RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 MAP1LC3BQ9GZQ8 125 aa12.98□□□□□ -0.33
CCDC61-201ENST00000536603 TMPRSS5Q9H3S3 457 aa12.98□□□□□ -0.33
CCDC61-201ENST00000536603 A0A1B0GV50 99 aa12.97□□□□□ -0.33
CCDC61-201ENST00000536603 GCHFRP30047 84 aa12.97□□□□□ -0.33
CCDC61-201ENST00000536603 EXOC3-AS1Q8N2X6 119 aa12.97□□□□□ -0.33
CCDC61-201ENST00000536603 PCNPQ8WW12 178 aaKnown RBP12.97□□□□□ -0.33
CCDC61-201ENST00000536603 M0R3E3 92 aa12.96□□□□□ -0.33
CCDC61-201ENST00000536603 AMBPP02760 352 aa12.96□□□□□ -0.33
CCDC61-201ENST00000536603 UBE2L3P68036 154 aaKnown RBP12.96□□□□□ -0.33
CCDC61-201ENST00000536603 CCL20P78556 96 aa12.96□□□□□ -0.33
CCDC61-201ENST00000536603 PQLC2Q6ZP29 291 aa12.96□□□□□ -0.33
CCDC61-201ENST00000536603 C1orf158Q8N1D5 194 aa12.96□□□□□ -0.33
CCDC61-201ENST00000536603 OR10J6PQ8NGY7 276 aa12.96□□□□□ -0.33
CCDC61-201ENST00000536603 SUN5Q8TC36 379 aa12.96□□□□□ -0.33
CCDC61-201ENST00000536603 SFT2D1Q8WV19 159 aa12.96□□□□□ -0.33
CCDC61-201ENST00000536603 IGF2BP2-AS1Q96M15 143 aa12.96□□□□□ -0.33
CCDC61-201ENST00000536603 GOLT1BQ9Y3E0 138 aa12.96□□□□□ -0.33
CCDC61-201ENST00000536603 TRAV12-2A0A075B6T6 113 aa12.95□□□□□ -0.34
CCDC61-201ENST00000536603 CRXO43186 299 aaPredicted RBP12.95□□□□□ -0.34
CCDC61-201ENST00000536603 CXorf1O96002 111 aa12.95□□□□□ -0.34
CCDC61-201ENST00000536603 H2AFB1P0C5Y9 115 aa12.95□□□□□ -0.34
CCDC61-201ENST00000536603 ICAM4Q14773 271 aa12.95□□□□□ -0.34
CCDC61-201ENST00000536603 C11orf45Q8TAV5 145 aa12.95□□□□□ -0.34
CCDC61-201ENST00000536603 MRPL53Q96EL3 112 aaKnown RBP12.95□□□□□ -0.34
CCDC61-201ENST00000536603 NEU1Q99519 415 aa12.95□□□□□ -0.34
CCDC61-201ENST00000536603 AAMDCQ9H7C9 122 aa12.95□□□□□ -0.34
CCDC61-201ENST00000536603 PRELID1Q9Y255 219 aa12.95□□□□□ -0.34
CCDC61-201ENST00000536603 NANOS2P60321 138 aaKnown RBP12.94□□□□□ -0.34
CCDC61-201ENST00000536603 TMEM208Q9BTX3 173 aa12.94□□□□□ -0.34
CCDC61-201ENST00000536603 TRAV1-1A0A0B4J248 108 aa12.93□□□□□ -0.34
CCDC61-201ENST00000536603 SMIM9A6NGZ8 99 aa12.93□□□□□ -0.34
CCDC61-201ENST00000536603 INSP01308 110 aa12.93□□□□□ -0.34
CCDC61-201ENST00000536603 IFNA7P01567 189 aa12.93□□□□□ -0.34
CCDC61-201ENST00000536603 RANP62826 216 aaKnown RBP12.93□□□□□ -0.34
CCDC61-201ENST00000536603 IQCF2Q8IXL9 164 aa12.93□□□□□ -0.34
CCDC61-201ENST00000536603 CT45A10P0DMU9 189 aa12.92□□□□□ -0.34
CCDC61-201ENST00000536603 CDKN1BP46527 198 aa12.92□□□□□ -0.34
CCDC61-201ENST00000536603 NPIPB6E9PJ23 425 aa12.91□□□□□ -0.34
CCDC61-201ENST00000536603 HBE1P02100 147 aa12.91□□□□□ -0.34
CCDC61-201ENST00000536603 NMBP08949 121 aa12.91□□□□□ -0.34
CCDC61-201ENST00000536603 ERCC8Q13216 396 aa12.91□□□□□ -0.34
CCDC61-201ENST00000536603 YTHDF2Q9Y5A9 579 aaKnown RBP12.91□□□□□ -0.34
CCDC61-201ENST00000536603 TSPOP30536 169 aa12.9□□□□□ -0.34
CCDC61-201ENST00000536603 EMP1P54849 157 aa12.9□□□□□ -0.34
CCDC61-201ENST00000536603 BLOC1S1P78537 153 aa12.9□□□□□ -0.34
CCDC61-201ENST00000536603 KIR3DS1Q14943 382 aa12.9□□□□□ -0.34
CCDC61-201ENST00000536603 LYPD1Q8N2G4 141 aa12.9□□□□□ -0.34
CCDC61-201ENST00000536603 LYPD6BQ8NI32 183 aa12.9□□□□□ -0.34
CCDC61-201ENST00000536603 PHLDA1Q8WV24 401 aaPredicted RBP12.9□□□□□ -0.34
CCDC61-201ENST00000536603 Q9H3A6 140 aa12.9□□□□□ -0.34
CCDC61-201ENST00000536603 TMEM167BQ9NRX6 74 aa12.9□□□□□ -0.34
CCDC61-201ENST00000536603 IGKV2-40A0A087WW87 121 aaPredicted RBP12.89□□□□□ -0.35
CCDC61-201ENST00000536603 J3KRW8 73 aa12.89□□□□□ -0.35
CCDC61-201ENST00000536603 IGKV2D-40P01614 121 aaPredicted RBP12.89□□□□□ -0.35
CCDC61-201ENST00000536603 PRM2P04554 102 aa12.89□□□□□ -0.35
CCDC61-201ENST00000536603 UBE2G2P60604 165 aa12.89□□□□□ -0.35
CCDC61-201ENST00000536603 RRN3P1Q2M238 152 aa12.89□□□□□ -0.35
CCDC61-201ENST00000536603 LINC00477Q96M19 166 aa12.89□□□□□ -0.35
CCDC61-201ENST00000536603 LINC01587Q99440 93 aa12.89□□□□□ -0.35
CCDC61-201ENST00000536603 AGPAT4-IT1Q9H0P7 198 aa12.89□□□□□ -0.35
CCDC61-201ENST00000536603 CELA1Q9UNI1 258 aa12.89□□□□□ -0.35
CCDC61-201ENST00000536603 LOC102723971A0A1B0GUV8 181 aa12.88□□□□□ -0.35
CCDC61-201ENST00000536603 TMEM189A5PLL7 270 aa12.88□□□□□ -0.35
CCDC61-201ENST00000536603 ZNF705GA8MUZ8 300 aaPredicted RBP12.88□□□□□ -0.35
CCDC61-201ENST00000536603 CSN1S1P47710 185 aa12.88□□□□□ -0.35
CCDC61-201ENST00000536603 LGALS9CQ6DKI2 356 aa12.88□□□□□ -0.35
CCDC61-201ENST00000536603 ODF3Q96PU9 254 aa12.88□□□□□ -0.35
CCDC61-201ENST00000536603 FAM74A7A6NL05 159 aa12.87□□□□□ -0.35
CCDC61-201ENST00000536603 GGTLC3B5MD39 225 aa12.87□□□□□ -0.35
CCDC61-201ENST00000536603 LEPP41159 167 aa12.87□□□□□ -0.35
CCDC61-201ENST00000536603 GFI1BQ5VTD9 330 aa12.87□□□□□ -0.35
CCDC61-201ENST00000536603 C9orf47Q6ZRZ4 202 aa12.87□□□□□ -0.35
CCDC61-201ENST00000536603 ZNF767PQ75MW2 155 aa12.87□□□□□ -0.35
CCDC61-201ENST00000536603 VGLL1Q99990 258 aa12.87□□□□□ -0.35
CCDC61-201ENST00000536603 FRAS1Q86XX4 4008 aa12.87□□□□□ -0.35
CCDC61-201ENST00000536603 PGPA6NDG6 321 aa12.86□□□□□ -0.35
CCDC61-201ENST00000536603 TEX46H3BTG2 121 aa12.86□□□□□ -0.35
CCDC61-201ENST00000536603 PAGE4O60829 102 aa12.86□□□□□ -0.35
CCDC61-201ENST00000536603 HTN1P15515 57 aa12.86□□□□□ -0.35
CCDC61-201ENST00000536603 TMEM78Q5T7P6 136 aa12.86□□□□□ -0.35
CCDC61-201ENST00000536603 TMEM256Q8N2U0 113 aa12.86□□□□□ -0.35
CCDC61-201ENST00000536603 OTORQ9NRC9 128 aa12.86□□□□□ -0.35
CCDC61-201ENST00000536603 GNG13Q9P2W3 67 aa12.86□□□□□ -0.35
CCDC61-201ENST00000536603 A0A1W2PRE2 83 aa12.85□□□□□ -0.35
CCDC61-201ENST00000536603 SPART-AS1P0CW21 52 aa12.85□□□□□ -0.35
CCDC61-201ENST00000536603 AZU1P20160 251 aa12.85□□□□□ -0.35
CCDC61-201ENST00000536603 ATP5G3P48201 142 aa12.85□□□□□ -0.35
CCDC61-201ENST00000536603 TAS2R60P59551 318 aa12.85□□□□□ -0.35
CCDC61-201ENST00000536603 C12orf74Q32Q52 190 aa12.85□□□□□ -0.35
CCDC61-201ENST00000536603 Q6ZTC4 211 aa12.85□□□□□ -0.35
CCDC61-201ENST00000536603 RXFP4Q8TDU9 374 aa12.85□□□□□ -0.35
CCDC61-201ENST00000536603 TRAV12-3A0A0B4J271 114 aa12.84□□□□□ -0.35
CCDC61-201ENST00000536603 DIRC3C9JPN6 131 aa12.84□□□□□ -0.35
CCDC61-201ENST00000536603 H7BYZ3 331 aa12.84□□□□□ -0.35
CCDC61-201ENST00000536603 RGS13O14921 159 aa12.84□□□□□ -0.35
CCDC61-201ENST00000536603 SUMO1P63165 101 aaKnown RBP12.84□□□□□ -0.35
CCDC61-201ENST00000536603 GNG5P63218 68 aa12.84□□□□□ -0.35
CCDC61-201ENST00000536603 FAM222AQ5U5X8 452 aa12.84□□□□□ -0.35
CCDC61-201ENST00000536603 CCDC28AQ8IWP9 274 aa12.84□□□□□ -0.35
CCDC61-201ENST00000536603 CMTM2Q8TAZ6 248 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms