3-203ENST00000541591 C17orf112F2Z3M2 114 aa9.68□□□□□ -0.86
SUDS3-203ENST00000541591 SPINK4O60575 86 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms