RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 POU2AF1Q16633 256 aa13.81□□□□□ -0.2
PHRF1-206ENST00000534320 UBE2WQ96B02 151 aa13.81□□□□□ -0.2
PHRF1-206ENST00000534320 TPSG1Q9NRR2 321 aa13.81□□□□□ -0.2
PHRF1-206ENST00000534320 MALRD1Q5VYJ5 2156 aa13.81□□□□□ -0.2
PHRF1-206ENST00000534320 SRRM4A7MD48 611 aaKnown RBP13.8□□□□□ -0.2
PHRF1-206ENST00000534320 AZU1P20160 251 aa13.8□□□□□ -0.2
PHRF1-206ENST00000534320 USMG5Q96IX5 58 aa13.8□□□□□ -0.2
PHRF1-206ENST00000534320 C10orf91Q5T1B1 145 aa13.8□□□□□ -0.2
PHRF1-206ENST00000534320 FAM223BA6NKX1 122 aa13.8□□□□□ -0.2
PHRF1-206ENST00000534320 FAM223AQ8IWN6 122 aa13.8□□□□□ -0.2
PHRF1-206ENST00000534320 IGHV2-70DA0A0C4DH43 119 aa13.8□□□□□ -0.2
PHRF1-206ENST00000534320 GAGE5Q13069 117 aa13.8□□□□□ -0.2
PHRF1-206ENST00000534320 GAGE6Q13070 117 aa13.8□□□□□ -0.2
PHRF1-206ENST00000534320 RUSC1-AS1Q66K80 236 aa13.8□□□□□ -0.2
PHRF1-206ENST00000534320 A0A0U1RRA0 63 aa13.79□□□□□ -0.2
PHRF1-206ENST00000534320 C9orf139Q6ZV77 190 aa13.79□□□□□ -0.2
PHRF1-206ENST00000534320 LAMTOR3Q9UHA4 124 aa13.79□□□□□ -0.2
PHRF1-206ENST00000534320 Q8TAT8 98 aa13.79□□□□□ -0.2
PHRF1-206ENST00000534320 LINC00158P58513 81 aa13.79□□□□□ -0.2
PHRF1-206ENST00000534320 ZNF138P52744 262 aa13.79□□□□□ -0.2
PHRF1-206ENST00000534320 IGFL4Q6B9Z1 124 aa13.79□□□□□ -0.2
PHRF1-206ENST00000534320 CTSZQ9UBR2 303 aa13.79□□□□□ -0.2
PHRF1-206ENST00000534320 MED13Q9UHV7 2174 aa13.79□□□□□ -0.2
PHRF1-206ENST00000534320 MED13LQ71F56 2210 aa13.79□□□□□ -0.2
PHRF1-206ENST00000534320 IGHV3-64A0A075B6Q5 118 aa13.78□□□□□ -0.2
PHRF1-206ENST00000534320 MSMBP08118 114 aa13.78□□□□□ -0.2
PHRF1-206ENST00000534320 LINC01356Q8N9X3 169 aa13.78□□□□□ -0.2
PHRF1-206ENST00000534320 MRAPQ8TCY5 172 aa13.78□□□□□ -0.2
PHRF1-206ENST00000534320 ATP6V0E1O15342 81 aa13.78□□□□□ -0.2
PHRF1-206ENST00000534320 GRNP28799 593 aaKnown RBP13.78□□□□□ -0.2
PHRF1-206ENST00000534320 PMVKQ15126 192 aa13.78□□□□□ -0.2
PHRF1-206ENST00000534320 LYZL1Q6UWQ5 148 aa13.78□□□□□ -0.2
PHRF1-206ENST00000534320 FREM1Q5H8C1 2179 aa13.78□□□□□ -0.2
PHRF1-206ENST00000534320 SEM1Q6ZVN7 128 aa13.78□□□□□ -0.2
PHRF1-206ENST00000534320 FAM110DQ8TAY7 271 aaPredicted RBP13.78□□□□□ -0.2
PHRF1-206ENST00000534320 MALP21145 153 aa13.78□□□□□ -0.2
PHRF1-206ENST00000534320 ZNF415Q09FC8 603 aa13.78□□□□□ -0.2
PHRF1-206ENST00000534320 Q86TA4 180 aa13.78□□□□□ -0.2
PHRF1-206ENST00000534320 SH2D1AO60880 128 aa13.77□□□□□ -0.2
PHRF1-206ENST00000534320 PRR31Q5SQ13 230 aa13.77□□□□□ -0.2
PHRF1-206ENST00000534320 NDUFB8O95169 186 aa13.77□□□□□ -0.2
PHRF1-206ENST00000534320 YPEL3P61236 119 aaPredicted RBP13.77□□□□□ -0.2
PHRF1-206ENST00000534320 PDE6HQ13956 83 aa13.77□□□□□ -0.21
PHRF1-206ENST00000534320 JPT2Q9H910 190 aa13.77□□□□□ -0.21
PHRF1-206ENST00000534320 WFDC12Q8WWY7 111 aa13.77□□□□□ -0.21
PHRF1-206ENST00000534320 NCOA6Q14686 2063 aaPredicted RBP13.77□□□□□ -0.21
PHRF1-206ENST00000534320 C11orf44Q8N8P7 122 aa13.76□□□□□ -0.21
PHRF1-206ENST00000534320 C10orf142B7Z368 130 aa13.76□□□□□ -0.21
PHRF1-206ENST00000534320 PFN1P07737 140 aaKnown RBP13.76□□□□□ -0.21
PHRF1-206ENST00000534320 C8orf31Q8N9H6 132 aa13.76□□□□□ -0.21
PHRF1-206ENST00000534320 LSM4Q9Y4Z0 139 aaKnown RBP13.76□□□□□ -0.21
PHRF1-206ENST00000534320 IGHV1-69DA0A0B4J2H0 117 aa13.76□□□□□ -0.21
PHRF1-206ENST00000534320 WISP2O76076 250 aa13.76□□□□□ -0.21
PHRF1-206ENST00000534320 IGHV1-69P01742 117 aa13.76□□□□□ -0.21
PHRF1-206ENST00000534320 NCR2O95944 276 aa13.76□□□□□ -0.21
PHRF1-206ENST00000534320 IGHV2-5P01817 119 aa13.76□□□□□ -0.21
PHRF1-206ENST00000534320 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.75□□□□□ -0.212e-7■■■■□ 23.9
PHRF1-206ENST00000534320 STHQ8IWL8 128 aa13.75□□□□□ -0.21
PHRF1-206ENST00000534320 PTPRSQ13332 1948 aa13.75□□□□□ -0.21
PHRF1-206ENST00000534320 SP5Q6BEB4 398 aaPredicted RBP13.75□□□□□ -0.21
PHRF1-206ENST00000534320 FCN3O75636 299 aa13.75□□□□□ -0.21
PHRF1-206ENST00000534320 PAX4O43316 350 aa13.74□□□□□ -0.21
PHRF1-206ENST00000534320 UTF1Q5T230 341 aa13.74□□□□□ -0.21
PHRF1-206ENST00000534320 GATA3P23771 443 aa13.74□□□□□ -0.21
PHRF1-206ENST00000534320 C22orf46C9J442 243 aa13.74□□□□□ -0.21
PHRF1-206ENST00000534320 NEGR1Q7Z3B1 354 aa13.74□□□□□ -0.21
PHRF1-206ENST00000534320 LYPD6BQ8NI32 183 aa13.74□□□□□ -0.21
PHRF1-206ENST00000534320 TMEM258P61165 79 aa13.74□□□□□ -0.21
PHRF1-206ENST00000534320 B5MCH6 92 aa13.73□□□□□ -0.21
PHRF1-206ENST00000534320 NPC2P61916 151 aa13.73□□□□□ -0.21
PHRF1-206ENST00000534320 LINC00477Q96M19 166 aa13.73□□□□□ -0.21
PHRF1-206ENST00000534320 SOCS3O14543 225 aa13.73□□□□□ -0.21
PHRF1-206ENST00000534320 RASL10AQ92737 203 aa13.73□□□□□ -0.21
PHRF1-206ENST00000534320 G3V318 75 aa13.73□□□□□ -0.21
PHRF1-206ENST00000534320 ZNF688P0C7X2 276 aa13.73□□□□□ -0.21
PHRF1-206ENST00000534320 RHPN1-AS1Q9BWJ2 59 aa13.73□□□□□ -0.21
PHRF1-206ENST00000534320 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
PHRF1-206ENST00000534320 TMEM158Q8WZ71 300 aa13.73□□□□□ -0.21
PHRF1-206ENST00000534320 C1QTNF4Q9BXJ3 329 aa13.72□□□□□ -0.21
PHRF1-206ENST00000534320 ALPK3Q96L96 1907 aa13.72□□□□□ -0.21
PHRF1-206ENST00000534320 TRGV11A0A075B6L2 103 aa13.72□□□□□ -0.21
PHRF1-206ENST00000534320 STPG4Q8N801 248 aa13.72□□□□□ -0.21
PHRF1-206ENST00000534320 C1orf43Q9BWL3 253 aa13.72□□□□□ -0.21
PHRF1-206ENST00000534320 A0A1W2PPM0 123 aa13.72□□□□□ -0.21
PHRF1-206ENST00000534320 LEPROTO15243 131 aa13.72□□□□□ -0.21
PHRF1-206ENST00000534320 PRR20EP86478 221 aa13.72□□□□□ -0.21
PHRF1-206ENST00000534320 PRR20CP86479 221 aa13.72□□□□□ -0.21
PHRF1-206ENST00000534320 PRR20DP86480 221 aa13.72□□□□□ -0.21
PHRF1-206ENST00000534320 PRR20BP86481 221 aa13.72□□□□□ -0.21
PHRF1-206ENST00000534320 PRR20AP86496 221 aa13.72□□□□□ -0.21
PHRF1-206ENST00000534320 MYMXA0A1B0GTQ4 84 aa13.72□□□□□ -0.21
PHRF1-206ENST00000534320 RNF223E7ERA6 249 aa13.72□□□□□ -0.21
PHRF1-206ENST00000534320 SS18L2Q9UHA2 77 aa13.72□□□□□ -0.21
PHRF1-206ENST00000534320 TRBV19A0A075B6N1 114 aa13.71□□□□□ -0.21
PHRF1-206ENST00000534320 TRGV2A0A075B6R0 118 aa13.71□□□□□ -0.21
PHRF1-206ENST00000534320 THAP8Q8NA92 274 aa13.71□□□□□ -0.21
PHRF1-206ENST00000534320 PCNX3Q9H6A9 2034 aa13.71□□□□□ -0.21
PHRF1-206ENST00000534320 ABCA1O95477 2261 aa13.71□□□□□ -0.21
PHRF1-206ENST00000534320 OVOL3O00110 214 aa13.71□□□□□ -0.21
PHRF1-206ENST00000534320 VWC2Q2TAL6 325 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms