RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 LOC100506127A0A0U1RQW1 187 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 DUXBA0A1W2PPF3 345 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 HLA-EP13747 358 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 CARD18P57730 90 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 UBE2BP63146 152 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 AESQ08117 197 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 TMED1Q13445 227 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 KRTAP19-6Q3LI70 58 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 Q3ZCU0 254 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 HIST2H3PS2Q5TEC6 136 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 LYRM7Q5U5X0 104 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 HACD4Q5VWC8 232 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 PIGXQ8TBF5 258 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 SLC25A40Q8TBP6 338 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 STAG3L4Q8TBR4 150 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 SMIM11BQ8TCY0 68 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 DNAJB3Q8WWF6 145 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 ARL5BQ96KC2 179 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 CNFNQ9BYD5 112 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 PKIGQ9Y2B9 76 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 NOSIPQ9Y314 301 aaKnown RBP-1.16□□□□□ -2.6
COPB1-212ENST00000534771 ATMQ13315 3056 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 MYO9AB2RTY4 2548 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 NISCHQ9Y2I1 1504 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 CSPG4Q6UVK1 2322 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 RAD50Q92878 1312 aa-1.16□□□□□ -2.6
COPB1-212ENST00000534771 ADGRG4Q8IZF6 3080 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 SSC5DA1L4H1 1573 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 KIAA1549LQ6ZVL6 1849 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.17□□□□□ -2.62e-7■■■■■ 27.8
COPB1-212ENST00000534771 TRANK1O15050 2925 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 ACACBO00763 2458 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 TRPM7Q96QT4 1865 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 OR4C46A6NHA9 309 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 GGCTO75223 188 aaKnown RBP-1.17□□□□□ -2.6
COPB1-212ENST00000534771 APOEP02649 317 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 TCRBP04435 133 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 APODP05090 189 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 SMIM17P0DL12 118 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 RPS12P25398 132 aaKnown RBP-1.17□□□□□ -2.6
COPB1-212ENST00000534771 MLLT11Q13015 90 aaPredicted RBP-1.17□□□□□ -2.6
COPB1-212ENST00000534771 KLRD1Q13241 179 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 PMS2P3Q13401 168 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 DIAPH2-AS1Q14236 149 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 VMA21Q3ZAQ7 101 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 CSAG1Q6PB30 78 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 GOLT1AQ6ZVE7 132 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 TMEM86BQ8N661 226 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 OR4K15Q8NH41 348 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 PPP1R2P1Q96PQ5 205 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 TVP23BQ9NYZ1 205 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 VIRMAQ69YN4 1812 aaKnown RBP-1.17□□□□□ -2.6
COPB1-212ENST00000534771 FRMPD1Q5SYB0 1578 aa-1.17□□□□□ -2.6
COPB1-212ENST00000534771 NCAPD3P42695 1498 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 CEP164Q9UPV0 1460 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 REV3LO60673 3130 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 hCG_1818297A0A087WSY0 165 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 ZNF815PA8K554 130 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 A8MT66 165 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 C9JAW5 83 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 IGF2P01344 180 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 IVLP07476 585 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 PHBP35232 272 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 GLRXP35754 106 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 BLVRAP53004 296 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 RRN3P1Q2M238 152 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 Q6Q795 121 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 C3orf62Q6ZUJ4 267 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 C12orf45Q8N5I9 185 aaPredicted RBP-1.18□□□□□ -2.6
COPB1-212ENST00000534771 RAB8BQ92930 207 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 MRPS26Q9BYN8 205 aaKnown RBP-1.18□□□□□ -2.6
COPB1-212ENST00000534771 DRC3Q9H069 523 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 ENY2Q9NPA8 101 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 PLEKHJ1Q9NW61 149 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 FMN1Q68DA7 1419 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 BPTFQ12830 3046 aa-1.18□□□□□ -2.6
COPB1-212ENST00000534771 DLEC1Q9Y238 1755 aa-1.19□□□□□ -2.6
COPB1-212ENST00000534771 A0A0D9SFI3 127 aa-1.19□□□□□ -2.6
COPB1-212ENST00000534771 TMEM256-PLSCR3K7ERE1 68 aa-1.19□□□□□ -2.6
COPB1-212ENST00000534771 LYRM1O43325 122 aa-1.19□□□□□ -2.6
COPB1-212ENST00000534771 OCMP0CE72 109 aaPredicted RBP-1.19□□□□□ -2.6
COPB1-212ENST00000534771 IDO1P14902 403 aa-1.19□□□□□ -2.6
COPB1-212ENST00000534771 ANK1P16157 1881 aa-1.19□□□□□ -2.6
COPB1-212ENST00000534771 DYNLT3P51808 116 aa-1.19□□□□□ -2.6
COPB1-212ENST00000534771 TCL1AP56279 114 aa-1.19□□□□□ -2.6
COPB1-212ENST00000534771 SPCS3P61009 180 aa-1.19□□□□□ -2.6
COPB1-212ENST00000534771 OGFRL1Q5TC84 451 aaPredicted RBP-1.19□□□□□ -2.6
COPB1-212ENST00000534771 C1orf140Q5VVS0 124 aa-1.19□□□□□ -2.6
COPB1-212ENST00000534771 UBE2DNLQ8IWF7 75 aa-1.19□□□□□ -2.6
COPB1-212ENST00000534771 OR6V1Q8N148 313 aa-1.19□□□□□ -2.6
COPB1-212ENST00000534771 CT55Q8WUE5 264 aa-1.19□□□□□ -2.6
COPB1-212ENST00000534771 OR52A5Q9H2C5 316 aa-1.19□□□□□ -2.6
COPB1-212ENST00000534771 CHMP5Q9NZZ3 219 aa-1.19□□□□□ -2.6
COPB1-212ENST00000534771 MRPL36Q9P0J6 103 aaKnown RBP-1.19□□□□□ -2.6
COPB1-212ENST00000534771 SPAG17Q6Q759 2223 aa-1.19□□□□□ -2.6
COPB1-212ENST00000534771 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.19□□□□□ -2.6
COPB1-212ENST00000534771 MYH9P35579 1960 aaKnown RBP-1.19□□□□□ -2.6
COPB1-212ENST00000534771 KIF1BO60333 1816 aa-1.19□□□□□ -2.6
COPB1-212ENST00000534771 CPDO75976 1380 aa-1.2□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms