RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 C11orf1Q9H5F2 150 aa7.7□□□□□ -1.18
CLSTN3-206ENST00000535668 TMEM14CQ9P0S9 112 aa7.7□□□□□ -1.18
CLSTN3-206ENST00000535668 MGAT4CQ9UBM8 478 aa7.7□□□□□ -1.18
CLSTN3-206ENST00000535668 TP53TG3Q9ULZ0 132 aa7.7□□□□□ -1.18
CLSTN3-206ENST00000535668 MYCBP2O75592 4640 aa7.69□□□□□ -1.18
CLSTN3-206ENST00000535668 SMCO3A2RU48 225 aa7.69□□□□□ -1.18
CLSTN3-206ENST00000535668 SNURFLB1AK76 121 aa7.69□□□□□ -1.18
CLSTN3-206ENST00000535668 SLC17A3O00476 420 aa7.69□□□□□ -1.18
CLSTN3-206ENST00000535668 SSSCA1O60232 199 aa7.69□□□□□ -1.18
CLSTN3-206ENST00000535668 ANXA7P20073 488 aaKnown RBP7.69□□□□□ -1.18
CLSTN3-206ENST00000535668 RPL29P47914 159 aaKnown RBP7.69□□□□□ -1.18
CLSTN3-206ENST00000535668 SLC38A11Q08AI6 406 aa7.69□□□□□ -1.18
CLSTN3-206ENST00000535668 OR5I1Q13606 314 aa7.69□□□□□ -1.18
CLSTN3-206ENST00000535668 C9orf62Q8N4C0 152 aa7.69□□□□□ -1.18
CLSTN3-206ENST00000535668 OR2T35Q8NGX2 323 aa7.69□□□□□ -1.18
CLSTN3-206ENST00000535668 LINC00477Q96M19 166 aa7.69□□□□□ -1.18
CLSTN3-206ENST00000535668 PRELID1Q9Y255 219 aa7.69□□□□□ -1.18
CLSTN3-206ENST00000535668 HSPB11Q9Y547 144 aa7.69□□□□□ -1.18
CLSTN3-206ENST00000535668 A0A0D9SG52 128 aa7.68□□□□□ -1.18
CLSTN3-206ENST00000535668 SPINK4O60575 86 aa7.68□□□□□ -1.18
CLSTN3-206ENST00000535668 MBPP02686 304 aaPredicted RBP7.68□□□□□ -1.18
CLSTN3-206ENST00000535668 SLAQ13239 276 aa7.68□□□□□ -1.18
CLSTN3-206ENST00000535668 IL15RAQ13261 267 aa7.68□□□□□ -1.18
CLSTN3-206ENST00000535668 RAB31Q13636 194 aa7.68□□□□□ -1.18
CLSTN3-206ENST00000535668 IAH1Q2TAA2 248 aaPredicted RBP7.68□□□□□ -1.18
CLSTN3-206ENST00000535668 MORN5Q5VZ52 161 aa7.68□□□□□ -1.18
CLSTN3-206ENST00000535668 C10orf113Q5VZT2 155 aa7.68□□□□□ -1.18
CLSTN3-206ENST00000535668 Q6ZRG5 221 aa7.68□□□□□ -1.18
CLSTN3-206ENST00000535668 C9orf47Q6ZRZ4 202 aa7.68□□□□□ -1.18
CLSTN3-206ENST00000535668 PFDN5Q99471 154 aa7.68□□□□□ -1.18
CLSTN3-206ENST00000535668 WDR83OSQ9Y284 106 aa7.68□□□□□ -1.18
CLSTN3-206ENST00000535668 FLG2Q5D862 2391 aaPredicted RBP7.67□□□□□ -1.18
CLSTN3-206ENST00000535668 TRBV19A0A075B6N1 114 aa7.67□□□□□ -1.18
CLSTN3-206ENST00000535668 SIVA1O15304 175 aa7.67□□□□□ -1.18
CLSTN3-206ENST00000535668 HTN1P15515 57 aa7.67□□□□□ -1.18
CLSTN3-206ENST00000535668 CAMLGP49069 296 aa7.67□□□□□ -1.18
CLSTN3-206ENST00000535668 TCL1AP56279 114 aa7.67□□□□□ -1.18
CLSTN3-206ENST00000535668 LINC00315P59091 139 aa7.67□□□□□ -1.18
CLSTN3-206ENST00000535668 RAB14P61106 215 aa7.67□□□□□ -1.18
CLSTN3-206ENST00000535668 ZNF345Q14585 488 aa7.67□□□□□ -1.18
CLSTN3-206ENST00000535668 Q6ZTI0 123 aa7.67□□□□□ -1.18
CLSTN3-206ENST00000535668 IQCF2Q8IXL9 164 aa7.67□□□□□ -1.18
CLSTN3-206ENST00000535668 LYPD1Q8N2G4 141 aa7.67□□□□□ -1.18
CLSTN3-206ENST00000535668 OR1L4Q8NGR5 311 aa7.67□□□□□ -1.18
CLSTN3-206ENST00000535668 ZNF586Q9NXT0 402 aa7.67□□□□□ -1.18
CLSTN3-206ENST00000535668 VPS13BQ7Z7G8 4022 aa7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 GAGE12BA1L429 117 aa7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 COX7A2P2O60397 106 aa7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 GAGE7O76087 117 aa7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 NDUFB4O95168 129 aa7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 GAGE12FP0CL80 117 aa7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 GAGE12GP0CL81 117 aa7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 GAGE12IP0CL82 117 aa7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 PET100P0DJ07 73 aa7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 NKX2-5P52952 324 aaPredicted RBP7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 XGP55808 180 aa7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 TEX261Q6UWH6 196 aa7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 NFE4Q86UQ8 179 aa7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 EIF4E3Q8N5X7 224 aaKnown RBP7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 VGLL1Q99990 258 aa7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 TMPRSS5Q9H3S3 457 aa7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 MED9Q9NWA0 146 aa7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 FLVCR2Q9UPI3 526 aa7.66□□□□□ -1.18
CLSTN3-206ENST00000535668 TRAV12-3A0A0B4J271 114 aa7.65□□□□□ -1.18
CLSTN3-206ENST00000535668 A0A0J9YY99 117 aa7.65□□□□□ -1.18
CLSTN3-206ENST00000535668 C7orf71A4D174 169 aa7.65□□□□□ -1.18
CLSTN3-206ENST00000535668 L7N2F9 121 aa7.65□□□□□ -1.18
CLSTN3-206ENST00000535668 MPDU1O75352 247 aa7.65□□□□□ -1.18
CLSTN3-206ENST00000535668 HIST1H1EP10412 219 aaKnown RBP7.65□□□□□ -1.18
CLSTN3-206ENST00000535668 S100A11P31949 105 aa7.65□□□□□ -1.18
CLSTN3-206ENST00000535668 ZFAND2AQ8N6M9 145 aa7.65□□□□□ -1.18
CLSTN3-206ENST00000535668 NMES1Q9C002 83 aa7.65□□□□□ -1.18
CLSTN3-206ENST00000535668 AGPAT4-IT1Q9H0P7 198 aa7.65□□□□□ -1.18
CLSTN3-206ENST00000535668 GSN-AS1Q9NRJ2 163 aa7.65□□□□□ -1.18
CLSTN3-206ENST00000535668 PRO0255Q9UI72 69 aa7.65□□□□□ -1.18
CLSTN3-206ENST00000535668 EPM2AB3EWF7 344 aa7.64□□□□□ -1.19
CLSTN3-206ENST00000535668 EIF5AP63241 154 aaKnown RBP7.64□□□□□ -1.19
CLSTN3-206ENST00000535668 LGALSLQ3ZCW2 172 aaPredicted RBP7.64□□□□□ -1.19
CLSTN3-206ENST00000535668 CLLU1Q5K131 121 aa7.64□□□□□ -1.19
CLSTN3-206ENST00000535668 SLC51BQ86UW2 128 aa7.64□□□□□ -1.19
CLSTN3-206ENST00000535668 PHYHIPLQ96FC7 376 aa7.64□□□□□ -1.19
CLSTN3-206ENST00000535668 SEC22CQ9BRL7 303 aa7.64□□□□□ -1.19
CLSTN3-206ENST00000535668 PARD6GQ9BYG4 376 aaPredicted RBP7.64□□□□□ -1.19
CLSTN3-206ENST00000535668 LYRM2Q9NU23 88 aaPredicted RBP7.64□□□□□ -1.19
CLSTN3-206ENST00000535668 SLC39A9Q9NUM3 307 aa7.64□□□□□ -1.19
CLSTN3-206ENST00000535668 UQCC1Q9NVA1 299 aa7.64□□□□□ -1.19
CLSTN3-206ENST00000535668 FUT9Q9Y231 359 aa7.64□□□□□ -1.19
CLSTN3-206ENST00000535668 KLF12Q9Y4X4 402 aa7.64□□□□□ -1.19
CLSTN3-206ENST00000535668 TRGV2A0A075B6R0 118 aa7.63□□□□□ -1.19
CLSTN3-206ENST00000535668 LINC00862A6NCI5 91 aa7.63□□□□□ -1.19
CLSTN3-206ENST00000535668 SULT1A1P50225 295 aa7.63□□□□□ -1.19
CLSTN3-206ENST00000535668 CRYBA4P53673 196 aa7.63□□□□□ -1.19
CLSTN3-206ENST00000535668 TIRAPP58753 221 aa7.63□□□□□ -1.19
CLSTN3-206ENST00000535668 MRPL23Q16540 153 aaKnown RBP7.63□□□□□ -1.19
CLSTN3-206ENST00000535668 ATP6V1FQ16864 119 aa7.63□□□□□ -1.19
CLSTN3-206ENST00000535668 THAP6Q8TBB0 222 aa7.63□□□□□ -1.19
CLSTN3-206ENST00000535668 RASL10AQ92737 203 aa7.63□□□□□ -1.19
CLSTN3-206ENST00000535668 MRPL32Q9BYC8 188 aaKnown RBP7.63□□□□□ -1.19
CLSTN3-206ENST00000535668 ICOSQ9Y6W8 199 aa7.63□□□□□ -1.19
CLSTN3-206ENST00000535668 TRAV9-2A0A087WT02 112 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms