RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 VGLL1Q99990 258 aa10.32□□□□□ -0.76
VPS33B-202ENST00000535906 FAM208BQ5VWN6 2430 aa10.31□□□□□ -0.76
VPS33B-202ENST00000535906 IGLL1P15814 213 aa10.31□□□□□ -0.76
VPS33B-202ENST00000535906 S100A7P31151 101 aa10.31□□□□□ -0.76
VPS33B-202ENST00000535906 CENPEQ02224 2701 aa10.31□□□□□ -0.76
VPS33B-202ENST00000535906 IGHV3-49A0A0A0MS15 119 aa10.31□□□□□ -0.76
VPS33B-202ENST00000535906 SYS1-DBNDD2H3BUS1 97 aa10.31□□□□□ -0.76
VPS33B-202ENST00000535906 ZNF207O43670 478 aaKnown RBP10.31□□□□□ -0.76
VPS33B-202ENST00000535906 RELQ04864 619 aaPredicted RBP10.31□□□□□ -0.76
VPS33B-202ENST00000535906 COX8CQ7Z4L0 72 aa10.31□□□□□ -0.76
VPS33B-202ENST00000535906 Q8TAT8 98 aa10.31□□□□□ -0.76
VPS33B-202ENST00000535906 PRR25Q96S07 402 aa10.31□□□□□ -0.76
VPS33B-202ENST00000535906 LAMTOR2Q9Y2Q5 125 aa10.31□□□□□ -0.76
VPS33B-202ENST00000535906 B4DSR2 109 aa10.3□□□□□ -0.76
VPS33B-202ENST00000535906 TRGV3P03979 118 aa10.3□□□□□ -0.76
VPS33B-202ENST00000535906 TSPOP30536 169 aa10.3□□□□□ -0.76
VPS33B-202ENST00000535906 RAB9AP51151 201 aa10.3□□□□□ -0.76
VPS33B-202ENST00000535906 ZNF138P52744 262 aa10.3□□□□□ -0.76
VPS33B-202ENST00000535906 LINC00173Q6ZV60 143 aa10.3□□□□□ -0.76
VPS33B-202ENST00000535906 TMEM208Q9BTX3 173 aa10.3□□□□□ -0.76
VPS33B-202ENST00000535906 CSPG4Q6UVK1 2322 aa10.3□□□□□ -0.76
VPS33B-202ENST00000535906 LRRK2Q5S007 2527 aa10.3□□□□□ -0.76
VPS33B-202ENST00000535906 A6NDX4 124 aa10.29□□□□□ -0.76
VPS33B-202ENST00000535906 OR4C46A6NHA9 309 aa10.29□□□□□ -0.76
VPS33B-202ENST00000535906 FBLL1A6NHQ2 334 aaKnown RBP10.29□□□□□ -0.76
VPS33B-202ENST00000535906 IGF1P05019 195 aa10.29□□□□□ -0.76
VPS33B-202ENST00000535906 SAPCD1Q5SSQ6 148 aa10.29□□□□□ -0.76
VPS33B-202ENST00000535906 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.29□□□□□ -0.76
VPS33B-202ENST00000535906 ZNF493Q6ZR52 646 aa10.29□□□□□ -0.76
VPS33B-202ENST00000535906 RNF182Q8N6D2 247 aa10.29□□□□□ -0.76
VPS33B-202ENST00000535906 MRPS16Q9Y3D3 137 aaKnown RBP10.29□□□□□ -0.76
VPS33B-202ENST00000535906 POLQO75417 2590 aa10.29□□□□□ -0.76
VPS33B-202ENST00000535906 A0A087X0K7 114 aa10.29□□□□□ -0.76
VPS33B-202ENST00000535906 FAM223BA6NKX1 122 aa10.29□□□□□ -0.76
VPS33B-202ENST00000535906 SH2D1AO60880 128 aa10.29□□□□□ -0.76
VPS33B-202ENST00000535906 BLCAPP62952 87 aa10.29□□□□□ -0.76
VPS33B-202ENST00000535906 Q6ZS46 218 aa10.29□□□□□ -0.76
VPS33B-202ENST00000535906 FAM223AQ8IWN6 122 aa10.29□□□□□ -0.76
VPS33B-202ENST00000535906 TPPP3Q9BW30 176 aa10.29□□□□□ -0.76
VPS33B-202ENST00000535906 UBR5O95071 2799 aaPredicted RBP10.29□□□□□ -0.76
VPS33B-202ENST00000535906 TMEM189A5PLL7 270 aa10.28□□□□□ -0.76
VPS33B-202ENST00000535906 PRAC2D3DTV9 90 aa10.28□□□□□ -0.76
VPS33B-202ENST00000535906 DLEU1O43261 78 aa10.28□□□□□ -0.76
VPS33B-202ENST00000535906 IGHG2P01859 326 aa10.28□□□□□ -0.76
VPS33B-202ENST00000535906 SRSF1Q07955 248 aaKnown RBP eCLIP10.28□□□□□ -0.76
VPS33B-202ENST00000535906 GAGE1Q13065 139 aa10.28□□□□□ -0.76
VPS33B-202ENST00000535906 METTL26Q96S19 204 aa10.28□□□□□ -0.76
VPS33B-202ENST00000535906 ANKRD17O75179 2603 aaKnown RBP10.28□□□□□ -0.76
VPS33B-202ENST00000535906 USP9YO00507 2555 aaPredicted RBP10.28□□□□□ -0.76
VPS33B-202ENST00000535906 TMSB15BA0A087X1C1 80 aa10.28□□□□□ -0.76
VPS33B-202ENST00000535906 PPIFP30405 207 aaKnown RBP10.28□□□□□ -0.76
VPS33B-202ENST00000535906 ZNF80P51504 273 aaPredicted RBP10.28□□□□□ -0.76
VPS33B-202ENST00000535906 ZNF124Q15973 351 aa10.28□□□□□ -0.76
VPS33B-202ENST00000535906 MAP1LC3CQ9BXW4 147 aa10.28□□□□□ -0.76
VPS33B-202ENST00000535906 HSPB8Q9UJY1 196 aa10.28□□□□□ -0.76
VPS33B-202ENST00000535906 ZANQ9Y493 2812 aa10.28□□□□□ -0.76
VPS33B-202ENST00000535906 TRBV12-3P01733 135 aa10.27□□□□□ -0.76
VPS33B-202ENST00000535906 CSN3P07498 182 aa10.27□□□□□ -0.76
VPS33B-202ENST00000535906 TFPI2P48307 235 aa10.27□□□□□ -0.76
VPS33B-202ENST00000535906 ERCC8Q13216 396 aa10.27□□□□□ -0.76
VPS33B-202ENST00000535906 LYZL1Q6UWQ5 148 aa10.27□□□□□ -0.76
VPS33B-202ENST00000535906 DSCR9P59020 149 aa10.27□□□□□ -0.77
VPS33B-202ENST00000535906 PET117Q6UWS5 81 aa10.27□□□□□ -0.77
VPS33B-202ENST00000535906 STPG4Q8N801 248 aa10.27□□□□□ -0.77
VPS33B-202ENST00000535906 ST20Q9HBF5 79 aa10.27□□□□□ -0.77
VPS33B-202ENST00000535906 AP5S1Q9NUS5 200 aa10.27□□□□□ -0.77
VPS33B-202ENST00000535906 U3KQE9 123 aa10.27□□□□□ -0.77
VPS33B-202ENST00000535906 A1L4Q6 167 aa10.26□□□□□ -0.77
VPS33B-202ENST00000535906 ARL3P36405 182 aa10.26□□□□□ -0.77
VPS33B-202ENST00000535906 ZNF843Q8N446 348 aa10.26□□□□□ -0.77
VPS33B-202ENST00000535906 ATP6V0BQ99437 205 aa10.26□□□□□ -0.77
VPS33B-202ENST00000535906 TMEM191AQ9H0A3 160 aa10.26□□□□□ -0.77
VPS33B-202ENST00000535906 KLK15Q9H2R5 256 aa10.26□□□□□ -0.77
VPS33B-202ENST00000535906 SLC50A1Q9BRV3 221 aa10.26□□□□□ -0.77
VPS33B-202ENST00000535906 TRAV8-2A0A0B4J237 113 aa10.25□□□□□ -0.77
VPS33B-202ENST00000535906 UNQ9165/PRO28630Q6UXU0 137 aa10.25□□□□□ -0.77
VPS33B-202ENST00000535906 ZNF575Q86XF7 245 aa10.25□□□□□ -0.77
VPS33B-202ENST00000535906 U3KQK5 164 aa10.25□□□□□ -0.77
VPS33B-202ENST00000535906 A0A096LNT2 108 aa10.25□□□□□ -0.77
VPS33B-202ENST00000535906 SLC25A16P16260 332 aa10.25□□□□□ -0.77
VPS33B-202ENST00000535906 BMI1P35226 326 aa10.25□□□□□ -0.77
VPS33B-202ENST00000535906 RPS20P60866 119 aaKnown RBP10.25□□□□□ -0.77
VPS33B-202ENST00000535906 FAM104BQ5XKR9 115 aa10.25□□□□□ -0.77
VPS33B-202ENST00000535906 FA2HQ7L5A8 372 aa10.25□□□□□ -0.77
VPS33B-202ENST00000535906 MAPK1IP1LQ8NDC0 245 aa10.25□□□□□ -0.77
VPS33B-202ENST00000535906 PRSS3P2Q8NHM4 247 aa10.25□□□□□ -0.77
VPS33B-202ENST00000535906 GOLT1BQ9Y3E0 138 aa10.25□□□□□ -0.77
VPS33B-202ENST00000535906 TMEM213A2RRL7 107 aa10.24□□□□□ -0.77
VPS33B-202ENST00000535906 IGHV3-11P01762 117 aa10.24□□□□□ -0.77
VPS33B-202ENST00000535906 COX6B1P14854 86 aa10.24□□□□□ -0.77
VPS33B-202ENST00000535906 GATA3P23771 443 aa10.24□□□□□ -0.77
VPS33B-202ENST00000535906 LCNL1Q6ZST4 164 aa10.24□□□□□ -0.77
VPS33B-202ENST00000535906 C8orf86Q6ZUL3 223 aa10.24□□□□□ -0.77
VPS33B-202ENST00000535906 D6R8Y8 96 aa10.24□□□□□ -0.77
VPS33B-202ENST00000535906 SRSF2Q01130 221 aaKnown RBP10.24□□□□□ -0.77
VPS33B-202ENST00000535906 OR10AG1Q8NH19 301 aa10.24□□□□□ -0.77
VPS33B-202ENST00000535906 EPG5Q9HCE0 2579 aa10.24□□□□□ -0.77
VPS33B-202ENST00000535906 MUC21A0A0G2JKD1 596 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 MUC21A0A140T8X8 626 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 hDV102S1A0JD36 115 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms