RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 GAGE12GP0CL81 117 aa13.35□□□□□ -0.27
TNFRSF1A-212ENST00000539372 GAGE12IP0CL82 117 aa13.35□□□□□ -0.27
TNFRSF1A-212ENST00000539372 OR5I1Q13606 314 aa13.35□□□□□ -0.27
TNFRSF1A-212ENST00000539372 RNF141Q8WVD5 230 aa13.35□□□□□ -0.27
TNFRSF1A-212ENST00000539372 LINC00477Q96M19 166 aa13.35□□□□□ -0.27
TNFRSF1A-212ENST00000539372 ATP5SQ99766 215 aa13.35□□□□□ -0.27
TNFRSF1A-212ENST00000539372 OR51M1Q9H341 326 aa13.35□□□□□ -0.27
TNFRSF1A-212ENST00000539372 KCNIP2Q9NS61 270 aa13.35□□□□□ -0.27
TNFRSF1A-212ENST00000539372 MPC2O95563 127 aa13.34□□□□□ -0.27
TNFRSF1A-212ENST00000539372 NBEAP1P0C6P0 100 aa13.34□□□□□ -0.27
TNFRSF1A-212ENST00000539372 RNASE4P34096 147 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-212ENST00000539372 CD300CQ08708 224 aa13.34□□□□□ -0.27
TNFRSF1A-212ENST00000539372 BTN1A1Q13410 526 aa13.34□□□□□ -0.27
TNFRSF1A-212ENST00000539372 LINC00612Q8N6U2 182 aa13.34□□□□□ -0.27
TNFRSF1A-212ENST00000539372 FAM19A4Q96LR4 140 aa13.34□□□□□ -0.27
TNFRSF1A-212ENST00000539372 PYGO2Q9BRQ0 406 aa13.34□□□□□ -0.27
TNFRSF1A-212ENST00000539372 PAXXQ9BUH6 204 aa13.34□□□□□ -0.27
TNFRSF1A-212ENST00000539372 MRPL32Q9BYC8 188 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1A-212ENST00000539372 SMIM3Q9BZL3 60 aa13.34□□□□□ -0.27
TNFRSF1A-212ENST00000539372 FUT9Q9Y231 359 aa13.34□□□□□ -0.27
TNFRSF1A-212ENST00000539372 HSPB11Q9Y547 144 aa13.34□□□□□ -0.27
TNFRSF1A-212ENST00000539372 KLLNB2CW77 178 aa13.33□□□□□ -0.28
TNFRSF1A-212ENST00000539372 C17orf112F2Z3M2 114 aa13.33□□□□□ -0.28
TNFRSF1A-212ENST00000539372 FXYD5Q96DB9 178 aa13.33□□□□□ -0.28
TNFRSF1A-212ENST00000539372 VGLL1Q99990 258 aa13.33□□□□□ -0.28
TNFRSF1A-212ENST00000539372 PET100P0DJ07 73 aa13.32□□□□□ -0.28
TNFRSF1A-212ENST00000539372 FAM3BP58499 235 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-212ENST00000539372 C9orf47Q6ZRZ4 202 aa13.32□□□□□ -0.28
TNFRSF1A-212ENST00000539372 PHYHIPLQ96FC7 376 aa13.32□□□□□ -0.28
TNFRSF1A-212ENST00000539372 GSN-AS1Q9NRJ2 163 aa13.32□□□□□ -0.28
TNFRSF1A-212ENST00000539372 MBD2Q9UBB5 411 aa13.32□□□□□ -0.28
TNFRSF1A-212ENST00000539372 DNAH17Q9UFH2 4485 aa13.32□□□□□ -0.28
TNFRSF1A-212ENST00000539372 TRAV26-1A0A087WT03 109 aa13.31□□□□□ -0.28
TNFRSF1A-212ENST00000539372 A0A0J9YY99 117 aa13.31□□□□□ -0.28
TNFRSF1A-212ENST00000539372 OR7C2O60412 319 aa13.31□□□□□ -0.28
TNFRSF1A-212ENST00000539372 ZNF324O75467 553 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF1A-212ENST00000539372 GPX1P07203 203 aa13.31□□□□□ -0.28
TNFRSF1A-212ENST00000539372 HOXA5P20719 270 aa13.31□□□□□ -0.28
TNFRSF1A-212ENST00000539372 RPL12P30050 165 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-212ENST00000539372 CCL18P55774 89 aa13.31□□□□□ -0.28
TNFRSF1A-212ENST00000539372 FFAR4Q5NUL3 377 aa13.31□□□□□ -0.28
TNFRSF1A-212ENST00000539372 C1orf134Q5TEV5 83 aa13.31□□□□□ -0.28
TNFRSF1A-212ENST00000539372 Q6ZTI0 123 aa13.31□□□□□ -0.28
TNFRSF1A-212ENST00000539372 LINC00588Q9Y4M8 146 aa13.31□□□□□ -0.28
TNFRSF1A-212ENST00000539372 CRISP2P16562 243 aa13.3□□□□□ -0.28
TNFRSF1A-212ENST00000539372 M6PRP20645 277 aa13.3□□□□□ -0.28
TNFRSF1A-212ENST00000539372 DAZ2Q13117 558 aaKnown RBP13.3□□□□□ -0.28
TNFRSF1A-212ENST00000539372 TMEM78Q5T7P6 136 aa13.3□□□□□ -0.28
TNFRSF1A-212ENST00000539372 PRR9Q5T870 116 aa13.3□□□□□ -0.28
TNFRSF1A-212ENST00000539372 ZNRF2Q8NHG8 242 aa13.3□□□□□ -0.28
TNFRSF1A-212ENST00000539372 SCGB1C1Q8TD33 95 aa13.3□□□□□ -0.28
TNFRSF1A-212ENST00000539372 GNPNAT1Q96EK6 184 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-212ENST00000539372 ZNF503Q96F45 646 aa13.3□□□□□ -0.28
TNFRSF1A-212ENST00000539372 TMPRSS5Q9H3S3 457 aa13.3□□□□□ -0.28
TNFRSF1A-212ENST00000539372 EIF3GO75821 320 aaKnown RBP eCLIP13.29□□□□□ -0.28
TNFRSF1A-212ENST00000539372 IFNA5P01569 189 aa13.29□□□□□ -0.28
TNFRSF1A-212ENST00000539372 RANP62826 216 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-212ENST00000539372 SOHLH1Q5JUK2 328 aa13.29□□□□□ -0.28
TNFRSF1A-212ENST00000539372 Q6ZQT7 251 aa13.29□□□□□ -0.28
TNFRSF1A-212ENST00000539372 ZFAND2AQ8N6M9 145 aa13.29□□□□□ -0.28
TNFRSF1A-212ENST00000539372 C11orf72Q8NBR9 251 aa13.29□□□□□ -0.28
TNFRSF1A-212ENST00000539372 ZNF680Q8NEM1 530 aa13.29□□□□□ -0.28
TNFRSF1A-212ENST00000539372 Q8TAT8 98 aa13.29□□□□□ -0.28
TNFRSF1A-212ENST00000539372 WFDC1Q9HC57 220 aa13.29□□□□□ -0.28
TNFRSF1A-212ENST00000539372 UBE2L3P68036 154 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-212ENST00000539372 SSX7Q7RTT5 188 aa13.28□□□□□ -0.28
TNFRSF1A-212ENST00000539372 EIF4E3Q8N5X7 224 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-212ENST00000539372 LINC00467Q9BRT7 94 aa13.28□□□□□ -0.28
TNFRSF1A-212ENST00000539372 ZNF492Q9P255 531 aa13.28□□□□□ -0.28
TNFRSF1A-212ENST00000539372 TP53TG3Q9ULZ0 132 aa13.28□□□□□ -0.28
TNFRSF1A-212ENST00000539372 TRGV2A0A075B6R0 118 aa13.27□□□□□ -0.29
TNFRSF1A-212ENST00000539372 TRGV1A0A0A0MS02 117 aa13.27□□□□□ -0.29
TNFRSF1A-212ENST00000539372 NBDYA0A0U1RRE5 68 aa13.27□□□□□ -0.29
TNFRSF1A-212ENST00000539372 RGS13O14921 159 aa13.27□□□□□ -0.29
TNFRSF1A-212ENST00000539372 RXFP4Q8TDU9 374 aa13.27□□□□□ -0.29
TNFRSF1A-212ENST00000539372 Q9H3A6 140 aa13.27□□□□□ -0.29
TNFRSF1A-212ENST00000539372 KLF12Q9Y4X4 402 aa13.27□□□□□ -0.29
TNFRSF1A-212ENST00000539372 PKHD1P08F94 4074 aa13.27□□□□□ -0.29
TNFRSF1A-212ENST00000539372 NMBP08949 121 aa13.26□□□□□ -0.29
TNFRSF1A-212ENST00000539372 CSN1S1P47710 185 aa13.26□□□□□ -0.29
TNFRSF1A-212ENST00000539372 ZNF138P52744 262 aa13.26□□□□□ -0.29
TNFRSF1A-212ENST00000539372 ANXA2RQ3ZCQ2 193 aa13.26□□□□□ -0.29
TNFRSF1A-212ENST00000539372 KHDC3LQ587J8 217 aa13.26□□□□□ -0.29
TNFRSF1A-212ENST00000539372 ALG5Q9Y673 324 aa13.26□□□□□ -0.29
TNFRSF1A-212ENST00000539372 TAS2R45P59539 299 aa13.25□□□□□ -0.29
TNFRSF1A-212ENST00000539372 IGHV1OR15-1A0A075B7D0 117 aa13.24□□□□□ -0.29
TNFRSF1A-212ENST00000539372 TCL1AP56279 114 aa13.24□□□□□ -0.29
TNFRSF1A-212ENST00000539372 LYPD1Q8N2G4 141 aa13.24□□□□□ -0.29
TNFRSF1A-212ENST00000539372 HYLS1Q96M11 299 aa13.24□□□□□ -0.29
TNFRSF1A-212ENST00000539372 HERC2O95714 4834 aa13.24□□□□□ -0.29
TNFRSF1A-212ENST00000539372 SPINK4O60575 86 aa13.23□□□□□ -0.29
TNFRSF1A-212ENST00000539372 ARPC5LQ9BPX5 153 aa13.23□□□□□ -0.29
TNFRSF1A-212ENST00000539372 PKD1P98161 4303 aa13.22□□□□□ -0.29
TNFRSF1A-212ENST00000539372 RBAKDNA6NC62 111 aa13.22□□□□□ -0.29
TNFRSF1A-212ENST00000539372 DIRC3C9JPN6 131 aa13.22□□□□□ -0.29
TNFRSF1A-212ENST00000539372 RAB2AP61019 212 aa13.22□□□□□ -0.29
TNFRSF1A-212ENST00000539372 ESRGQ1W209 222 aa13.22□□□□□ -0.29
TNFRSF1A-212ENST00000539372 ACOT6Q3I5F7 207 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF1A-212ENST00000539372 IBA57Q5T440 356 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1A-212ENST00000539372 VSIG2Q96IQ7 327 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms