RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 F8W735 103 aaPredicted RBP11.36□□□□□ -0.59
CDCA3-207ENST00000538862 NDUFS7O75251 213 aa11.36□□□□□ -0.59
CDCA3-207ENST00000538862 CT45A10P0DMU9 189 aa11.36□□□□□ -0.59
CDCA3-207ENST00000538862 TFPI2P48307 235 aa11.36□□□□□ -0.59
CDCA3-207ENST00000538862 ATP5J2P56134 94 aa11.36□□□□□ -0.59
CDCA3-207ENST00000538862 MINOS1Q5TGZ0 78 aa11.36□□□□□ -0.59
CDCA3-207ENST00000538862 PET117Q6UWS5 81 aa11.36□□□□□ -0.59
CDCA3-207ENST00000538862 ZNF493Q6ZR52 646 aa11.36□□□□□ -0.59
CDCA3-207ENST00000538862 COX8CQ7Z4L0 72 aa11.36□□□□□ -0.59
CDCA3-207ENST00000538862 LRRC75A-AS1Q8N1F1 130 aa11.36□□□□□ -0.59
CDCA3-207ENST00000538862 C21orf62Q9NYP8 219 aa11.36□□□□□ -0.59
CDCA3-207ENST00000538862 MINOS1-NBL1R4GNA1 71 aa11.36□□□□□ -0.59
CDCA3-207ENST00000538862 ARHGAP32A7KAX9 2087 aa11.36□□□□□ -0.59
CDCA3-207ENST00000538862 FBLL1A6NHQ2 334 aaKnown RBP11.35□□□□□ -0.59
CDCA3-207ENST00000538862 CBY3A6NI87 242 aa11.35□□□□□ -0.59
CDCA3-207ENST00000538862 M0R3E3 92 aa11.35□□□□□ -0.59
CDCA3-207ENST00000538862 SCGB2A1O75556 95 aa11.35□□□□□ -0.59
CDCA3-207ENST00000538862 RPS20P60866 119 aaKnown RBP11.35□□□□□ -0.59
CDCA3-207ENST00000538862 VMO1Q7Z5L0 202 aa11.35□□□□□ -0.59
CDCA3-207ENST00000538862 Q96MF0 132 aa11.35□□□□□ -0.59
CDCA3-207ENST00000538862 MAP1LC3CQ9BXW4 147 aa11.35□□□□□ -0.59
CDCA3-207ENST00000538862 TMEM191AQ9H0A3 160 aa11.35□□□□□ -0.59
CDCA3-207ENST00000538862 HSPB8Q9UJY1 196 aa11.35□□□□□ -0.59
CDCA3-207ENST00000538862 RPL7P18124 248 aaKnown RBP11.35□□□□□ -0.59
CDCA3-207ENST00000538862 PTTG1IPP53801 180 aa11.35□□□□□ -0.59
CDCA3-207ENST00000538862 FBLN7Q53RD9 439 aa11.35□□□□□ -0.59
CDCA3-207ENST00000538862 DTX2Q86UW9 622 aa11.35□□□□□ -0.59
CDCA3-207ENST00000538862 S4R3C0 116 aa11.35□□□□□ -0.59
CDCA3-207ENST00000538862 CSPG4Q6UVK1 2322 aa11.34□□□□□ -0.59
CDCA3-207ENST00000538862 NCBP2LA6PVI3 153 aaKnown RBP11.34□□□□□ -0.59
CDCA3-207ENST00000538862 LINC00173Q6ZV60 143 aa11.34□□□□□ -0.59
CDCA3-207ENST00000538862 BCL6BQ8N143 479 aaPredicted RBP11.34□□□□□ -0.59
CDCA3-207ENST00000538862 VPS25Q9BRG1 176 aa11.34□□□□□ -0.59
CDCA3-207ENST00000538862 S100A7P31151 101 aa11.33□□□□□ -0.6
CDCA3-207ENST00000538862 NDPQ00604 133 aa11.33□□□□□ -0.6
CDCA3-207ENST00000538862 C8orf49Q96NF6 230 aa11.33□□□□□ -0.6
CDCA3-207ENST00000538862 SMR3AQ99954 134 aa11.33□□□□□ -0.6
CDCA3-207ENST00000538862 A0A1W2PRD5 423 aa11.33□□□□□ -0.6
CDCA3-207ENST00000538862 A0A1W2PRF3 423 aa11.33□□□□□ -0.6
CDCA3-207ENST00000538862 A0A1W2PRM7 423 aa11.33□□□□□ -0.6
CDCA3-207ENST00000538862 NDUFB8O95169 186 aa11.33□□□□□ -0.6
CDCA3-207ENST00000538862 IGHV4-39P01824 125 aa11.33□□□□□ -0.6
CDCA3-207ENST00000538862 ZNF138P52744 262 aa11.33□□□□□ -0.6
CDCA3-207ENST00000538862 DYNAPQ8N1N2 210 aa11.33□□□□□ -0.6
CDCA3-207ENST00000538862 AP5S1Q9NUS5 200 aa11.33□□□□□ -0.6
CDCA3-207ENST00000538862 TMEM189A5PLL7 270 aa11.32□□□□□ -0.6
CDCA3-207ENST00000538862 SMAD7O15105 426 aaKnown RBP11.32□□□□□ -0.6
CDCA3-207ENST00000538862 HINT1P49773 126 aaPredicted RBP11.32□□□□□ -0.6
CDCA3-207ENST00000538862 RNF151Q2KHN1 245 aa11.32□□□□□ -0.6
CDCA3-207ENST00000538862 ASCL2Q99929 193 aa11.32□□□□□ -0.6
CDCA3-207ENST00000538862 C2CD3Q4AC94 2353 aa11.31□□□□□ -0.6
CDCA3-207ENST00000538862 CTSGP08311 255 aa11.31□□□□□ -0.6
CDCA3-207ENST00000538862 RABAC1Q9UI14 185 aa11.31□□□□□ -0.6
CDCA3-207ENST00000538862 SH2D1AO60880 128 aa11.31□□□□□ -0.6
CDCA3-207ENST00000538862 CSN3P07498 182 aa11.31□□□□□ -0.6
CDCA3-207ENST00000538862 EGR2P11161 476 aaPredicted RBP11.31□□□□□ -0.6
CDCA3-207ENST00000538862 LYZL1Q6UWQ5 148 aa11.31□□□□□ -0.6
CDCA3-207ENST00000538862 PRR25Q96S07 402 aa11.31□□□□□ -0.6
CDCA3-207ENST00000538862 MS4A6AQ9H2W1 248 aa11.31□□□□□ -0.6
CDCA3-207ENST00000538862 U3KQK5 164 aa11.31□□□□□ -0.6
CDCA3-207ENST00000538862 NIPBLQ6KC79 2804 aaeCLIP11.3□□□□□ -0.6
CDCA3-207ENST00000538862 IGHV7-81A0A0B4J1V7 117 aa11.3□□□□□ -0.6
CDCA3-207ENST00000538862 KLK9Q2XQG4 91 aa11.3□□□□□ -0.6
CDCA3-207ENST00000538862 LINC01545Q5VT33 79 aa11.3□□□□□ -0.6
CDCA3-207ENST00000538862 FA2HQ7L5A8 372 aa11.3□□□□□ -0.6
CDCA3-207ENST00000538862 OR10AG1Q8NH19 301 aa11.3□□□□□ -0.6
CDCA3-207ENST00000538862 PRSS3P2Q8NHM4 247 aa11.3□□□□□ -0.6
CDCA3-207ENST00000538862 KLK9Q9UKQ9 250 aa11.3□□□□□ -0.6
CDCA3-207ENST00000538862 NF1P21359 2839 aa11.29□□□□□ -0.6
CDCA3-207ENST00000538862 CR1P17927 2039 aa11.29□□□□□ -0.6
CDCA3-207ENST00000538862 OR2T8A6NH00 312 aa11.29□□□□□ -0.6
CDCA3-207ENST00000538862 UBE2V1Q13404 147 aa11.29□□□□□ -0.6
CDCA3-207ENST00000538862 FAM104BQ5XKR9 115 aa11.29□□□□□ -0.6
CDCA3-207ENST00000538862 MAPK1IP1LQ8NDC0 245 aa11.29□□□□□ -0.6
CDCA3-207ENST00000538862 ZNF747Q9BV97 191 aa11.29□□□□□ -0.6
CDCA3-207ENST00000538862 TPPP3Q9BW30 176 aa11.29□□□□□ -0.6
CDCA3-207ENST00000538862 SIRPDQ9H106 197 aa11.29□□□□□ -0.6
CDCA3-207ENST00000538862 hDV102S1A0JD36 115 aa11.29□□□□□ -0.6
CDCA3-207ENST00000538862 CCL25O15444 150 aa11.29□□□□□ -0.6
CDCA3-207ENST00000538862 FAM106CPP0CH98 169 aa11.29□□□□□ -0.6
CDCA3-207ENST00000538862 ZFP36P26651 326 aaKnown RBP11.29□□□□□ -0.6
CDCA3-207ENST00000538862 SRSF2Q01130 221 aaKnown RBP11.29□□□□□ -0.6
CDCA3-207ENST00000538862 SLC25A34Q6PIV7 304 aa11.29□□□□□ -0.6
CDCA3-207ENST00000538862 Q8N9W7 124 aa11.29□□□□□ -0.6
CDCA3-207ENST00000538862 IGKV2-40A0A087WW87 121 aaPredicted RBP11.28□□□□□ -0.6
CDCA3-207ENST00000538862 IGKV2D-40P01614 121 aaPredicted RBP11.28□□□□□ -0.6
CDCA3-207ENST00000538862 RAB9AP51151 201 aa11.28□□□□□ -0.6
CDCA3-207ENST00000538862 FAM110DQ8TAY7 271 aaPredicted RBP11.28□□□□□ -0.6
CDCA3-207ENST00000538862 SCRT2Q9NQ03 307 aa11.28□□□□□ -0.6
CDCA3-207ENST00000538862 SMAD5-AS1Q9Y6J3 95 aa11.28□□□□□ -0.6
CDCA3-207ENST00000538862 NSD1Q96L73 2696 aaPredicted RBP11.27□□□□□ -0.6
CDCA3-207ENST00000538862 J3KRW8 73 aa11.27□□□□□ -0.6
CDCA3-207ENST00000538862 IGHV3-23P01764 117 aa11.27□□□□□ -0.6
CDCA3-207ENST00000538862 PRB4P10163 310 aaPredicted RBP11.27□□□□□ -0.6
CDCA3-207ENST00000538862 ORMDL3Q8N138 153 aa11.27□□□□□ -0.6
CDCA3-207ENST00000538862 COX11Q9Y6N1 276 aa11.27□□□□□ -0.6
CDCA3-207ENST00000538862 D6R8Y8 96 aa11.27□□□□□ -0.61
CDCA3-207ENST00000538862 RNF223E7ERA6 249 aa11.27□□□□□ -0.61
CDCA3-207ENST00000538862 IGHG4P01861 327 aa11.27□□□□□ -0.61
CDCA3-207ENST00000538862 ZNF738Q8NE65 137 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms