RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 C11orf1Q9H5F2 150 aa6.37□□□□□ -1.39
PACS1-214ENST00000533811 ZNF98A6NK75 572 aa6.36□□□□□ -1.39
PACS1-214ENST00000533811 ORM2P19652 201 aa6.36□□□□□ -1.39
PACS1-214ENST00000533811 HOXA5P20719 270 aa6.36□□□□□ -1.39
PACS1-214ENST00000533811 GPX4P36969 197 aaPredicted RBP6.36□□□□□ -1.39
PACS1-214ENST00000533811 SULT1A1P50225 295 aa6.36□□□□□ -1.39
PACS1-214ENST00000533811 RAB14P61106 215 aa6.36□□□□□ -1.39
PACS1-214ENST00000533811 ICAM4Q14773 271 aa6.36□□□□□ -1.39
PACS1-214ENST00000533811 Q6ZRN7 208 aaPredicted RBP6.36□□□□□ -1.39
PACS1-214ENST00000533811 Q6ZSN1 163 aa6.36□□□□□ -1.39
PACS1-214ENST00000533811 TMEM263Q8WUH6 116 aaKnown RBP6.36□□□□□ -1.39
PACS1-214ENST00000533811 TRGV9Q99603 122 aa6.36□□□□□ -1.39
PACS1-214ENST00000533811 OR5AC2Q9NZP5 309 aa6.36□□□□□ -1.39
PACS1-214ENST00000533811 TNFRSF18Q9Y5U5 241 aa6.36□□□□□ -1.39
PACS1-214ENST00000533811 TRAV8-2A0A0B4J237 113 aa6.35□□□□□ -1.39
PACS1-214ENST00000533811 SIVA1O15304 175 aa6.35□□□□□ -1.39
PACS1-214ENST00000533811 GATA2P23769 480 aaPredicted RBP6.35□□□□□ -1.39
PACS1-214ENST00000533811 CAV2P51636 162 aa6.35□□□□□ -1.39
PACS1-214ENST00000533811 ATP6V1FQ16864 119 aa6.35□□□□□ -1.39
PACS1-214ENST00000533811 ZNF493Q6ZR52 646 aa6.35□□□□□ -1.39
PACS1-214ENST00000533811 TMEM252Q8N6L7 170 aa6.35□□□□□ -1.39
PACS1-214ENST00000533811 ZNF680Q8NEM1 530 aa6.35□□□□□ -1.39
PACS1-214ENST00000533811 OR10P1Q8NGE3 313 aa6.35□□□□□ -1.39
PACS1-214ENST00000533811 OR1B1Q8NGR6 318 aa6.35□□□□□ -1.39
PACS1-214ENST00000533811 RNASE8Q8TDE3 154 aaKnown RBP6.35□□□□□ -1.39
PACS1-214ENST00000533811 ZNF503Q96F45 646 aa6.35□□□□□ -1.39
PACS1-214ENST00000533811 TMEM147Q9BVK8 224 aa6.35□□□□□ -1.39
PACS1-214ENST00000533811 ZNF471Q9BX82 626 aaPredicted RBP6.35□□□□□ -1.39
PACS1-214ENST00000533811 PARD6GQ9BYG4 376 aaPredicted RBP6.35□□□□□ -1.39
PACS1-214ENST00000533811 SRRM2Q9UQ35 2752 aaKnown RBP6.34□□□□□ -1.39
PACS1-214ENST00000533811 FAM24AA6NFZ4 105 aa6.34□□□□□ -1.39
PACS1-214ENST00000533811 SNURFLB1AK76 121 aa6.34□□□□□ -1.39
PACS1-214ENST00000533811 H3BP45 60 aa6.34□□□□□ -1.39
PACS1-214ENST00000533811 IFITM2Q01629 132 aa6.34□□□□□ -1.39
PACS1-214ENST00000533811 TMEM14EPQ6UXP3 125 aa6.34□□□□□ -1.39
PACS1-214ENST00000533811 CCDC28AQ8IWP9 274 aa6.34□□□□□ -1.39
PACS1-214ENST00000533811 BPIFCQ8NFQ6 507 aa6.34□□□□□ -1.39
PACS1-214ENST00000533811 OR8A1Q8NGG7 326 aa6.34□□□□□ -1.39
PACS1-214ENST00000533811 GGACTQ9BVM4 153 aa6.34□□□□□ -1.39
PACS1-214ENST00000533811 TMPRSS5Q9H3S3 457 aa6.34□□□□□ -1.39
PACS1-214ENST00000533811 IGKV1OR2-108A0A075B7D4 117 aa6.33□□□□□ -1.4
PACS1-214ENST00000533811 A0A087WTM6 91 aa6.33□□□□□ -1.4
PACS1-214ENST00000533811 FNDC10F2Z333 226 aa6.33□□□□□ -1.4
PACS1-214ENST00000533811 H7BYZ3 331 aa6.33□□□□□ -1.4
PACS1-214ENST00000533811 J3KRW8 73 aa6.33□□□□□ -1.4
PACS1-214ENST00000533811 NXPH4O95158 308 aa6.33□□□□□ -1.4
PACS1-214ENST00000533811 CFDP00746 253 aaPredicted RBP6.33□□□□□ -1.4
PACS1-214ENST00000533811 SEC11BP0C7V7 166 aa6.33□□□□□ -1.4
PACS1-214ENST00000533811 METTL15P1P0C7V9 234 aa6.33□□□□□ -1.4
PACS1-214ENST00000533811 GCSHP23434 173 aa6.33□□□□□ -1.4
PACS1-214ENST00000533811 CDKN1BP46527 198 aa6.33□□□□□ -1.4
PACS1-214ENST00000533811 RAB5CP51148 216 aa6.33□□□□□ -1.4
PACS1-214ENST00000533811 CLLU1Q5K131 121 aa6.33□□□□□ -1.4
PACS1-214ENST00000533811 THAP8Q8NA92 274 aa6.33□□□□□ -1.4
PACS1-214ENST00000533811 GPR82Q96P67 336 aa6.33□□□□□ -1.4
PACS1-214ENST00000533811 ATP5SQ99766 215 aa6.33□□□□□ -1.4
PACS1-214ENST00000533811 ARV1Q9H2C2 271 aa6.33□□□□□ -1.4
PACS1-214ENST00000533811 KCNIP2Q9NS61 270 aa6.33□□□□□ -1.4
PACS1-214ENST00000533811 A0A096LPF7 62 aa6.32□□□□□ -1.4
PACS1-214ENST00000533811 PMS2P5A8MQ11 134 aa6.32□□□□□ -1.4
PACS1-214ENST00000533811 UMAD1C9J7I0 102 aa6.32□□□□□ -1.4
PACS1-214ENST00000533811 H3BNG1 76 aa6.32□□□□□ -1.4
PACS1-214ENST00000533811 MPDU1O75352 247 aa6.32□□□□□ -1.4
PACS1-214ENST00000533811 CST7O76096 145 aa6.32□□□□□ -1.4
PACS1-214ENST00000533811 S100A7P31151 101 aa6.32□□□□□ -1.4
PACS1-214ENST00000533811 AKR1C1Q04828 323 aa6.32□□□□□ -1.4
PACS1-214ENST00000533811 KIR3DS1Q14943 382 aa6.32□□□□□ -1.4
PACS1-214ENST00000533811 PSG3Q16557 428 aa6.32□□□□□ -1.4
PACS1-214ENST00000533811 NFE4Q86UQ8 179 aa6.32□□□□□ -1.4
PACS1-214ENST00000533811 LINC00612Q8N6U2 182 aa6.32□□□□□ -1.4
PACS1-214ENST00000533811 NPVFQ9HCQ7 196 aa6.32□□□□□ -1.4
PACS1-214ENST00000533811 MED9Q9NWA0 146 aa6.32□□□□□ -1.4
PACS1-214ENST00000533811 SLC45A2Q9UMX9 530 aa6.32□□□□□ -1.4
PACS1-214ENST00000533811 TRGV2A0A075B6R0 118 aa6.31□□□□□ -1.4
PACS1-214ENST00000533811 IGSF23A1L1A6 192 aa6.31□□□□□ -1.4
PACS1-214ENST00000533811 PRSS46E5RG02 174 aa6.31□□□□□ -1.4
PACS1-214ENST00000533811 H3BRN7 92 aa6.31□□□□□ -1.4
PACS1-214ENST00000533811 RPL7P18124 248 aaKnown RBP6.31□□□□□ -1.4
PACS1-214ENST00000533811 NHLH2Q02577 135 aa6.31□□□□□ -1.4
PACS1-214ENST00000533811 DPPA3Q6W0C5 159 aa6.31□□□□□ -1.4
PACS1-214ENST00000533811 TMEM182Q6ZP80 229 aaPredicted RBP6.31□□□□□ -1.4
PACS1-214ENST00000533811 Q6ZTI0 123 aa6.31□□□□□ -1.4
PACS1-214ENST00000533811 OR5C1Q8NGR4 320 aa6.31□□□□□ -1.4
PACS1-214ENST00000533811 RPUSD4Q96CM3 377 aaKnown RBP6.31□□□□□ -1.4
PACS1-214ENST00000533811 SAT2Q96F10 170 aaPredicted RBP6.31□□□□□ -1.4
PACS1-214ENST00000533811 VSIG2Q96IQ7 327 aa6.31□□□□□ -1.4
PACS1-214ENST00000533811 PSMG3Q9BT73 122 aaPredicted RBP6.31□□□□□ -1.4
PACS1-214ENST00000533811 CYTL1Q9NRR1 136 aa6.31□□□□□ -1.4
PACS1-214ENST00000533811 HIGD1AQ9Y241 93 aa6.31□□□□□ -1.4
PACS1-214ENST00000533811 TIMM9Q9Y5J7 89 aa6.31□□□□□ -1.4
PACS1-214ENST00000533811 SMCO3A2RU48 225 aa6.3□□□□□ -1.4
PACS1-214ENST00000533811 SNRPCP09234 159 aaKnown RBP6.3□□□□□ -1.4
PACS1-214ENST00000533811 OR5G3P0C626 314 aa6.3□□□□□ -1.4
PACS1-214ENST00000533811 BLOC1S1P78537 153 aa6.3□□□□□ -1.4
PACS1-214ENST00000533811 SERF2P84101 59 aa6.3□□□□□ -1.4
PACS1-214ENST00000533811 SLC38A11Q08AI6 406 aa6.3□□□□□ -1.4
PACS1-214ENST00000533811 ARL16Q0P5N6 197 aa6.3□□□□□ -1.4
PACS1-214ENST00000533811 RAB31Q13636 194 aa6.3□□□□□ -1.4
PACS1-214ENST00000533811 VWC2Q2TAL6 325 aa6.3□□□□□ -1.4
PACS1-214ENST00000533811 GFI1BQ5VTD9 330 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms