RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 VGLL1Q99990 258 aa16.23■□□□□ 0.19
LRRK1-208ENST00000532029 NKX6-2Q9C056 277 aaPredicted RBP16.23■□□□□ 0.19
LRRK1-208ENST00000532029 YTHDF2Q9Y5A9 579 aaKnown RBP16.23■□□□□ 0.19
LRRK1-208ENST00000532029 FAM74A7A6NL05 159 aa16.22■□□□□ 0.19
LRRK1-208ENST00000532029 ZNF705EA8MWA4 302 aaPredicted RBP16.22■□□□□ 0.19
LRRK1-208ENST00000532029 INSP01308 110 aa16.22■□□□□ 0.19
LRRK1-208ENST00000532029 HBE1P02100 147 aa16.22■□□□□ 0.19
LRRK1-208ENST00000532029 PPT1P50897 306 aa16.22■□□□□ 0.19
LRRK1-208ENST00000532029 GNG5P63218 68 aa16.22■□□□□ 0.19
LRRK1-208ENST00000532029 GOLT1AQ6ZVE7 132 aa16.22■□□□□ 0.19
LRRK1-208ENST00000532029 GOLT1BQ9Y3E0 138 aa16.22■□□□□ 0.19
LRRK1-208ENST00000532029 IFNA7P01567 189 aa16.21■□□□□ 0.19
LRRK1-208ENST00000532029 TRAV12-2A0A075B6T6 113 aa16.2■□□□□ 0.18
LRRK1-208ENST00000532029 IGHV3OR16-12A0A075B7B8 117 aa16.2■□□□□ 0.18
LRRK1-208ENST00000532029 TRAV1-1A0A0B4J248 108 aa16.2■□□□□ 0.18
LRRK1-208ENST00000532029 SERTM2A0A1B0GWG4 89 aa16.2■□□□□ 0.18
LRRK1-208ENST00000532029 K7EQM0 130 aa16.2■□□□□ 0.18
LRRK1-208ENST00000532029 ZNF138P52744 262 aa16.2■□□□□ 0.18
LRRK1-208ENST00000532029 CST9LP1Q5W188 147 aa16.2■□□□□ 0.18
LRRK1-208ENST00000532029 ZNF492Q9P255 531 aa16.2■□□□□ 0.18
LRRK1-208ENST00000532029 EPDR1Q9UM22 224 aa16.2■□□□□ 0.18
LRRK1-208ENST00000532029 ARL2-SNX15V9GYD0 113 aa16.2■□□□□ 0.18
LRRK1-208ENST00000532029 CRXO43186 299 aaPredicted RBP16.19■□□□□ 0.18
LRRK1-208ENST00000532029 PAGE4O60829 102 aa16.19■□□□□ 0.18
LRRK1-208ENST00000532029 TCRAP04437 139 aa16.19■□□□□ 0.18
LRRK1-208ENST00000532029 TMEM208Q9BTX3 173 aa16.19■□□□□ 0.18
LRRK1-208ENST00000532029 J3KRW8 73 aa16.18■□□□□ 0.18
LRRK1-208ENST00000532029 BLOC1S1P78537 153 aa16.18■□□□□ 0.18
LRRK1-208ENST00000532029 Q8TAT8 98 aa16.18■□□□□ 0.18
LRRK1-208ENST00000532029 HUWE1Q7Z6Z7 4374 aaKnown RBP16.18■□□□□ 0.18
LRRK1-208ENST00000532029 ZNF705AQ6ZN79 300 aaPredicted RBP16.17■□□□□ 0.18
LRRK1-208ENST00000532029 C1orf158Q8N1D5 194 aa16.17■□□□□ 0.18
LRRK1-208ENST00000532029 CYB561D1Q8N8Q1 229 aa16.17■□□□□ 0.18
LRRK1-208ENST00000532029 ATG101Q9BSB4 218 aa16.17■□□□□ 0.18
LRRK1-208ENST00000532029 CCL20P78556 96 aa16.16■□□□□ 0.18
LRRK1-208ENST00000532029 FAM19A4Q96LR4 140 aa16.16■□□□□ 0.18
LRRK1-208ENST00000532029 MANBALQ9NQG1 85 aa16.16■□□□□ 0.18
LRRK1-208ENST00000532029 GNG13Q9P2W3 67 aa16.16■□□□□ 0.18
LRRK1-208ENST00000532029 X6R8D5 127 aa16.16■□□□□ 0.18
LRRK1-208ENST00000532029 TRBV7-9A0A0J9YWB2 115 aa16.15■□□□□ 0.18
LRRK1-208ENST00000532029 F6UZH7 168 aa16.15■□□□□ 0.18
LRRK1-208ENST00000532029 PEX7O00628 323 aa16.15■□□□□ 0.18
LRRK1-208ENST00000532029 NMBP08949 121 aa16.15■□□□□ 0.18
LRRK1-208ENST00000532029 MIFP14174 115 aa16.15■□□□□ 0.18
LRRK1-208ENST00000532029 CRISP2P16562 243 aa16.15■□□□□ 0.18
LRRK1-208ENST00000532029 GFI1BQ5VTD9 330 aa16.15■□□□□ 0.18
LRRK1-208ENST00000532029 HIST1H2BAQ96A08 127 aa16.15■□□□□ 0.18
LRRK1-208ENST00000532029 C20orf144Q9BQM9 153 aa16.15■□□□□ 0.18
LRRK1-208ENST00000532029 TCEAL7Q9BRU2 100 aa16.15■□□□□ 0.18
LRRK1-208ENST00000532029 LENEPQ9Y5L5 61 aa16.15■□□□□ 0.18
LRRK1-208ENST00000532029 NBEAL2Q6ZNJ1 2754 aa16.15■□□□□ 0.18
LRRK1-208ENST00000532029 TRAV8-1A0A0A6YYK1 113 aa16.14■□□□□ 0.17
LRRK1-208ENST00000532029 IFNA1P01562 189 aa16.14■□□□□ 0.17
LRRK1-208ENST00000532029 GPX1P07203 203 aa16.14■□□□□ 0.17
LRRK1-208ENST00000532029 ATP5G3P48201 142 aa16.14■□□□□ 0.17
LRRK1-208ENST00000532029 KIR3DS1Q14943 382 aa16.14■□□□□ 0.17
LRRK1-208ENST00000532029 TMEM256Q8N2U0 113 aa16.14■□□□□ 0.17
LRRK1-208ENST00000532029 NEU1Q99519 415 aa16.14■□□□□ 0.17
LRRK1-208ENST00000532029 COL7A1Q02388 2944 aa16.14■□□□□ 0.17
LRRK1-208ENST00000532029 A0A0J9YWU9 116 aa16.13■□□□□ 0.17
LRRK1-208ENST00000532029 C7orf71A4D174 169 aa16.13■□□□□ 0.17
LRRK1-208ENST00000532029 SMIM9A6NGZ8 99 aa16.13■□□□□ 0.17
LRRK1-208ENST00000532029 FBLL1A6NHQ2 334 aaKnown RBP16.13■□□□□ 0.17
LRRK1-208ENST00000532029 KLLNB2CW77 178 aa16.13■□□□□ 0.17
LRRK1-208ENST00000532029 CCDC28AQ8IWP9 274 aa16.13■□□□□ 0.17
LRRK1-208ENST00000532029 SGK494Q96LW2 274 aa16.13■□□□□ 0.17
LRRK1-208ENST00000532029 LINC01587Q99440 93 aa16.13■□□□□ 0.17
LRRK1-208ENST00000532029 NIPSNAP3BQ9BS92 247 aa16.13■□□□□ 0.17
LRRK1-208ENST00000532029 NDFIP1Q9BT67 221 aa16.13■□□□□ 0.17
LRRK1-208ENST00000532029 TRAV12-3A0A0B4J271 114 aa16.12■□□□□ 0.17
LRRK1-208ENST00000532029 IGHV4-28A0A0C4DH34 117 aa16.12■□□□□ 0.17
LRRK1-208ENST00000532029 C11orf94C9JXX5 98 aa16.12■□□□□ 0.17
LRRK1-208ENST00000532029 RBMY1A1P0DJD3 496 aaKnown RBP16.12■□□□□ 0.17
LRRK1-208ENST00000532029 RBMY1CP0DJD4 496 aa16.12■□□□□ 0.17
LRRK1-208ENST00000532029 RNASE4P34096 147 aaKnown RBP16.12■□□□□ 0.17
LRRK1-208ENST00000532029 RBMY1FQ15415 496 aaKnown RBP16.12■□□□□ 0.17
LRRK1-208ENST00000532029 ZFAND2AQ8N6M9 145 aa16.12■□□□□ 0.17
LRRK1-208ENST00000532029 TMEM75Q8N9X5 138 aa16.12■□□□□ 0.17
LRRK1-208ENST00000532029 WWC2-AS2Q96NR7 200 aa16.12■□□□□ 0.17
LRRK1-208ENST00000532029 EDA2RQ9HAV5 297 aa16.12■□□□□ 0.17
LRRK1-208ENST00000532029 PSG8Q9UQ74 426 aa16.12■□□□□ 0.17
LRRK1-208ENST00000532029 TENM3Q9P273 2699 aa16.11■□□□□ 0.17
LRRK1-208ENST00000532029 FLI1Q01543 452 aaPredicted RBP16.11■□□□□ 0.17
LRRK1-208ENST00000532029 BTN1A1Q13410 526 aa16.11■□□□□ 0.17
LRRK1-208ENST00000532029 RRN3P1Q2M238 152 aa16.11■□□□□ 0.17
LRRK1-208ENST00000532029 TEX261Q6UWH6 196 aa16.11■□□□□ 0.17
LRRK1-208ENST00000532029 Q8NAQ8 132 aa16.11■□□□□ 0.17
LRRK1-208ENST00000532029 C11orf68Q9H3H3 251 aaKnown RBP16.11■□□□□ 0.17
LRRK1-208ENST00000532029 H7BYZ3 331 aa16.1■□□□□ 0.17
LRRK1-208ENST00000532029 DEFB4AO15263 64 aa16.1■□□□□ 0.17
LRRK1-208ENST00000532029 PRNTQ86SH4 94 aa16.1■□□□□ 0.17
LRRK1-208ENST00000532029 TREM1Q9NP99 234 aa16.1■□□□□ 0.17
LRRK1-208ENST00000532029 TRAV34A0A0B4J273 112 aa16.09■□□□□ 0.17
LRRK1-208ENST00000532029 AKR1C3P42330 323 aa16.09■□□□□ 0.17
LRRK1-208ENST00000532029 TAS2R60P59551 318 aa16.09■□□□□ 0.17
LRRK1-208ENST00000532029 PMS2P11Q13670 270 aa16.09■□□□□ 0.17
LRRK1-208ENST00000532029 ZNF680Q8NEM1 530 aa16.09■□□□□ 0.17
LRRK1-208ENST00000532029 LINC00479Q96M42 142 aa16.09■□□□□ 0.17
LRRK1-208ENST00000532029 TXNDC17Q9BRA2 123 aa16.09■□□□□ 0.17
LRRK1-208ENST00000532029 ZNF705GA8MUZ8 300 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms