RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PPBPP02775 128 aa8.07□□□□□ -1.12
CDC42SE1-207ENST00000540998 GCSHP23434 173 aa8.07□□□□□ -1.12
CDC42SE1-207ENST00000540998 C8orf31Q8N9H6 132 aa8.07□□□□□ -1.12
CDC42SE1-207ENST00000540998 AAMDCQ9H7C9 122 aa8.07□□□□□ -1.12
CDC42SE1-207ENST00000540998 KAAG1Q9UBP8 84 aa8.07□□□□□ -1.12
CDC42SE1-207ENST00000540998 SMAD5-AS1Q9Y6J3 95 aa8.07□□□□□ -1.12
CDC42SE1-207ENST00000540998 A1L4Q6 167 aa8.07□□□□□ -1.12
CDC42SE1-207ENST00000540998 J3KRW8 73 aa8.07□□□□□ -1.12
CDC42SE1-207ENST00000540998 SMAD7O15105 426 aaKnown RBP8.07□□□□□ -1.12
CDC42SE1-207ENST00000540998 FXYD2P54710 66 aa8.07□□□□□ -1.12
CDC42SE1-207ENST00000540998 GTSCR1Q86UQ5 136 aa8.07□□□□□ -1.12
CDC42SE1-207ENST00000540998 FER1L6-AS1Q8NA97 138 aa8.07□□□□□ -1.12
CDC42SE1-207ENST00000540998 AP1S3Q96PC3 154 aa8.07□□□□□ -1.12
CDC42SE1-207ENST00000540998 PRR25Q96S07 402 aa8.07□□□□□ -1.12
CDC42SE1-207ENST00000540998 WI2-2373I1.2A0A1W2PRP0 233 aa8.06□□□□□ -1.12
CDC42SE1-207ENST00000540998 HBDP02042 147 aa8.06□□□□□ -1.12
CDC42SE1-207ENST00000540998 CDSNQ15517 529 aa8.06□□□□□ -1.12
CDC42SE1-207ENST00000540998 ADAMTSL5Q6ZMM2 481 aa8.06□□□□□ -1.12
CDC42SE1-207ENST00000540998 LCNL1Q6ZST4 164 aa8.06□□□□□ -1.12
CDC42SE1-207ENST00000540998 ASCL5Q7RTU5 278 aa8.06□□□□□ -1.12
CDC42SE1-207ENST00000540998 BOD1L2Q8IYS8 172 aa8.06□□□□□ -1.12
CDC42SE1-207ENST00000540998 NBR2O15453 112 aa8.06□□□□□ -1.12
CDC42SE1-207ENST00000540998 TRGV3P03979 118 aa8.06□□□□□ -1.12
CDC42SE1-207ENST00000540998 LEPP41159 167 aa8.06□□□□□ -1.12
CDC42SE1-207ENST00000540998 PAX8Q06710 450 aa8.06□□□□□ -1.12
CDC42SE1-207ENST00000540998 UFSP1Q6NVU6 142 aa8.06□□□□□ -1.12
CDC42SE1-207ENST00000540998 C9orf118A6NHY6 69 aa8.05□□□□□ -1.12
CDC42SE1-207ENST00000540998 LY6LH3BQJ8 138 aa8.05□□□□□ -1.12
CDC42SE1-207ENST00000540998 IL17RELQ6ZVW7 336 aa8.05□□□□□ -1.12
CDC42SE1-207ENST00000540998 DEFB1P60022 68 aa8.05□□□□□ -1.12
CDC42SE1-207ENST00000540998 ZNF672Q499Z4 452 aaPredicted RBP8.05□□□□□ -1.12
CDC42SE1-207ENST00000540998 ZNF493Q6ZR52 646 aa8.05□□□□□ -1.12
CDC42SE1-207ENST00000540998 RNF185Q96GF1 192 aa8.05□□□□□ -1.12
CDC42SE1-207ENST00000540998 PRSS1P07477 247 aa8.04□□□□□ -1.12
CDC42SE1-207ENST00000540998 C11orf21Q9P2W6 132 aa8.04□□□□□ -1.12
CDC42SE1-207ENST00000540998 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.04□□□□□ -1.124e-10■■□□□ 12
CDC42SE1-207ENST00000540998 HIVEP3Q5T1R4 2406 aa8.04□□□□□ -1.12
CDC42SE1-207ENST00000540998 LGALS9BQ3B8N2 356 aa8.04□□□□□ -1.12
CDC42SE1-207ENST00000540998 LGALS9CQ6DKI2 356 aa8.04□□□□□ -1.12
CDC42SE1-207ENST00000540998 OR2K2Q8NGT1 345 aa8.04□□□□□ -1.12
CDC42SE1-207ENST00000540998 CFHR4Q92496 578 aa8.04□□□□□ -1.12
CDC42SE1-207ENST00000540998 FOXC2Q99958 501 aa8.04□□□□□ -1.12
CDC42SE1-207ENST00000540998 CSTL1Q9H114 145 aa8.04□□□□□ -1.12
CDC42SE1-207ENST00000540998 C21orf62Q9NYP8 219 aa8.04□□□□□ -1.12
CDC42SE1-207ENST00000540998 SPCS1Q9Y6A9 102 aa8.04□□□□□ -1.12
CDC42SE1-207ENST00000540998 SEC11AP67812 179 aa8.04□□□□□ -1.12
CDC42SE1-207ENST00000540998 U3KQK5 164 aa8.04□□□□□ -1.12
CDC42SE1-207ENST00000540998 KLK15Q9H2R5 256 aa8.03□□□□□ -1.12
CDC42SE1-207ENST00000540998 SORL1Q92673 2214 aa8.03□□□□□ -1.12
CDC42SE1-207ENST00000540998 IGLV11-55A0A075B6I3 123 aa8.03□□□□□ -1.12
CDC42SE1-207ENST00000540998 K7EP34 96 aa8.03□□□□□ -1.12
CDC42SE1-207ENST00000540998 K7ERU9 68 aa8.03□□□□□ -1.12
CDC42SE1-207ENST00000540998 CTSGP08311 255 aa8.03□□□□□ -1.12
CDC42SE1-207ENST00000540998 EFNA4P52798 201 aa8.03□□□□□ -1.12
CDC42SE1-207ENST00000540998 ECSCRQ19T08 205 aa8.03□□□□□ -1.12
CDC42SE1-207ENST00000540998 C5orf64Q2M2E5 130 aa8.03□□□□□ -1.12
CDC42SE1-207ENST00000540998 TMEM158Q8WZ71 300 aa8.03□□□□□ -1.12
CDC42SE1-207ENST00000540998 TMEM160Q9NX00 188 aa8.03□□□□□ -1.12
CDC42SE1-207ENST00000540998 LINC01548A6NM66 108 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 H3BRM9 83 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 CD3EP07766 207 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 MFAP4P55083 255 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 RPL24P83731 157 aaKnown RBP8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 GATD1Q8NB37 220 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 OR1N2Q8NGR9 330 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 ARPC1AQ92747 370 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 NHP2Q9NX24 153 aaKnown RBP8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 DPM3Q9P2X0 92 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 UFC1Q9Y3C8 167 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 A6NDN8 102 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 TNFRSF6BO95407 300 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 HSD52Q0P140 79 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 ODF1Q14990 250 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 MAPKAPK5-AS1Q8N8E1 139 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 LINC00527Q9UJ94 153 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 A0A1W2PPM0 123 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 IGF1P05019 195 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 ZNF562Q6V9R5 426 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 HHLA3Q9XRX5 114 aa8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 UTP20O75691 2785 aaKnown RBP8.02□□□□□ -1.13
CDC42SE1-207ENST00000540998 CREBBPQ92793 2442 aa8.01□□□□□ -1.13
CDC42SE1-207ENST00000540998 CENPEQ02224 2701 aa8.01□□□□□ -1.13
CDC42SE1-207ENST00000540998 TRAV40A0A0B4J280 105 aa8.01□□□□□ -1.13
CDC42SE1-207ENST00000540998 TRBV6-1A0A0K0K1D8 114 aa8.01□□□□□ -1.13
CDC42SE1-207ENST00000540998 VSTM5A8MXK1 200 aa8.01□□□□□ -1.13
CDC42SE1-207ENST00000540998 IGLC6P0CF74 106 aa8.01□□□□□ -1.13
CDC42SE1-207ENST00000540998 ZC2HC1BQ5TFG8 222 aa8.01□□□□□ -1.13
CDC42SE1-207ENST00000540998 SMIM15Q7Z3B0 74 aa8.01□□□□□ -1.13
CDC42SE1-207ENST00000540998 TNFRSF14Q92956 283 aa8.01□□□□□ -1.13
CDC42SE1-207ENST00000540998 JKAMPQ9P055 326 aa8.01□□□□□ -1.13
CDC42SE1-207ENST00000540998 DOPEY2Q9Y3R5 2298 aa8.01□□□□□ -1.13
CDC42SE1-207ENST00000540998 G3V318 75 aa8.01□□□□□ -1.13
CDC42SE1-207ENST00000540998 Q6AWC8 147 aa8.01□□□□□ -1.13
CDC42SE1-207ENST00000540998 AMTNQ6UX39 209 aa8.01□□□□□ -1.13
CDC42SE1-207ENST00000540998 DTX2Q86UW9 622 aa8.01□□□□□ -1.13
CDC42SE1-207ENST00000540998 CSPG4Q6UVK1 2322 aa8.01□□□□□ -1.13
CDC42SE1-207ENST00000540998 IGKV3D-20A0A0C4DH25 116 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 TEX48A0A1B0GUV7 120 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 TMEM8BA6NDV4 472 aa8□□□□□ -1.13
CDC42SE1-207ENST00000540998 PAX2Q02962 417 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms