RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 LTBP1Q14766 1721 aa14.49□□□□□ -0.09
SFSWAP-203ENST00000535236 PLA2G2CQ5R387 149 aa14.49□□□□□ -0.09
SFSWAP-203ENST00000535236 IGHV7-4-1A0A0J9YVY3 117 aa14.49□□□□□ -0.09
SFSWAP-203ENST00000535236 LRRK1Q38SD2 2015 aa14.48□□□□□ -0.09
SFSWAP-203ENST00000535236 CACNA1BQ00975 2339 aa14.48□□□□□ -0.09
SFSWAP-203ENST00000535236 PRSS29PA6NIE9 313 aa14.48□□□□□ -0.09
SFSWAP-203ENST00000535236 FAM120AOSQ5T036 256 aa14.48□□□□□ -0.09
SFSWAP-203ENST00000535236 MMP23AO75900 390 aa14.48□□□□□ -0.09
SFSWAP-203ENST00000535236 ANGP03950 147 aaKnown RBP14.48□□□□□ -0.09
SFSWAP-203ENST00000535236 MRAPQ8TCY5 172 aa14.48□□□□□ -0.09
SFSWAP-203ENST00000535236 PRR25Q96S07 402 aa14.48□□□□□ -0.09
SFSWAP-203ENST00000535236 ABCA4P78363 2273 aa14.48□□□□□ -0.09
SFSWAP-203ENST00000535236 MPDZO75970 2070 aa14.48□□□□□ -0.09
SFSWAP-203ENST00000535236 PROK2Q9HC23 129 aa14.47□□□□□ -0.09
SFSWAP-203ENST00000535236 TRAV26-2A0A0B4J265 109 aa14.47□□□□□ -0.09
SFSWAP-203ENST00000535236 TRAV25A0A0B4J276 109 aa14.47□□□□□ -0.09
SFSWAP-203ENST00000535236 WDR86Q86TI4 376 aa14.47□□□□□ -0.09
SFSWAP-203ENST00000535236 ETV2O00321 342 aaPredicted RBP14.47□□□□□ -0.09
SFSWAP-203ENST00000535236 FHL1Q13642 323 aa14.47□□□□□ -0.09
SFSWAP-203ENST00000535236 TPSG1Q9NRR2 321 aa14.47□□□□□ -0.09
SFSWAP-203ENST00000535236 TMEM14CQ9P0S9 112 aa14.47□□□□□ -0.09
SFSWAP-203ENST00000535236 TSSC4Q9Y5U2 329 aaPredicted RBP14.46□□□□□ -0.09
SFSWAP-203ENST00000535236 POLEQ07864 2286 aa14.46□□□□□ -0.09
SFSWAP-203ENST00000535236 MED12Q93074 2177 aa14.46□□□□□ -0.1
SFSWAP-203ENST00000535236 IGLV1-44P01699 117 aa14.46□□□□□ -0.1
SFSWAP-203ENST00000535236 SCRT2Q9NQ03 307 aa14.46□□□□□ -0.1
SFSWAP-203ENST00000535236 SLAQ13239 276 aa14.45□□□□□ -0.1
SFSWAP-203ENST00000535236 FAM215AQ9Y5M1 114 aa14.45□□□□□ -0.1
SFSWAP-203ENST00000535236 MRPL51Q4U2R6 128 aaKnown RBP14.45□□□□□ -0.1
SFSWAP-203ENST00000535236 GBF1Q92538 1859 aa14.45□□□□□ -0.1
SFSWAP-203ENST00000535236 ZNF134P52741 427 aa14.45□□□□□ -0.1
SFSWAP-203ENST00000535236 HEATR1Q9H583 2144 aaKnown RBP14.45□□□□□ -0.1
SFSWAP-203ENST00000535236 INAFM2P0DMQ5 153 aa14.45□□□□□ -0.1
SFSWAP-203ENST00000535236 Q0VG73 95 aa14.45□□□□□ -0.1
SFSWAP-203ENST00000535236 FER1L5A0AVI2 2057 aa14.44□□□□□ -0.1
SFSWAP-203ENST00000535236 CD5LO43866 347 aa14.44□□□□□ -0.1
SFSWAP-203ENST00000535236 TAL2Q16559 108 aa14.44□□□□□ -0.1
SFSWAP-203ENST00000535236 C22orf46C9J442 243 aa14.44□□□□□ -0.1
SFSWAP-203ENST00000535236 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.44□□□□□ -0.1
SFSWAP-203ENST00000535236 WT1-ASQ06250 92 aa14.44□□□□□ -0.1
SFSWAP-203ENST00000535236 TCF15Q12870 199 aa14.44□□□□□ -0.1
SFSWAP-203ENST00000535236 IGKV1-39P01597 117 aa14.44□□□□□ -0.1
SFSWAP-203ENST00000535236 IGKV1D-39P04432 117 aa14.44□□□□□ -0.1
SFSWAP-203ENST00000535236 H3BUA1 57 aa14.44□□□□□ -0.1
SFSWAP-203ENST00000535236 NBL1P41271 181 aa14.44□□□□□ -0.1
SFSWAP-203ENST00000535236 SBF1O95248 1867 aa14.43□□□□□ -0.1
SFSWAP-203ENST00000535236 C18orf32Q8TCD1 76 aa14.43□□□□□ -0.1
SFSWAP-203ENST00000535236 VPREB3Q9UKI3 123 aa14.43□□□□□ -0.1
SFSWAP-203ENST00000535236 ZNF503-AS2A6NEH8 195 aa14.43□□□□□ -0.1
SFSWAP-203ENST00000535236 NDUFA12Q9UI09 145 aa14.43□□□□□ -0.1
SFSWAP-203ENST00000535236 IGHV1-24A0A0C4DH33 117 aa14.43□□□□□ -0.1
SFSWAP-203ENST00000535236 DEFB112Q30KQ8 113 aa14.43□□□□□ -0.1
SFSWAP-203ENST00000535236 CYYR1Q96J86 154 aa14.43□□□□□ -0.1
SFSWAP-203ENST00000535236 ATP6V0BQ99437 205 aa14.43□□□□□ -0.1
SFSWAP-203ENST00000535236 UBE2WQ96B02 151 aa14.43□□□□□ -0.1
SFSWAP-203ENST00000535236 CLPSL2Q6UWE3 100 aa14.42□□□□□ -0.1
SFSWAP-203ENST00000535236 PRSS57Q6UWY2 283 aa14.42□□□□□ -0.1
SFSWAP-203ENST00000535236 ADAMTSL5Q6ZMM2 481 aa14.42□□□□□ -0.1
SFSWAP-203ENST00000535236 CRLF1O75462 422 aa14.42□□□□□ -0.1
SFSWAP-203ENST00000535236 IGKV2D-24A0A075B6R9 120 aa14.42□□□□□ -0.1
SFSWAP-203ENST00000535236 C15orf65H3BRN8 121 aa14.42□□□□□ -0.1
SFSWAP-203ENST00000535236 UBE2BP63146 152 aa14.42□□□□□ -0.1
SFSWAP-203ENST00000535236 IGKV1OR2-108A0A075B7D4 117 aa14.41□□□□□ -0.1
SFSWAP-203ENST00000535236 DIAPH2-AS1Q14236 149 aa14.41□□□□□ -0.1
SFSWAP-203ENST00000535236 RHOHQ15669 191 aa14.41□□□□□ -0.1
SFSWAP-203ENST00000535236 CFPP27918 469 aa14.41□□□□□ -0.1
SFSWAP-203ENST00000535236 HERVK_113P63121 156 aa14.41□□□□□ -0.1
SFSWAP-203ENST00000535236 A0A0J9YY99 117 aa14.41□□□□□ -0.1
SFSWAP-203ENST00000535236 SRSF2Q01130 221 aaKnown RBP14.41□□□□□ -0.1
SFSWAP-203ENST00000535236 FOXI2Q6ZQN5 318 aa14.41□□□□□ -0.1
SFSWAP-203ENST00000535236 HOXB4P17483 251 aaPredicted RBP14.41□□□□□ -0.1
SFSWAP-203ENST00000535236 FANCMQ8IYD8 2048 aa14.41□□□□□ -0.1
SFSWAP-203ENST00000535236 IGHV2-5P01817 119 aa14.41□□□□□ -0.1
SFSWAP-203ENST00000535236 DLEU1O43261 78 aa14.4□□□□□ -0.1
SFSWAP-203ENST00000535236 IGHV4-59P01825 116 aa14.4□□□□□ -0.1
SFSWAP-203ENST00000535236 PRSS33Q8NF86 280 aa14.4□□□□□ -0.1
SFSWAP-203ENST00000535236 ARFGEF3Q5TH69 2177 aa14.4□□□□□ -0.1
SFSWAP-203ENST00000535236 MRPL53Q96EL3 112 aaKnown RBP14.4□□□□□ -0.1
SFSWAP-203ENST00000535236 UBL5Q9BZL1 73 aa14.4□□□□□ -0.1
SFSWAP-203ENST00000535236 COL4A6Q14031 1691 aa14.4□□□□□ -0.1
SFSWAP-203ENST00000535236 NCOR1O75376 2440 aa14.4□□□□□ -0.1
SFSWAP-203ENST00000535236 NOP10Q9NPE3 64 aaKnown RBP14.4□□□□□ -0.1
SFSWAP-203ENST00000535236 CCL24O00175 119 aa14.4□□□□□ -0.1
SFSWAP-203ENST00000535236 KAAG1Q9UBP8 84 aa14.4□□□□□ -0.1
SFSWAP-203ENST00000535236 PYY3Q5JQD4 70 aa14.39□□□□□ -0.11
SFSWAP-203ENST00000535236 VOPP1Q96AW1 172 aa14.39□□□□□ -0.11
SFSWAP-203ENST00000535236 IGLC1P0CG04 106 aa14.39□□□□□ -0.11
SFSWAP-203ENST00000535236 HAMPP81172 84 aa14.39□□□□□ -0.11
SFSWAP-203ENST00000535236 UBE2V1Q13404 147 aa14.38□□□□□ -0.11
SFSWAP-203ENST00000535236 GTSF1LQ9H1H1 148 aa14.38□□□□□ -0.11
SFSWAP-203ENST00000535236 FAM231DQ6ZW35 169 aa14.38□□□□□ -0.11
SFSWAP-203ENST00000535236 MRPL52Q86TS9 123 aaKnown RBP14.38□□□□□ -0.11
SFSWAP-203ENST00000535236 SMIM2Q9BVW6 85 aa14.38□□□□□ -0.11
SFSWAP-203ENST00000535236 CADP27708 2225 aa14.38□□□□□ -0.11
SFSWAP-203ENST00000535236 PIP4P1Q86T03 277 aa14.38□□□□□ -0.11
SFSWAP-203ENST00000535236 DSCR8Q96T75 97 aa14.38□□□□□ -0.11
SFSWAP-203ENST00000535236 DKK4Q9UBT3 224 aa14.38□□□□□ -0.11
SFSWAP-203ENST00000535236 ZC2HC1AQ96GY0 325 aa14.38□□□□□ -0.11
SFSWAP-203ENST00000535236 SPINK8P0C7L1 97 aa14.37□□□□□ -0.11
SFSWAP-203ENST00000535236 MORN5Q5VZ52 161 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms