RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 TOMM20LQ6UXN7 152 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 TMPRSS11AQ6ZMR5 421 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 MRPL52Q86TS9 123 aaKnown RBP3.4□□□□□ -1.87
CLIP1-207ENST00000536634 CBR4Q8N4T8 237 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 STXBP6Q8NFX7 210 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 MCFD2Q8NI22 146 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 DCANP1Q8TF63 244 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 TCTEX1D2Q8WW35 142 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 NKX6-2Q9C056 277 aaPredicted RBP3.4□□□□□ -1.87
CLIP1-207ENST00000536634 DCSTAMPQ9H295 470 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 HRASLSQ9HDD0 168 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 BET1LQ9NYM9 111 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 TAS2R8Q9NYW2 309 aa3.4□□□□□ -1.87
CLIP1-207ENST00000536634 F11RQ9Y624 299 aaKnown RBP3.4□□□□□ -1.87
CLIP1-207ENST00000536634 TRBV7-9A0A0J9YWB2 115 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 A0A0U1RRA0 63 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 TSTD3H0UI37 97 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 UPK2O00526 184 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 HPGDSO60760 199 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 HLA-DQB1P01920 261 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 NBEAP1P0C6P0 100 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 METTL15P1P0C7V9 234 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 CD37P11049 281 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 ZNF25P17030 456 aaPredicted RBP3.39□□□□□ -1.87
CLIP1-207ENST00000536634 PVALBP20472 110 aaPredicted RBP3.39□□□□□ -1.87
CLIP1-207ENST00000536634 MYL9P24844 172 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 CDC34P49427 236 aaPredicted RBP3.39□□□□□ -1.87
CLIP1-207ENST00000536634 CLDN12P56749 244 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 FXYD7P58549 80 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 AP3S2P59780 193 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 DEFB1P60022 68 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 RAB2AP61019 212 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 PRR4Q16378 134 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 PSMG4Q5JS54 123 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 TTC23Q5W5X9 447 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 LPCAT3Q6P1A2 487 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 Q6ZRN7 208 aaPredicted RBP3.39□□□□□ -1.87
CLIP1-207ENST00000536634 C15orf53Q8NAA6 179 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 DUSP18Q8NEJ0 188 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 TMEM203Q969S6 136 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 YIPF6Q96EC8 236 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 CENPNQ96H22 339 aaPredicted RBP3.39□□□□□ -1.87
CLIP1-207ENST00000536634 Q96MT0 163 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 SDHCQ99643 169 aaPredicted RBP3.39□□□□□ -1.87
CLIP1-207ENST00000536634 PRRT1Q99946 306 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 TMEM208Q9BTX3 173 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 SRRQ9GZT4 340 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 NAGKQ9UJ70 344 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 RFNGQ9Y644 331 aa3.39□□□□□ -1.87
CLIP1-207ENST00000536634 A0A075B6Q4 140 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 TEX50A0A1B0GTY4 177 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 TMEM189A5PLL7 270 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 H3BMM0 161 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 I3L2K1 104 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 MFNGO00587 321 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 PDCD5O14737 125 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 ATG12O94817 140 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 HRASP01112 189 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 PRM2P04554 102 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 CD5P06127 495 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 EIF4EP06730 217 aaKnown RBP3.38□□□□□ -1.87
CLIP1-207ENST00000536634 MYL12AP19105 171 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 LINC00315P59091 139 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 DAD1P61803 113 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 RRAS2P62070 204 aaPredicted RBP3.38□□□□□ -1.87
CLIP1-207ENST00000536634 ACSM3Q53FZ2 586 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 GDF5OSQ5U4N7 250 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 SSX7Q7RTT5 188 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 MS4A15Q8N5U1 240 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 SLC25A46Q96AG3 418 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 PACRGQ96M98 296 aaPredicted RBP3.38□□□□□ -1.87
CLIP1-207ENST00000536634 HSD17B10Q99714 261 aaKnown RBP3.38□□□□□ -1.87
CLIP1-207ENST00000536634 HINT2Q9BX68 163 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 COMMD5Q9GZQ3 224 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 Q9H3A6 140 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 NDUFA4L2Q9NRX3 87 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 YTHDF2Q9Y5A9 579 aaKnown RBP3.38□□□□□ -1.87
CLIP1-207ENST00000536634 ORC6Q9Y5N6 252 aa3.38□□□□□ -1.87
CLIP1-207ENST00000536634 A0A0A6YYH2 397 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 LOC100130705A0A1B0GUX0 176 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 HELTA6NFD8 242 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 SMIM9A6NGZ8 99 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 A6NJ64 397 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 MYL12BO14950 172 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 CYB5BO43169 146 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 MPC2O95563 127 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 MT-CO2P00403 227 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 HLA-DRB4P13762 266 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 FGF9P31371 208 aaPredicted RBP3.37□□□□□ -1.87
CLIP1-207ENST00000536634 P2RY1P47900 373 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 CCR6P51684 374 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 CCL18P55774 89 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 TAS2R31P59538 309 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 USF2Q15853 346 aaPredicted RBP3.37□□□□□ -1.87
CLIP1-207ENST00000536634 RAB11BQ15907 218 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 POU2AF1Q16633 256 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 FAM74A1Q5RGS3 127 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 Q6ZS49 121 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 C1orf158Q8N1D5 194 aa3.37□□□□□ -1.87
CLIP1-207ENST00000536634 DHRSXQ8N5I4 330 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms