RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CACNA1HO95180 2353 aa10.28□□□□□ -0.76
UBE3B-209ENST00000539584 BUB3O43684 328 aa10.28□□□□□ -0.76
UBE3B-209ENST00000539584 IGKCP01834 107 aa10.28□□□□□ -0.76
UBE3B-209ENST00000539584 FABP2P12104 132 aa10.28□□□□□ -0.76
UBE3B-209ENST00000539584 TMEM11P17152 192 aa10.28□□□□□ -0.76
UBE3B-209ENST00000539584 Q8TAT8 98 aa10.28□□□□□ -0.76
UBE3B-209ENST00000539584 LINC01560Q8TB33 94 aa10.28□□□□□ -0.76
UBE3B-209ENST00000539584 IGHV7-81A0A0B4J1V7 117 aa10.27□□□□□ -0.77
UBE3B-209ENST00000539584 SMKR1H3BMG3 65 aa10.27□□□□□ -0.77
UBE3B-209ENST00000539584 FOXE3Q13461 319 aa10.27□□□□□ -0.77
UBE3B-209ENST00000539584 ZNF502Q8TBZ5 544 aa10.27□□□□□ -0.77
UBE3B-209ENST00000539584 ATP6V0BQ99437 205 aa10.27□□□□□ -0.77
UBE3B-209ENST00000539584 DKK2Q9UBU2 259 aa10.27□□□□□ -0.77
UBE3B-209ENST00000539584 ZFHX4Q86UP3 3567 aa10.27□□□□□ -0.77
UBE3B-209ENST00000539584 IGHV4-4A0A075B6R2 117 aa10.26□□□□□ -0.77
UBE3B-209ENST00000539584 DPM2O94777 84 aa10.26□□□□□ -0.77
UBE3B-209ENST00000539584 PRSS1P07477 247 aa10.26□□□□□ -0.77
UBE3B-209ENST00000539584 NEGR1Q7Z3B1 354 aa10.26□□□□□ -0.77
UBE3B-209ENST00000539584 PCP2Q8IVA1 136 aa10.26□□□□□ -0.77
UBE3B-209ENST00000539584 ABCA1O95477 2261 aa10.26□□□□□ -0.77
UBE3B-209ENST00000539584 G3V4G9 280 aa10.26□□□□□ -0.77
UBE3B-209ENST00000539584 TAL2Q16559 108 aa10.26□□□□□ -0.77
UBE3B-209ENST00000539584 IL17RELQ6ZVW7 336 aa10.26□□□□□ -0.77
UBE3B-209ENST00000539584 DTX2Q86UW9 622 aa10.26□□□□□ -0.77
UBE3B-209ENST00000539584 DYNAPQ8N1N2 210 aa10.26□□□□□ -0.77
UBE3B-209ENST00000539584 ZFAND3Q9H8U3 227 aa10.26□□□□□ -0.77
UBE3B-209ENST00000539584 SPCS1Q9Y6A9 102 aa10.26□□□□□ -0.77
UBE3B-209ENST00000539584 ROS1P08922 2347 aa10.25□□□□□ -0.77
UBE3B-209ENST00000539584 KLRD1Q13241 179 aa10.25□□□□□ -0.77
UBE3B-209ENST00000539584 MYOZ3Q8TDC0 251 aa10.25□□□□□ -0.77
UBE3B-209ENST00000539584 JMJD8Q96S16 334 aa10.25□□□□□ -0.77
UBE3B-209ENST00000539584 TM2D2Q9BX73 214 aa10.25□□□□□ -0.77
UBE3B-209ENST00000539584 LENEPQ9Y5L5 61 aa10.25□□□□□ -0.77
UBE3B-209ENST00000539584 PKDREJQ9NTG1 2253 aa10.25□□□□□ -0.77
UBE3B-209ENST00000539584 RP1L1Q8IWN7 2480 aaPredicted RBP10.25□□□□□ -0.77
UBE3B-209ENST00000539584 IGLV2-18A0A075B6J9 118 aa10.24□□□□□ -0.77
UBE3B-209ENST00000539584 FXYD7P58549 80 aa10.24□□□□□ -0.77
UBE3B-209ENST00000539584 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.24□□□□□ -0.77
UBE3B-209ENST00000539584 Q8N9W7 124 aa10.24□□□□□ -0.77
UBE3B-209ENST00000539584 MEGF9Q9H1U4 602 aa10.24□□□□□ -0.77
UBE3B-209ENST00000539584 K7EMI3 77 aa10.24□□□□□ -0.77
UBE3B-209ENST00000539584 LAGE3Q14657 143 aa10.24□□□□□ -0.77
UBE3B-209ENST00000539584 TMEM78Q5T7P6 136 aa10.24□□□□□ -0.77
UBE3B-209ENST00000539584 SAMD5Q5TGI4 173 aa10.24□□□□□ -0.77
UBE3B-209ENST00000539584 C18orf15Q96N68 181 aa10.24□□□□□ -0.77
UBE3B-209ENST00000539584 MSRB1Q9NZV6 116 aa10.24□□□□□ -0.77
UBE3B-209ENST00000539584 MSRB2Q9Y3D2 182 aa10.24□□□□□ -0.77
UBE3B-209ENST00000539584 TRBV7-1A0A0A6YYK4 115 aa10.23□□□□□ -0.77
UBE3B-209ENST00000539584 K7ENP7 123 aa10.23□□□□□ -0.77
UBE3B-209ENST00000539584 C15orf32Q32M92 178 aa10.23□□□□□ -0.77
UBE3B-209ENST00000539584 PRR30Q53SZ7 412 aaPredicted RBP10.23□□□□□ -0.77
UBE3B-209ENST00000539584 C11orf71Q6IPW1 123 aa10.23□□□□□ -0.77
UBE3B-209ENST00000539584 C9orf47Q6ZRZ4 202 aa10.23□□□□□ -0.77
UBE3B-209ENST00000539584 TMEM158Q8WZ71 300 aa10.23□□□□□ -0.77
UBE3B-209ENST00000539584 CHAC1Q9BUX1 264 aa10.23□□□□□ -0.77
UBE3B-209ENST00000539584 IGKV3D-20A0A0C4DH25 116 aa10.23□□□□□ -0.77
UBE3B-209ENST00000539584 IGHV3-23P01764 117 aa10.23□□□□□ -0.77
UBE3B-209ENST00000539584 PLNP26678 52 aa10.23□□□□□ -0.77
UBE3B-209ENST00000539584 HLA-DMBP28068 263 aa10.23□□□□□ -0.77
UBE3B-209ENST00000539584 MRAP2Q96G30 205 aa10.23□□□□□ -0.77
UBE3B-209ENST00000539584 TRBV25-1A0A075B6N4 114 aa10.22□□□□□ -0.77
UBE3B-209ENST00000539584 CLEC3BP05452 202 aa10.22□□□□□ -0.77
UBE3B-209ENST00000539584 EEF1AKMT3Q96AZ1 226 aa10.22□□□□□ -0.77
UBE3B-209ENST00000539584 METTL26Q96S19 204 aa10.22□□□□□ -0.77
UBE3B-209ENST00000539584 FOXC2Q99958 501 aa10.22□□□□□ -0.77
UBE3B-209ENST00000539584 EP300Q09472 2414 aaPredicted RBP10.21□□□□□ -0.77
UBE3B-209ENST00000539584 TRAV12-1A0A0B4J245 112 aa10.21□□□□□ -0.77
UBE3B-209ENST00000539584 FAM90A27PA6NNH2 459 aa10.21□□□□□ -0.77
UBE3B-209ENST00000539584 LINC01619G3V211 115 aa10.21□□□□□ -0.77
UBE3B-209ENST00000539584 GCSHP23434 173 aa10.21□□□□□ -0.77
UBE3B-209ENST00000539584 UBE2E1P51965 193 aa10.21□□□□□ -0.77
UBE3B-209ENST00000539584 ERCC8Q13216 396 aa10.21□□□□□ -0.77
UBE3B-209ENST00000539584 ZC2HC1BQ5TFG8 222 aa10.21□□□□□ -0.77
UBE3B-209ENST00000539584 CEND1Q8N111 149 aa10.21□□□□□ -0.77
UBE3B-209ENST00000539584 AGPAT4-IT1Q9H0P7 198 aa10.21□□□□□ -0.77
UBE3B-209ENST00000539584 A0A087WX48 190 aa10.21□□□□□ -0.78
UBE3B-209ENST00000539584 A0A1W2PRD5 423 aa10.21□□□□□ -0.78
UBE3B-209ENST00000539584 A0A1W2PRF3 423 aa10.21□□□□□ -0.78
UBE3B-209ENST00000539584 A0A1W2PRM7 423 aa10.21□□□□□ -0.78
UBE3B-209ENST00000539584 TMEM8BA6NDV4 472 aa10.21□□□□□ -0.78
UBE3B-209ENST00000539584 PRAC2D3DTV9 90 aa10.21□□□□□ -0.78
UBE3B-209ENST00000539584 PRB4P10163 310 aaPredicted RBP10.21□□□□□ -0.78
UBE3B-209ENST00000539584 IGFL4Q6B9Z1 124 aa10.21□□□□□ -0.78
UBE3B-209ENST00000539584 NRACQ8N912 160 aa10.21□□□□□ -0.78
UBE3B-209ENST00000539584 RAB37Q96AX2 223 aa10.21□□□□□ -0.78
UBE3B-209ENST00000539584 CNOT1A5YKK6 2376 aaKnown RBP10.2□□□□□ -0.78
UBE3B-209ENST00000539584 IGKV2D-26A0A0A0MRZ7 120 aa10.2□□□□□ -0.78
UBE3B-209ENST00000539584 IGHV7-4-1A0A0J9YVY3 117 aa10.2□□□□□ -0.78
UBE3B-209ENST00000539584 SLC25A16P16260 332 aa10.2□□□□□ -0.78
UBE3B-209ENST00000539584 WFDC3Q8IUB2 231 aa10.2□□□□□ -0.78
UBE3B-209ENST00000539584 SIRPDQ9H106 197 aa10.2□□□□□ -0.78
UBE3B-209ENST00000539584 U3KQE9 123 aa10.2□□□□□ -0.78
UBE3B-209ENST00000539584 CFAP47Q6ZTR5 3102 aa10.2□□□□□ -0.78
UBE3B-209ENST00000539584 CLPSL1A2RUU4 121 aa10.19□□□□□ -0.78
UBE3B-209ENST00000539584 TCF15Q12870 199 aa10.19□□□□□ -0.78
UBE3B-209ENST00000539584 ORMDL2Q53FV1 153 aa10.19□□□□□ -0.78
UBE3B-209ENST00000539584 SAP30O75446 220 aa10.19□□□□□ -0.78
UBE3B-209ENST00000539584 FXYD2P54710 66 aa10.19□□□□□ -0.78
UBE3B-209ENST00000539584 PHLDA1Q8WV24 401 aaPredicted RBP10.19□□□□□ -0.78
UBE3B-209ENST00000539584 F8W1H4 67 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms