RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 GOLT1BQ9Y3E0 138 aa11.28□□□□□ -0.6
DDB1-218ENST00000540784 CDKN1BP46527 198 aa11.27□□□□□ -0.61
DDB1-218ENST00000540784 ALKAL2Q6UX46 152 aa11.27□□□□□ -0.61
DDB1-218ENST00000540784 C5orf17Q8NAS9 161 aa11.27□□□□□ -0.61
DDB1-218ENST00000540784 EPDR1Q9UM22 224 aa11.27□□□□□ -0.61
DDB1-218ENST00000540784 YTHDF2Q9Y5A9 579 aaKnown RBP11.27□□□□□ -0.61
DDB1-218ENST00000540784 COL7A1Q02388 2944 aa11.27□□□□□ -0.61
DDB1-218ENST00000540784 TRAV12-2A0A075B6T6 113 aa11.26□□□□□ -0.61
DDB1-218ENST00000540784 IGHV3OR16-12A0A075B7B8 117 aa11.26□□□□□ -0.61
DDB1-218ENST00000540784 TRAV1-1A0A0B4J248 108 aa11.26□□□□□ -0.61
DDB1-218ENST00000540784 FAM74A7A6NL05 159 aa11.26□□□□□ -0.61
DDB1-218ENST00000540784 ZNF705EA8MWA4 302 aaPredicted RBP11.26□□□□□ -0.61
DDB1-218ENST00000540784 IFNA7P01567 189 aa11.26□□□□□ -0.61
DDB1-218ENST00000540784 HBE1P02100 147 aa11.26□□□□□ -0.61
DDB1-218ENST00000540784 PPT1P50897 306 aa11.26□□□□□ -0.61
DDB1-218ENST00000540784 ZNF138P52744 262 aa11.26□□□□□ -0.61
DDB1-218ENST00000540784 GNG5P63218 68 aa11.26□□□□□ -0.61
DDB1-218ENST00000540784 GOLT1AQ6ZVE7 132 aa11.26□□□□□ -0.61
DDB1-218ENST00000540784 ZNF492Q9P255 531 aa11.26□□□□□ -0.61
DDB1-218ENST00000540784 HUWE1Q7Z6Z7 4374 aaKnown RBP11.26□□□□□ -0.61
DDB1-218ENST00000540784 SERTM2A0A1B0GWG4 89 aa11.25□□□□□ -0.61
DDB1-218ENST00000540784 GGTLC3B5MD39 225 aa11.25□□□□□ -0.61
DDB1-218ENST00000540784 K7EQM0 130 aa11.25□□□□□ -0.61
DDB1-218ENST00000540784 CRXO43186 299 aaPredicted RBP11.25□□□□□ -0.61
DDB1-218ENST00000540784 INSP01308 110 aa11.25□□□□□ -0.61
DDB1-218ENST00000540784 CST9LP1Q5W188 147 aa11.25□□□□□ -0.61
DDB1-218ENST00000540784 C1orf158Q8N1D5 194 aa11.25□□□□□ -0.61
DDB1-218ENST00000540784 TMEM208Q9BTX3 173 aa11.25□□□□□ -0.61
DDB1-218ENST00000540784 J3KRW8 73 aa11.24□□□□□ -0.61
DDB1-218ENST00000540784 PAGE4O60829 102 aa11.24□□□□□ -0.61
DDB1-218ENST00000540784 TCRAP04437 139 aa11.24□□□□□ -0.61
DDB1-218ENST00000540784 CCL20P78556 96 aa11.24□□□□□ -0.61
DDB1-218ENST00000540784 ZNF705AQ6ZN79 300 aaPredicted RBP11.24□□□□□ -0.61
DDB1-218ENST00000540784 FAM19A4Q96LR4 140 aa11.24□□□□□ -0.61
DDB1-218ENST00000540784 SMIM9A6NGZ8 99 aa11.23□□□□□ -0.61
DDB1-218ENST00000540784 GPX1P07203 203 aa11.23□□□□□ -0.61
DDB1-218ENST00000540784 NMBP08949 121 aa11.23□□□□□ -0.61
DDB1-218ENST00000540784 MIFP14174 115 aa11.23□□□□□ -0.61
DDB1-218ENST00000540784 BLOC1S1P78537 153 aa11.23□□□□□ -0.61
DDB1-218ENST00000540784 LINC01587Q99440 93 aa11.23□□□□□ -0.61
DDB1-218ENST00000540784 ARL2-SNX15V9GYD0 113 aa11.23□□□□□ -0.61
DDB1-218ENST00000540784 X6R8D5 127 aa11.23□□□□□ -0.61
DDB1-218ENST00000540784 TRBV7-9A0A0J9YWB2 115 aa11.22□□□□□ -0.61
DDB1-218ENST00000540784 A0A0J9YWU9 116 aa11.22□□□□□ -0.61
DDB1-218ENST00000540784 F6UZH7 168 aa11.22□□□□□ -0.61
DDB1-218ENST00000540784 CRISP2P16562 243 aa11.22□□□□□ -0.61
DDB1-218ENST00000540784 RNASE4P34096 147 aaKnown RBP11.22□□□□□ -0.61
DDB1-218ENST00000540784 KIR3DS1Q14943 382 aa11.22□□□□□ -0.61
DDB1-218ENST00000540784 TMEM256Q8N2U0 113 aa11.22□□□□□ -0.61
DDB1-218ENST00000540784 CYB561D1Q8N8Q1 229 aa11.22□□□□□ -0.61
DDB1-218ENST00000540784 Q8TAT8 98 aa11.22□□□□□ -0.61
DDB1-218ENST00000540784 HIST1H2BAQ96A08 127 aa11.22□□□□□ -0.61
DDB1-218ENST00000540784 WWC2-AS2Q96NR7 200 aa11.22□□□□□ -0.61
DDB1-218ENST00000540784 NEU1Q99519 415 aa11.22□□□□□ -0.61
DDB1-218ENST00000540784 C20orf144Q9BQM9 153 aa11.22□□□□□ -0.61
DDB1-218ENST00000540784 ATG101Q9BSB4 218 aa11.22□□□□□ -0.61
DDB1-218ENST00000540784 EDA2RQ9HAV5 297 aa11.22□□□□□ -0.61
DDB1-218ENST00000540784 GNG13Q9P2W3 67 aa11.22□□□□□ -0.61
DDB1-218ENST00000540784 LENEPQ9Y5L5 61 aa11.22□□□□□ -0.61
DDB1-218ENST00000540784 TRAV12-3A0A0B4J271 114 aa11.21□□□□□ -0.61
DDB1-218ENST00000540784 FBLL1A6NHQ2 334 aaKnown RBP11.21□□□□□ -0.61
DDB1-218ENST00000540784 GFI1BQ5VTD9 330 aa11.21□□□□□ -0.61
DDB1-218ENST00000540784 CCDC28AQ8IWP9 274 aa11.21□□□□□ -0.61
DDB1-218ENST00000540784 SGK494Q96LW2 274 aa11.21□□□□□ -0.61
DDB1-218ENST00000540784 TCEAL7Q9BRU2 100 aa11.21□□□□□ -0.61
DDB1-218ENST00000540784 MANBALQ9NQG1 85 aa11.21□□□□□ -0.61
DDB1-218ENST00000540784 TRAV8-1A0A0A6YYK1 113 aa11.2□□□□□ -0.62
DDB1-218ENST00000540784 IGHV4-28A0A0C4DH34 117 aa11.2□□□□□ -0.62
DDB1-218ENST00000540784 C7orf71A4D174 169 aa11.2□□□□□ -0.62
DDB1-218ENST00000540784 KLLNB2CW77 178 aa11.2□□□□□ -0.62
DDB1-218ENST00000540784 PEX7O00628 323 aa11.2□□□□□ -0.62
DDB1-218ENST00000540784 DEFB4AO15263 64 aa11.2□□□□□ -0.62
DDB1-218ENST00000540784 ATP5G3P48201 142 aa11.2□□□□□ -0.62
DDB1-218ENST00000540784 RRN3P1Q2M238 152 aa11.2□□□□□ -0.62
DDB1-218ENST00000540784 ZFAND2AQ8N6M9 145 aa11.2□□□□□ -0.62
DDB1-218ENST00000540784 Q8NAQ8 132 aa11.2□□□□□ -0.62
DDB1-218ENST00000540784 NIPSNAP3BQ9BS92 247 aa11.2□□□□□ -0.62
DDB1-218ENST00000540784 PSG8Q9UQ74 426 aa11.2□□□□□ -0.62
DDB1-218ENST00000540784 ZNF705GA8MUZ8 300 aaPredicted RBP11.19□□□□□ -0.62
DDB1-218ENST00000540784 H7BYZ3 331 aa11.19□□□□□ -0.62
DDB1-218ENST00000540784 IFNA1P01562 189 aa11.19□□□□□ -0.62
DDB1-218ENST00000540784 RBMY1A1P0DJD3 496 aaKnown RBP11.19□□□□□ -0.62
DDB1-218ENST00000540784 RBMY1CP0DJD4 496 aa11.19□□□□□ -0.62
DDB1-218ENST00000540784 HTN1P15515 57 aa11.19□□□□□ -0.62
DDB1-218ENST00000540784 TAS2R60P59551 318 aa11.19□□□□□ -0.62
DDB1-218ENST00000540784 FLI1Q01543 452 aaPredicted RBP11.19□□□□□ -0.62
DDB1-218ENST00000540784 PMS2P11Q13670 270 aa11.19□□□□□ -0.62
DDB1-218ENST00000540784 RBMY1FQ15415 496 aaKnown RBP11.19□□□□□ -0.62
DDB1-218ENST00000540784 TEX261Q6UWH6 196 aa11.19□□□□□ -0.62
DDB1-218ENST00000540784 PRNTQ86SH4 94 aa11.19□□□□□ -0.62
DDB1-218ENST00000540784 TMEM75Q8N9X5 138 aa11.19□□□□□ -0.62
DDB1-218ENST00000540784 LINC00479Q96M42 142 aa11.19□□□□□ -0.62
DDB1-218ENST00000540784 NDFIP1Q9BT67 221 aa11.19□□□□□ -0.62
DDB1-218ENST00000540784 TREM1Q9NP99 234 aa11.19□□□□□ -0.62
DDB1-218ENST00000540784 TMA7Q9Y2S6 64 aaKnown RBP11.19□□□□□ -0.62
DDB1-218ENST00000540784 TENM3Q9P273 2699 aa11.18□□□□□ -0.62
DDB1-218ENST00000540784 TRAV34A0A0B4J273 112 aa11.18□□□□□ -0.62
DDB1-218ENST00000540784 C11orf94C9JXX5 98 aa11.18□□□□□ -0.62
DDB1-218ENST00000540784 ZNF324O75467 553 aaPredicted RBP11.18□□□□□ -0.62
DDB1-218ENST00000540784 BTN1A1Q13410 526 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms