RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 COL5A1-AS1Q5SY13 56 aa11.81□□□□□ -0.52
CACNA1E-208ENST00000533229 C10orf105Q8TEF2 133 aa11.81□□□□□ -0.52
CACNA1E-208ENST00000533229 PIMREGQ9BSJ6 248 aa11.81□□□□□ -0.52
CACNA1E-208ENST00000533229 TRAV9-2A0A087WT02 112 aa11.8□□□□□ -0.52
CACNA1E-208ENST00000533229 TRAV41A0A0B4J266 112 aa11.8□□□□□ -0.52
CACNA1E-208ENST00000533229 SYS1-DBNDD2H3BUS1 97 aa11.8□□□□□ -0.52
CACNA1E-208ENST00000533229 AMN1Q8IY45 258 aa11.8□□□□□ -0.52
CACNA1E-208ENST00000533229 HNRNPA3P51991 378 aaKnown RBP11.8□□□□□ -0.52
CACNA1E-208ENST00000533229 ATP5G2Q06055 141 aa11.8□□□□□ -0.52
CACNA1E-208ENST00000533229 FAM106AQ4KMX7 169 aa11.8□□□□□ -0.52
CACNA1E-208ENST00000533229 MCRIP2Q9BUT9 160 aaKnown RBP11.8□□□□□ -0.52
CACNA1E-208ENST00000533229 SPG11Q96JI7 2443 aa11.79□□□□□ -0.52
CACNA1E-208ENST00000533229 IGHV4-30-2A0A087WSY4 118 aa11.79□□□□□ -0.52
CACNA1E-208ENST00000533229 TRAV8-2A0A0B4J237 113 aa11.79□□□□□ -0.52
CACNA1E-208ENST00000533229 FBLL1A6NHQ2 334 aaKnown RBP11.79□□□□□ -0.52
CACNA1E-208ENST00000533229 D6R8Y8 96 aa11.79□□□□□ -0.52
CACNA1E-208ENST00000533229 S100A7P31151 101 aa11.79□□□□□ -0.52
CACNA1E-208ENST00000533229 RAB9AP51151 201 aa11.79□□□□□ -0.52
CACNA1E-208ENST00000533229 IGSF10Q6WRI0 2623 aa11.79□□□□□ -0.52
CACNA1E-208ENST00000533229 IGLC6P0CF74 106 aa11.78□□□□□ -0.52
CACNA1E-208ENST00000533229 BMI1P35226 326 aa11.78□□□□□ -0.52
CACNA1E-208ENST00000533229 FAM104BQ5XKR9 115 aa11.78□□□□□ -0.52
CACNA1E-208ENST00000533229 IL17RELQ6ZVW7 336 aa11.78□□□□□ -0.52
CACNA1E-208ENST00000533229 KLHDC1Q8N7A1 406 aa11.78□□□□□ -0.52
CACNA1E-208ENST00000533229 MEGF9Q9H1U4 602 aa11.78□□□□□ -0.52
CACNA1E-208ENST00000533229 TP73-AS1Q9UF72 201 aa11.78□□□□□ -0.52
CACNA1E-208ENST00000533229 LAMTOR2Q9Y2Q5 125 aa11.78□□□□□ -0.52
CACNA1E-208ENST00000533229 OR4C46A6NHA9 309 aa11.78□□□□□ -0.52
CACNA1E-208ENST00000533229 LY6EQ16553 131 aa11.78□□□□□ -0.52
CACNA1E-208ENST00000533229 Q6ZVH6 145 aa11.78□□□□□ -0.52
CACNA1E-208ENST00000533229 FER1L6-AS1Q8NA97 138 aa11.78□□□□□ -0.52
CACNA1E-208ENST00000533229 TIMM8BQ9Y5J9 83 aaPredicted RBP11.78□□□□□ -0.52
CACNA1E-208ENST00000533229 U3KQE9 123 aa11.78□□□□□ -0.52
CACNA1E-208ENST00000533229 TRBV12-3P01733 135 aa11.77□□□□□ -0.52
CACNA1E-208ENST00000533229 ORM1P02763 201 aa11.77□□□□□ -0.52
CACNA1E-208ENST00000533229 IFI27P40305 119 aaPredicted RBP11.77□□□□□ -0.52
CACNA1E-208ENST00000533229 LOXL1Q08397 574 aaPredicted RBP11.77□□□□□ -0.52
CACNA1E-208ENST00000533229 METTL26Q96S19 204 aa11.77□□□□□ -0.52
CACNA1E-208ENST00000533229 AGPAT4-IT1Q9H0P7 198 aa11.77□□□□□ -0.52
CACNA1E-208ENST00000533229 AP5S1Q9NUS5 200 aa11.77□□□□□ -0.52
CACNA1E-208ENST00000533229 MSRB1Q9NZV6 116 aa11.77□□□□□ -0.52
CACNA1E-208ENST00000533229 U3KQK5 164 aa11.77□□□□□ -0.52
CACNA1E-208ENST00000533229 USP9XQ93008 2570 aaPredicted RBP11.77□□□□□ -0.53
CACNA1E-208ENST00000533229 OR5AL1P0C617 328 aa11.77□□□□□ -0.53
CACNA1E-208ENST00000533229 TSPOP30536 169 aa11.77□□□□□ -0.53
CACNA1E-208ENST00000533229 CRIP2P52943 208 aaPredicted RBP11.77□□□□□ -0.53
CACNA1E-208ENST00000533229 ATP5J2P56134 94 aa11.77□□□□□ -0.53
CACNA1E-208ENST00000533229 TWIST1Q15672 202 aa11.77□□□□□ -0.53
CACNA1E-208ENST00000533229 MRPL51Q4U2R6 128 aaKnown RBP11.77□□□□□ -0.53
CACNA1E-208ENST00000533229 DMRTA1Q5VZB9 504 aa11.77□□□□□ -0.53
CACNA1E-208ENST00000533229 PRSS3P2Q8NHM4 247 aa11.77□□□□□ -0.53
CACNA1E-208ENST00000533229 SLC50A1Q9BRV3 221 aa11.77□□□□□ -0.53
CACNA1E-208ENST00000533229 LOC389332A0A1B0GUA5 103 aa11.76□□□□□ -0.53
CACNA1E-208ENST00000533229 FABP5P3A8MUU1 101 aa11.76□□□□□ -0.53
CACNA1E-208ENST00000533229 TRGV3P03979 118 aa11.76□□□□□ -0.53
CACNA1E-208ENST00000533229 C8orf86Q6ZUL3 223 aa11.76□□□□□ -0.53
CACNA1E-208ENST00000533229 CRYBG3Q68DQ2 2970 aa11.76□□□□□ -0.53
CACNA1E-208ENST00000533229 UTP20O75691 2785 aaKnown RBP11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 DOPEY1Q5JWR5 2465 aa11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 A0A096LNJ9 63 aa11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 RBAKDNA6NC62 111 aa11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 HINT1P49773 126 aaPredicted RBP11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 CLEC2AQ6UVW9 174 aa11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 UNQ9165/PRO28630Q6UXU0 137 aa11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 Q6ZS46 218 aa11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 SIGLEC8Q9NYZ4 499 aa11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 hDV102S1A0JD36 115 aa11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 FAM223BA6NKX1 122 aa11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 H0Y8G0 127 aa11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 SMKR1H3BMG3 65 aa11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 RPS20P60866 119 aaKnown RBP11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 BLCAPP62952 87 aa11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 FAM223AQ8IWN6 122 aa11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 PRELID3AQ96N28 172 aa11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 C11orf21Q9P2W6 132 aa11.75□□□□□ -0.53
CACNA1E-208ENST00000533229 H3BUX3 64 aa11.74□□□□□ -0.53
CACNA1E-208ENST00000533229 NDUFS8O00217 210 aa11.74□□□□□ -0.53
CACNA1E-208ENST00000533229 AVPP01185 164 aa11.74□□□□□ -0.53
CACNA1E-208ENST00000533229 IGF1P05019 195 aa11.74□□□□□ -0.53
CACNA1E-208ENST00000533229 PPIFP30405 207 aaKnown RBP11.74□□□□□ -0.53
CACNA1E-208ENST00000533229 Q6ZQT7 251 aa11.74□□□□□ -0.53
CACNA1E-208ENST00000533229 FA2HQ7L5A8 372 aa11.74□□□□□ -0.53
CACNA1E-208ENST00000533229 ORMDL3Q8N138 153 aa11.74□□□□□ -0.53
CACNA1E-208ENST00000533229 NRGNQ92686 78 aa11.74□□□□□ -0.53
CACNA1E-208ENST00000533229 PMCHL2Q9BQD1 86 aa11.74□□□□□ -0.53
CACNA1E-208ENST00000533229 MAP1LC3CQ9BXW4 147 aa11.74□□□□□ -0.53
CACNA1E-208ENST00000533229 IGKV3D-20A0A0C4DH25 116 aa11.74□□□□□ -0.53
CACNA1E-208ENST00000533229 TCF21O43680 179 aa11.74□□□□□ -0.53
CACNA1E-208ENST00000533229 ARL3P36405 182 aa11.74□□□□□ -0.53
CACNA1E-208ENST00000533229 SRSF2Q01130 221 aaKnown RBP11.74□□□□□ -0.53
CACNA1E-208ENST00000533229 ZNF747Q9BV97 191 aa11.74□□□□□ -0.53
CACNA1E-208ENST00000533229 KLK15Q9H2R5 256 aa11.74□□□□□ -0.53
CACNA1E-208ENST00000533229 C20orf202A1L168 122 aa11.73□□□□□ -0.53
CACNA1E-208ENST00000533229 SMAD7O15105 426 aaKnown RBP11.73□□□□□ -0.53
CACNA1E-208ENST00000533229 GAS8-AS1O95177 125 aa11.73□□□□□ -0.53
CACNA1E-208ENST00000533229 LINC01559Q495D7 138 aa11.73□□□□□ -0.53
CACNA1E-208ENST00000533229 CNFNQ9BYD5 112 aa11.73□□□□□ -0.53
CACNA1E-208ENST00000533229 HSPB8Q9UJY1 196 aa11.73□□□□□ -0.53
CACNA1E-208ENST00000533229 A6NDX4 124 aa11.72□□□□□ -0.53
CACNA1E-208ENST00000533229 NCR2O95944 276 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms