RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ZNF502Q8TBZ5 544 aa9.49□□□□□ -0.89
SCARB1-204ENST00000535005 EEF1AKMT3Q96AZ1 226 aa9.49□□□□□ -0.89
SCARB1-204ENST00000535005 GRAMD2BQ96HH9 432 aa9.49□□□□□ -0.89
SCARB1-204ENST00000535005 C21orf62Q9NYP8 219 aa9.49□□□□□ -0.89
SCARB1-204ENST00000535005 TENM1Q9UKZ4 2725 aa9.49□□□□□ -0.89
SCARB1-204ENST00000535005 CRXO43186 299 aaPredicted RBP9.49□□□□□ -0.89
SCARB1-204ENST00000535005 CD28P10747 220 aa9.49□□□□□ -0.89
SCARB1-204ENST00000535005 CRYBB3P26998 211 aa9.49□□□□□ -0.89
SCARB1-204ENST00000535005 MFAP4P55083 255 aa9.49□□□□□ -0.89
SCARB1-204ENST00000535005 KRTAP10-3P60369 221 aa9.49□□□□□ -0.89
SCARB1-204ENST00000535005 OR4F17Q8NGA8 305 aa9.49□□□□□ -0.89
SCARB1-204ENST00000535005 COL6A5A8TX70 2615 aa9.48□□□□□ -0.89
SCARB1-204ENST00000535005 IGLV2-8P01709 118 aa9.48□□□□□ -0.89
SCARB1-204ENST00000535005 SPATA31B1PQ5VZV4 182 aa9.48□□□□□ -0.89
SCARB1-204ENST00000535005 MRPL36Q9P0J6 103 aaKnown RBP9.48□□□□□ -0.89
SCARB1-204ENST00000535005 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.47□□□□□ -0.89
SCARB1-204ENST00000535005 IGHV3-21A0A0B4J1V1 117 aa9.47□□□□□ -0.89
SCARB1-204ENST00000535005 TCRBV4S1A1TA0A5B7 111 aa9.47□□□□□ -0.89
SCARB1-204ENST00000535005 F8W735 103 aaPredicted RBP9.47□□□□□ -0.89
SCARB1-204ENST00000535005 M0R2Z0 102 aa9.47□□□□□ -0.89
SCARB1-204ENST00000535005 HINT1P49773 126 aaPredicted RBP9.47□□□□□ -0.89
SCARB1-204ENST00000535005 C12orf54Q6X4T0 127 aa9.47□□□□□ -0.89
SCARB1-204ENST00000535005 MIR17HGQ75NE6 70 aa9.47□□□□□ -0.89
SCARB1-204ENST00000535005 TMEM190Q8WZ59 177 aa9.47□□□□□ -0.89
SCARB1-204ENST00000535005 CHCHD1Q96BP2 118 aaKnown RBP9.47□□□□□ -0.89
SCARB1-204ENST00000535005 CCDC140Q96MF4 163 aa9.47□□□□□ -0.89
SCARB1-204ENST00000535005 TMEM70Q9BUB7 260 aa9.47□□□□□ -0.89
SCARB1-204ENST00000535005 RNASE7Q9H1E1 156 aaKnown RBP9.47□□□□□ -0.89
SCARB1-204ENST00000535005 TSSC4Q9Y5U2 329 aaPredicted RBP9.47□□□□□ -0.89
SCARB1-204ENST00000535005 IGHV3-48P01763 117 aa9.47□□□□□ -0.89
SCARB1-204ENST00000535005 LGALS1P09382 135 aaKnown RBP9.47□□□□□ -0.89
SCARB1-204ENST00000535005 FRMD6-AS1P0C7T7 363 aa9.47□□□□□ -0.89
SCARB1-204ENST00000535005 C8orf88P0DMB2 117 aa9.47□□□□□ -0.89
SCARB1-204ENST00000535005 NTF3P20783 257 aa9.47□□□□□ -0.89
SCARB1-204ENST00000535005 RIPPLY3P57055 190 aa9.47□□□□□ -0.89
SCARB1-204ENST00000535005 KIAA1644Q3SXP7 199 aa9.47□□□□□ -0.89
SCARB1-204ENST00000535005 THAP8Q8NA92 274 aa9.47□□□□□ -0.89
SCARB1-204ENST00000535005 NPIPB3Q92617 1050 aa9.47□□□□□ -0.89
SCARB1-204ENST00000535005 CITED2Q99967 270 aaPredicted RBP9.47□□□□□ -0.89
SCARB1-204ENST00000535005 C2orf70A6NJV1 201 aa9.46□□□□□ -0.9
SCARB1-204ENST00000535005 GGTLC3B5MD39 225 aa9.46□□□□□ -0.9
SCARB1-204ENST00000535005 IGHV3-11P01762 117 aa9.46□□□□□ -0.9
SCARB1-204ENST00000535005 OR5AL1P0C617 328 aa9.46□□□□□ -0.9
SCARB1-204ENST00000535005 HIST1H1EP10412 219 aaKnown RBP9.46□□□□□ -0.9
SCARB1-204ENST00000535005 MRPL54Q6P161 138 aaKnown RBP9.46□□□□□ -0.9
SCARB1-204ENST00000535005 C4orf3Q8WVX3 66 aa9.46□□□□□ -0.9
SCARB1-204ENST00000535005 CITED1Q99966 193 aa9.46□□□□□ -0.9
SCARB1-204ENST00000535005 PMCHL2Q9BQD1 86 aa9.46□□□□□ -0.9
SCARB1-204ENST00000535005 S4R3C0 116 aa9.46□□□□□ -0.9
SCARB1-204ENST00000535005 CLEC3BP05452 202 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 CT83Q5H943 113 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 CLEC19AQ6UXS0 136 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 C11orf44Q8N8P7 122 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 ZNF747Q9BV97 191 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 MS4A6AQ9H2W1 248 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 PEF1Q9UBV8 284 aaKnown RBP9.45□□□□□ -0.9
SCARB1-204ENST00000535005 TRAV34A0A0B4J273 112 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 ADARB2-AS1A8MUL3 147 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 OR7C2O60412 319 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 IGHV3-23P01764 117 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 CTSGP08311 255 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 IGLC1P0CG04 106 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 MGST1P10620 155 aaKnown RBP9.45□□□□□ -0.9
SCARB1-204ENST00000535005 IGLL1P15814 213 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 TCL1AP56279 114 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 SLAQ13239 276 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 VAMP3Q15836 100 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 Q56UQ5 140 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 NDUFA11Q86Y39 141 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 FAM19A2Q8N3H0 131 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 DEFB125Q8N687 156 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 ZNF503Q96F45 646 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 TMEM191AQ9H0A3 160 aa9.45□□□□□ -0.9
SCARB1-204ENST00000535005 IGKV1D-37A0A075B6S9 117 aa9.44□□□□□ -0.9
SCARB1-204ENST00000535005 IGKV1OR2-108A0A075B7D4 117 aa9.44□□□□□ -0.9
SCARB1-204ENST00000535005 A0A1B0GXF2 115 aa9.44□□□□□ -0.9
SCARB1-204ENST00000535005 GNG7O60262 68 aa9.44□□□□□ -0.9
SCARB1-204ENST00000535005 GPR183P32249 361 aa9.44□□□□□ -0.9
SCARB1-204ENST00000535005 EBLN2Q6P2I7 272 aa9.44□□□□□ -0.9
SCARB1-204ENST00000535005 NHLRC2Q8NBF2 726 aa9.44□□□□□ -0.9
SCARB1-204ENST00000535005 TRGV9Q99603 122 aa9.44□□□□□ -0.9
SCARB1-204ENST00000535005 OR2T8A6NH00 312 aa9.43□□□□□ -0.9
SCARB1-204ENST00000535005 HSBP1L1C9JCN9 74 aa9.43□□□□□ -0.9
SCARB1-204ENST00000535005 SCGB2A1O75556 95 aa9.43□□□□□ -0.9
SCARB1-204ENST00000535005 IGKV1-17P01599 117 aa9.43□□□□□ -0.9
SCARB1-204ENST00000535005 TRBV12-3P01733 135 aa9.43□□□□□ -0.9
SCARB1-204ENST00000535005 KHDC1LQ5JSQ8 128 aa9.43□□□□□ -0.9
SCARB1-204ENST00000535005 SLC25A34Q6PIV7 304 aa9.43□□□□□ -0.9
SCARB1-204ENST00000535005 C18orf65Q6ZTR6 163 aa9.43□□□□□ -0.9
SCARB1-204ENST00000535005 KLHL30-AS1Q8NEE0 82 aa9.43□□□□□ -0.9
SCARB1-204ENST00000535005 STAB1Q9NY15 2570 aa9.43□□□□□ -0.9
SCARB1-204ENST00000535005 SPINK4O60575 86 aa9.42□□□□□ -0.9
SCARB1-204ENST00000535005 ARL3P36405 182 aa9.42□□□□□ -0.9
SCARB1-204ENST00000535005 LCN12Q6JVE5 192 aa9.42□□□□□ -0.9
SCARB1-204ENST00000535005 RNASEKQ6P5S7 137 aaKnown RBP9.42□□□□□ -0.9
SCARB1-204ENST00000535005 OR1L4Q8NGR5 311 aa9.42□□□□□ -0.9
SCARB1-204ENST00000535005 FAM231BA6NCW3 169 aa9.42□□□□□ -0.9
SCARB1-204ENST00000535005 K7ERU9 68 aa9.42□□□□□ -0.9
SCARB1-204ENST00000535005 PEX7O00628 323 aa9.42□□□□□ -0.9
SCARB1-204ENST00000535005 UBE2L3P68036 154 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms