RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 A0A0J9YXY3 114 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 C7orf71A4D174 169 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 GGT3PA6NGU5 568 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 GGTLC3B5MD39 225 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 NCR2O95944 276 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 IGLV1-44P01699 117 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 NMBP08949 121 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 IGLC1P0CG04 106 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 PPP1CCP36873 323 aaKnown RBP3.97□□□□□ -1.77
DDB1-219ENST00000541513 AQP4P55087 323 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 HERVK_113P63121 156 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 KHDC3LQ587J8 217 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 MEIG1Q5JSS6 88 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 C10orf128Q5T292 105 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 Q5XG85 94 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 AMMECR1LQ6DCA0 310 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 SSX8Q7RTT4 187 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 OR2T27Q8NH04 317 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 ZNF431Q8TF32 576 aaPredicted RBP3.97□□□□□ -1.77
DDB1-219ENST00000541513 C15orf40Q8WUR7 153 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 Q96M85 177 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 AP1S3Q96PC3 154 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 PAXXQ9BUH6 204 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 TSSK6Q9BXA6 273 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 PLA2G12AQ9BZM1 189 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 ZNF331Q9NQX6 463 aaPredicted RBP3.97□□□□□ -1.77
DDB1-219ENST00000541513 ARFGEF3Q5TH69 2177 aa3.97□□□□□ -1.77
DDB1-219ENST00000541513 CHD3Q12873 2000 aaKnown RBP3.97□□□□□ -1.77
DDB1-219ENST00000541513 SETXQ7Z333 2677 aaKnown RBP3.96□□□□□ -1.78
DDB1-219ENST00000541513 RAI1Q7Z5J4 1906 aaPredicted RBP3.96□□□□□ -1.78
DDB1-219ENST00000541513 IGHV1-69-2A0A0G2JMI3 117 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 LOC107984640A0A0U1RRK4 108 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 B4DEV8 164 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 C9JQL5 133 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 ZNF670-ZNF695F2Z2N8 137 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 FNDC10F2Z333 226 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 IGLV2-23P01705 113 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 SPINK8P0C7L1 97 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 IGLC6P0CF74 106 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 BCL2P10415 239 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 CDKN2AP42771 156 aaKnown RBP3.96□□□□□ -1.78
DDB1-219ENST00000541513 LPAR6P43657 344 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 CEMP1Q6PRD7 247 aaPredicted RBP3.96□□□□□ -1.78
DDB1-219ENST00000541513 CAMK2N1Q7Z7J9 78 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 ZNF584Q8IVC4 421 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 ERMAPQ96PL5 475 aaPredicted RBP3.96□□□□□ -1.78
DDB1-219ENST00000541513 CIB3Q96Q77 187 aaPredicted RBP3.96□□□□□ -1.78
DDB1-219ENST00000541513 MRPL32Q9BYC8 188 aaKnown RBP3.96□□□□□ -1.78
DDB1-219ENST00000541513 TMEM191AQ9H0A3 160 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 BANF2Q9H503 90 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 CMC2Q9NRP2 79 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 ZNF581Q9P0T4 197 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 TAAR3PQ9P1P4 343 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 NAV2Q8IVL1 2488 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 POLQO75417 2590 aa3.96□□□□□ -1.78
DDB1-219ENST00000541513 MAP1AP78559 2803 aaPredicted RBP3.95□□□□□ -1.78
DDB1-219ENST00000541513 TRBV19A0A075B6N1 114 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 IGKV1D-43A0A0B4J1Z2 117 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 TRAV4A0A0B4J268 109 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 NDUFC2-KCTD14E9PQ53 114 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 CCDC179H3BU77 68 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 C19orf84I3L1E1 186 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 J3QQQ9 107 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 LMX1BO60663 402 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 DEDDO75618 318 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 LYZL6O75951 148 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 GABARAPO95166 117 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 P0DMU3 169 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 FAM231AP0DMU4 169 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 FAM231CP0DMU5 169 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 CRISP2P16562 243 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 CRYGSP22914 178 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 ATP5G3P48201 142 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 RBM11P57052 281 aaKnown RBP3.95□□□□□ -1.78
DDB1-219ENST00000541513 CATR1Q13166 79 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 LYRM7Q5U5X0 104 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 TMEM244Q5VVB8 128 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 C12orf73Q69YU5 71 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 Q6Q795 121 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 ALKAL2Q6UX46 152 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 UNQ9165/PRO28630Q6UXU0 137 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 TEX29Q8N6K0 151 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 OR4K13Q8NH42 304 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 GTSF1Q8WW33 167 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 NMNAT3Q96T66 252 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 VAMP8Q9BV40 100 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 WDR61Q9GZS3 305 aaKnown RBP3.95□□□□□ -1.78
DDB1-219ENST00000541513 ATG5Q9H1Y0 275 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 SCRT2Q9NQ03 307 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 MDFICQ9P1T7 246 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 MRPS16Q9Y3D3 137 aaKnown RBP3.95□□□□□ -1.78
DDB1-219ENST00000541513 USF3Q68DE3 2245 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 CCDC168Q8NDH2 2452 aa3.95□□□□□ -1.78
DDB1-219ENST00000541513 FBN2P35556 2912 aa3.94□□□□□ -1.78
DDB1-219ENST00000541513 NBPF19A0A087WUL8 3843 aa3.94□□□□□ -1.78
DDB1-219ENST00000541513 TRDV1A0A1B0GX56 115 aa3.94□□□□□ -1.78
DDB1-219ENST00000541513 M0R233 179 aa3.94□□□□□ -1.78
DDB1-219ENST00000541513 M0R381 172 aa3.94□□□□□ -1.78
DDB1-219ENST00000541513 UBL3O95164 117 aa3.94□□□□□ -1.78
DDB1-219ENST00000541513 LTAP01374 205 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms