RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 IGHV6-1A0A0B4J1U7 121 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 TCRBV4S1A1TA0A5B7 111 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 E7EQL1 145 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 M0R381 172 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 TRBV12-3P01733 135 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 IL4P05112 153 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 CCKP06307 115 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 CCL4P13236 92 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 CD70P32970 193 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 CKS2P33552 79 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 ZNF136P52737 540 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 CRYBA2P53672 197 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 CAV3P56539 151 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 B3GALT5-AS1P59052 145 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 UBE2BP63146 152 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 INSL4Q14641 139 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 MLF2Q15773 248 aaPredicted RBP2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 Q1T7F1 81 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 SLC48A1Q6P1K1 146 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 ZFP2Q6ZN57 461 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 LINC00337Q8N6G1 96 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 NKAPP1Q8N9T2 125 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 DCANP1Q8TF63 244 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 PGLYRP4Q96LB8 373 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 TIMM17AQ99595 171 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 FAM103A1Q9BTL3 118 aaKnown RBP2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 PLEKHA3Q9HB20 300 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 XCL2Q9UBD3 114 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 F11RQ9Y624 299 aaKnown RBP2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 FRMPD3Q5JV73 1810 aa2.37□□□□□ -2.03
SPARCL1-208ENST00000535835 ERCC6L2Q5T890 1561 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 PPLO60437 1756 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 SCN1AP35498 2009 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 TRAV3A0A0B4J244 114 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 C12orf77C9JDV5 145 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 H7C423 109 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 J3QRE1 110 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 TMEM256-PLSCR3K7ERE1 68 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 M0R129 80 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 COX7A2LO14548 114 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 TIMM17BO60830 172 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 LEPROTL1O95214 131 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 SLC25A14O95258 325 aaPredicted RBP2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 IGHV3-9P01782 118 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 MDKP21741 143 aaPredicted RBP2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 S100A4P26447 101 aaKnown RBP2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 GCHFRP30047 84 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 DYNLT3P51808 116 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 ZNF117Q03924 483 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 RPL18Q07020 188 aaKnown RBP2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 KLKP1Q107X0 134 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 MDP1Q86V88 176 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 NDUFA11Q86Y39 141 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 MAPKAPK5-AS1Q8N8E1 139 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 Q8N8P6 123 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 NUP37Q8NFH4 326 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 ZNF563Q8TA94 476 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 TAS2R4Q9NYW5 299 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 MRPL35Q9NZE8 188 aaKnown RBP2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 SPRR3Q9UBC9 169 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 DENND4CQ5VZ89 1909 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 PKD1L3Q7Z443 1732 aa2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 TNRC6AQ8NDV7 1962 aaKnown RBP2.36□□□□□ -2.03
SPARCL1-208ENST00000535835 TET3O43151 1660 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 TOPAZ1Q8N9V7 1692 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 IGKV1D-8A0A087WSZ0 117 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 IGKV1D-13A0A0B4J2D9 117 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 A0A0J9YXV3 536 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 C4orf51C9J302 202 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 SLC25A20O43772 301 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 RBMY1CP0DJD4 496 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 IGKV1-13P0DP09 117 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 EFNA4P52798 201 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 LINC00313P59037 77 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 HERVK_113P61574 105 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 C6orf99Q4VX62 202 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 C7orf65Q6ZTY9 151 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 FAM19A3Q7Z5A8 133 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 SPTSSAQ969W0 71 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 C11orf52Q96A22 123 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 TMEM243Q9BU79 118 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 Q9H3A6 140 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 V9GY05 133 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 MYH14Q7Z406 1995 aaKnown RBP2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 DOCK3Q8IZD9 2030 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 SBF2Q86WG5 1849 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 TUBGCP6Q96RT7 1819 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 DNMT1P26358 1616 aaKnown RBP2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 AHDC1Q5TGY3 1603 aaPredicted RBP2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 ALKQ9UM73 1620 aa2.35□□□□□ -2.03
SPARCL1-208ENST00000535835 MYOM1P52179 1685 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 RGPD1P0DJD0 1748 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 KDM3BQ7LBC6 1761 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 MYO10Q9HD67 2058 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 TRAV13-2A0A0B4J235 113 aa2.34□□□□□ -2.03
SPARCL1-208ENST00000535835 A0A0B4J2C4 111 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms