RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 DYNAPQ8N1N2 210 aa6.23□□□□□ -1.41
CTNND1-230ENST00000532245 ARL6IP6Q8N6S5 226 aa6.23□□□□□ -1.41
CTNND1-230ENST00000532245 C4orf3Q8WVX3 66 aa6.23□□□□□ -1.41
CTNND1-230ENST00000532245 IGHV1OR15-1A0A075B7D0 117 aa6.23□□□□□ -1.41
CTNND1-230ENST00000532245 Q86TA4 180 aa6.23□□□□□ -1.41
CTNND1-230ENST00000532245 LRP4O75096 1905 aa6.22□□□□□ -1.41
CTNND1-230ENST00000532245 RAB37Q96AX2 223 aa6.22□□□□□ -1.41
CTNND1-230ENST00000532245 LOC102724200A0A096LPH7 203 aaPredicted RBP6.22□□□□□ -1.41
CTNND1-230ENST00000532245 TRAV8-6A0A0B4J262 113 aa6.22□□□□□ -1.41
CTNND1-230ENST00000532245 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.22□□□□□ -1.41
CTNND1-230ENST00000532245 IGLV2-23P01705 113 aa6.22□□□□□ -1.41
CTNND1-230ENST00000532245 SPAG8Q99932 426 aaPredicted RBP6.22□□□□□ -1.41
CTNND1-230ENST00000532245 FASNP49327 2511 aaKnown RBP6.22□□□□□ -1.41
CTNND1-230ENST00000532245 HLA-DMBP28068 263 aa6.22□□□□□ -1.41
CTNND1-230ENST00000532245 CD300EQ496F6 205 aaPredicted RBP6.22□□□□□ -1.41
CTNND1-230ENST00000532245 ZNF414Q96IQ9 312 aa6.22□□□□□ -1.41
CTNND1-230ENST00000532245 IGLV11-55A0A075B6I3 123 aa6.22□□□□□ -1.41
CTNND1-230ENST00000532245 SMAD5-AS1Q9Y6J3 95 aa6.22□□□□□ -1.41
CTNND1-230ENST00000532245 NUP210LQ5VU65 1888 aa6.22□□□□□ -1.41
CTNND1-230ENST00000532245 DOCK11Q5JSL3 2073 aa6.22□□□□□ -1.41
CTNND1-230ENST00000532245 NDUFA3O95167 84 aa6.21□□□□□ -1.41
CTNND1-230ENST00000532245 SRSF1Q07955 248 aaKnown RBP eCLIP6.21□□□□□ -1.411e-7■□□□□ 10.7
CTNND1-230ENST00000532245 ODF3L1Q8IXM7 274 aa6.21□□□□□ -1.41
CTNND1-230ENST00000532245 ATOH7Q8N100 152 aa6.21□□□□□ -1.41
CTNND1-230ENST00000532245 CYSLTR1Q9Y271 337 aa6.21□□□□□ -1.41
CTNND1-230ENST00000532245 A0A0J9YY99 117 aa6.21□□□□□ -1.41
CTNND1-230ENST00000532245 LINC01548A6NM66 108 aa6.21□□□□□ -1.41
CTNND1-230ENST00000532245 FOXI2Q6ZQN5 318 aa6.21□□□□□ -1.41
CTNND1-230ENST00000532245 LY6G5BQ8NDX9 201 aa6.21□□□□□ -1.41
CTNND1-230ENST00000532245 TMEM190Q8WZ59 177 aa6.21□□□□□ -1.41
CTNND1-230ENST00000532245 A0A087X0M5 115 aa6.21□□□□□ -1.42
CTNND1-230ENST00000532245 A0A1B0GX30 115 aa6.21□□□□□ -1.42
CTNND1-230ENST00000532245 ATP5LO75964 103 aa6.21□□□□□ -1.42
CTNND1-230ENST00000532245 C17orf77Q96MU5 243 aa6.21□□□□□ -1.42
CTNND1-230ENST00000532245 ATP6V0BQ99437 205 aa6.21□□□□□ -1.42
CTNND1-230ENST00000532245 WNK1Q9H4A3 2382 aa6.21□□□□□ -1.42
CTNND1-230ENST00000532245 DNAH12Q6ZR08 3092 aa6.21□□□□□ -1.42
CTNND1-230ENST00000532245 K7EIM0 57 aa6.21□□□□□ -1.42
CTNND1-230ENST00000532245 THAP8Q8NA92 274 aa6.21□□□□□ -1.42
CTNND1-230ENST00000532245 C1orf159Q96HA4 380 aa6.21□□□□□ -1.42
CTNND1-230ENST00000532245 NOP10Q9NPE3 64 aaKnown RBP6.21□□□□□ -1.42
CTNND1-230ENST00000532245 C2orf70A6NJV1 201 aa6.21□□□□□ -1.42
CTNND1-230ENST00000532245 ODF3BA8MYP8 253 aa6.21□□□□□ -1.42
CTNND1-230ENST00000532245 PFN1P07737 140 aaKnown RBP6.21□□□□□ -1.42
CTNND1-230ENST00000532245 UTF1Q5T230 341 aa6.21□□□□□ -1.42
CTNND1-230ENST00000532245 NCOA6Q14686 2063 aaPredicted RBP6.2□□□□□ -1.42
CTNND1-230ENST00000532245 ZNF462Q96JM2 2506 aa6.2□□□□□ -1.42
CTNND1-230ENST00000532245 ANXA2RQ3ZCQ2 193 aa6.2□□□□□ -1.42
CTNND1-230ENST00000532245 FAM19A2Q8N3H0 131 aa6.2□□□□□ -1.42
CTNND1-230ENST00000532245 OR5A1Q8NGJ0 315 aa6.2□□□□□ -1.42
CTNND1-230ENST00000532245 WIPF2Q8TF74 440 aaPredicted RBP6.2□□□□□ -1.42
CTNND1-230ENST00000532245 IGF2BP2-AS1Q96M15 143 aa6.2□□□□□ -1.42
CTNND1-230ENST00000532245 I3L2K1 104 aa6.2□□□□□ -1.42
CTNND1-230ENST00000532245 TRBV12-3P01733 135 aa6.2□□□□□ -1.42
CTNND1-230ENST00000532245 CTSGP08311 255 aa6.2□□□□□ -1.42
CTNND1-230ENST00000532245 SHISA2Q6UWI4 295 aa6.2□□□□□ -1.42
CTNND1-230ENST00000532245 NDUFA11Q86Y39 141 aa6.2□□□□□ -1.42
CTNND1-230ENST00000532245 PRR25Q96S07 402 aa6.2□□□□□ -1.42
CTNND1-230ENST00000532245 LSM4Q9Y4Z0 139 aaKnown RBP6.2□□□□□ -1.42
CTNND1-230ENST00000532245 NAV3Q8IVL0 2385 aa6.2□□□□□ -1.42
CTNND1-230ENST00000532245 TRAV1-1A0A0B4J248 108 aa6.2□□□□□ -1.42
CTNND1-230ENST00000532245 Q6ZSV7 163 aa6.2□□□□□ -1.42
CTNND1-230ENST00000532245 PPBPP02775 128 aa6.2□□□□□ -1.42
CTNND1-230ENST00000532245 DLX4Q92988 240 aaPredicted RBP6.2□□□□□ -1.42
CTNND1-230ENST00000532245 MEGF9Q9H1U4 602 aa6.2□□□□□ -1.42
CTNND1-230ENST00000532245 ZFYVE26Q68DK2 2539 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 D6R8Y8 96 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 HOXA5P20719 270 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 FAM90A2PQ658T7 463 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 TMEM75Q8N9X5 138 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 HIST1H4GQ99525 98 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 MRPL16Q9NX20 251 aaKnown RBP6.19□□□□□ -1.42
CTNND1-230ENST00000532245 LYL1P12980 280 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 OR11H2Q8NH07 326 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 CFHR4Q92496 578 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 C5orf30Q96GV9 206 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 IGHV3-64A0A075B6Q5 118 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 DEFB135Q30KP9 77 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 DEFB4AO15263 64 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 JMJD1CQ15652 2540 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 ORMDL2Q53FV1 153 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 DNLZQ5SXM8 178 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 CSTL1Q9H114 145 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 TEX22C9J3V5 150 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 E7EUB6 86 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 LINC01551Q86U37 167 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 LYPD6Q86Y78 171 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 LINC00469Q8N7U9 141 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 NXT2Q9NPJ8 142 aaKnown RBP6.19□□□□□ -1.42
CTNND1-230ENST00000532245 GSN-AS1Q9NRJ2 163 aa6.19□□□□□ -1.42
CTNND1-230ENST00000532245 A0A0U1RRA0 63 aa6.18□□□□□ -1.42
CTNND1-230ENST00000532245 SMKR1H3BMG3 65 aa6.18□□□□□ -1.42
CTNND1-230ENST00000532245 ZNF295-AS1Q8N0V1 137 aa6.18□□□□□ -1.42
CTNND1-230ENST00000532245 TMEM14CQ9P0S9 112 aa6.18□□□□□ -1.42
CTNND1-230ENST00000532245 TRAV9-1A0A075B6T8 112 aa6.18□□□□□ -1.42
CTNND1-230ENST00000532245 TRAV13-1A0A0B4J241 112 aa6.18□□□□□ -1.42
CTNND1-230ENST00000532245 PAX4O43316 350 aa6.18□□□□□ -1.42
CTNND1-230ENST00000532245 LYRM7Q5U5X0 104 aa6.18□□□□□ -1.42
CTNND1-230ENST00000532245 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-230ENST00000532245 CARHSP1Q9Y2V2 147 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms