RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 SMIM13P0DJ93 91 aa9.06□□□□□ -0.96
USP35-207ENST00000530546 LMO4P61968 165 aa9.06□□□□□ -0.96
USP35-207ENST00000530546 STXBP6Q8NFX7 210 aa9.06□□□□□ -0.96
USP35-207ENST00000530546 MRAP2Q96G30 205 aa9.06□□□□□ -0.96
USP35-207ENST00000530546 ZNF492Q9P255 531 aa9.06□□□□□ -0.96
USP35-207ENST00000530546 F8W1H4 67 aa9.06□□□□□ -0.96
USP35-207ENST00000530546 SLC25A39Q9BZJ4 359 aaPredicted RBP9.06□□□□□ -0.96
USP35-207ENST00000530546 TRAV26-1A0A087WT03 109 aa9.05□□□□□ -0.96
USP35-207ENST00000530546 IGHV4-39P01824 125 aa9.05□□□□□ -0.96
USP35-207ENST00000530546 GP9P14770 177 aa9.05□□□□□ -0.96
USP35-207ENST00000530546 CRYBA4P53673 196 aa9.05□□□□□ -0.96
USP35-207ENST00000530546 LGALS9BQ3B8N2 356 aa9.05□□□□□ -0.96
USP35-207ENST00000530546 LGALS9CQ6DKI2 356 aa9.05□□□□□ -0.96
USP35-207ENST00000530546 GTSF1Q8WW33 167 aa9.05□□□□□ -0.96
USP35-207ENST00000530546 VGLL1Q99990 258 aa9.05□□□□□ -0.96
USP35-207ENST00000530546 EPDR1Q9UM22 224 aa9.05□□□□□ -0.96
USP35-207ENST00000530546 P01737 135 aa9.05□□□□□ -0.96
USP35-207ENST00000530546 MINOS1Q5TGZ0 78 aa9.05□□□□□ -0.96
USP35-207ENST00000530546 ZNF562Q6V9R5 426 aa9.05□□□□□ -0.96
USP35-207ENST00000530546 ZNF479Q96JC4 524 aa9.05□□□□□ -0.96
USP35-207ENST00000530546 GPR82Q96P67 336 aa9.05□□□□□ -0.96
USP35-207ENST00000530546 SRSF8Q9BRL6 282 aaKnown RBP9.05□□□□□ -0.96
USP35-207ENST00000530546 Q9H3A6 140 aa9.05□□□□□ -0.96
USP35-207ENST00000530546 KLF12Q9Y4X4 402 aa9.05□□□□□ -0.96
USP35-207ENST00000530546 MINOS1-NBL1R4GNA1 71 aa9.05□□□□□ -0.96
USP35-207ENST00000530546 HAX1O00165 279 aa9.04□□□□□ -0.96
USP35-207ENST00000530546 IL4P05112 153 aa9.04□□□□□ -0.96
USP35-207ENST00000530546 SAA4P35542 130 aa9.04□□□□□ -0.96
USP35-207ENST00000530546 PGLYRP4Q96LB8 373 aa9.04□□□□□ -0.96
USP35-207ENST00000530546 FANCD2OSQ96PS1 177 aa9.04□□□□□ -0.96
USP35-207ENST00000530546 BCL6BQ8N143 479 aaPredicted RBP9.04□□□□□ -0.96
USP35-207ENST00000530546 EXOC3-AS1Q8N2X6 119 aa9.04□□□□□ -0.96
USP35-207ENST00000530546 MLST8Q9BVC4 326 aa9.04□□□□□ -0.96
USP35-207ENST00000530546 SPANXB1Q9NS25 103 aaPredicted RBP9.04□□□□□ -0.96
USP35-207ENST00000530546 IGSF10Q6WRI0 2623 aa9.04□□□□□ -0.96
USP35-207ENST00000530546 C19orf71A6NCJ1 209 aa9.03□□□□□ -0.96
USP35-207ENST00000530546 NCR2O95944 276 aa9.03□□□□□ -0.96
USP35-207ENST00000530546 MYCNOSP40205 109 aa9.03□□□□□ -0.96
USP35-207ENST00000530546 ZNF138P52744 262 aa9.03□□□□□ -0.96
USP35-207ENST00000530546 SHISA2Q6UWI4 295 aa9.03□□□□□ -0.96
USP35-207ENST00000530546 K7EQM0 130 aa9.03□□□□□ -0.96
USP35-207ENST00000530546 APOHP02749 345 aaPredicted RBP9.03□□□□□ -0.96
USP35-207ENST00000530546 FAM106CPP0CH98 169 aa9.03□□□□□ -0.96
USP35-207ENST00000530546 FCGR2BP31994 310 aaPredicted RBP9.03□□□□□ -0.96
USP35-207ENST00000530546 PSMG4Q5JS54 123 aa9.03□□□□□ -0.96
USP35-207ENST00000530546 Q8N6K4 173 aa9.03□□□□□ -0.96
USP35-207ENST00000530546 C17orf77Q96MU5 243 aa9.03□□□□□ -0.96
USP35-207ENST00000530546 MAP1AP78559 2803 aaPredicted RBP9.03□□□□□ -0.96
USP35-207ENST00000530546 IGHV3-35A0A0C4DH35 117 aa9.03□□□□□ -0.96
USP35-207ENST00000530546 OOSP1A8MZH6 123 aa9.03□□□□□ -0.96
USP35-207ENST00000530546 UBE2E1P51965 193 aa9.03□□□□□ -0.96
USP35-207ENST00000530546 ECSCRQ19T08 205 aa9.03□□□□□ -0.96
USP35-207ENST00000530546 ZFYVE26Q68DK2 2539 aa9.02□□□□□ -0.97
USP35-207ENST00000530546 FLNCQ14315 2725 aa9.02□□□□□ -0.97
USP35-207ENST00000530546 IGLV11-55A0A075B6I3 123 aa9.02□□□□□ -0.97
USP35-207ENST00000530546 IGHV3OR16-8A0A075B7F1 116 aa9.02□□□□□ -0.97
USP35-207ENST00000530546 TRAV8-1A0A0A6YYK1 113 aa9.02□□□□□ -0.97
USP35-207ENST00000530546 IGHV7-81A0A0B4J1V7 117 aa9.02□□□□□ -0.97
USP35-207ENST00000530546 CT45A10P0DMU9 189 aa9.02□□□□□ -0.97
USP35-207ENST00000530546 MFAP4P55083 255 aa9.02□□□□□ -0.97
USP35-207ENST00000530546 Q8N9W7 124 aa9.02□□□□□ -0.97
USP35-207ENST00000530546 RNF125Q96EQ8 232 aa9.02□□□□□ -0.97
USP35-207ENST00000530546 ASCL2Q99929 193 aa9.02□□□□□ -0.97
USP35-207ENST00000530546 OVOL3O00110 214 aa9.02□□□□□ -0.97
USP35-207ENST00000530546 PIP4P2Q8N4L2 257 aa9.02□□□□□ -0.97
USP35-207ENST00000530546 ZNF491Q8N8L2 437 aa9.02□□□□□ -0.97
USP35-207ENST00000530546 DAZAP1Q96EP5 407 aaKnown RBP9.02□□□□□ -0.97
USP35-207ENST00000530546 FMC1Q96HJ9 113 aa9.02□□□□□ -0.97
USP35-207ENST00000530546 CCL19Q99731 98 aa9.02□□□□□ -0.97
USP35-207ENST00000530546 HIGD1BQ9P298 99 aa9.02□□□□□ -0.97
USP35-207ENST00000530546 PRR31Q5SQ13 230 aa9.01□□□□□ -0.97
USP35-207ENST00000530546 GEMIN7Q9H840 131 aaKnown RBP9.01□□□□□ -0.97
USP35-207ENST00000530546 MRPL16Q9NX20 251 aaKnown RBP9.01□□□□□ -0.97
USP35-207ENST00000530546 C21orf62Q9NYP8 219 aa9.01□□□□□ -0.97
USP35-207ENST00000530546 TIMM8BQ9Y5J9 83 aaPredicted RBP9.01□□□□□ -0.97
USP35-207ENST00000530546 NPIPB5A8MRT5 1133 aa9.01□□□□□ -0.97
USP35-207ENST00000530546 NPIPB6E9PJ23 425 aa9.01□□□□□ -0.97
USP35-207ENST00000530546 LTAP01374 205 aa9.01□□□□□ -0.97
USP35-207ENST00000530546 CSN3P07498 182 aa9.01□□□□□ -0.97
USP35-207ENST00000530546 EGR2P11161 476 aaPredicted RBP9.01□□□□□ -0.97
USP35-207ENST00000530546 GOLT1AQ6ZVE7 132 aa9.01□□□□□ -0.97
USP35-207ENST00000530546 GATD1Q8NB37 220 aa9.01□□□□□ -0.97
USP35-207ENST00000530546 AJUBAQ96IF1 538 aa9.01□□□□□ -0.97
USP35-207ENST00000530546 IGHV4-61A0A0C4DH41 118 aa9□□□□□ -0.97
USP35-207ENST00000530546 NPFFO15130 113 aa9□□□□□ -0.97
USP35-207ENST00000530546 TCRAP04437 139 aa9□□□□□ -0.97
USP35-207ENST00000530546 EBI3Q14213 229 aa9□□□□□ -0.97
USP35-207ENST00000530546 TMEM219Q86XT9 240 aa9□□□□□ -0.97
USP35-207ENST00000530546 TTC9CQ8N5M4 171 aa9□□□□□ -0.97
USP35-207ENST00000530546 PRSS3P2Q8NHM4 247 aa9□□□□□ -0.97
USP35-207ENST00000530546 PIFOQ8TCI5 191 aa9□□□□□ -0.97
USP35-207ENST00000530546 SHANK2-AS3Q9BTD1 123 aa9□□□□□ -0.97
USP35-207ENST00000530546 USP9XQ93008 2570 aaPredicted RBP9□□□□□ -0.97
USP35-207ENST00000530546 A0A1B0GW15 77 aa9□□□□□ -0.97
USP35-207ENST00000530546 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9□□□□□ -0.97
USP35-207ENST00000530546 PRB1P04280 392 aa9□□□□□ -0.97
USP35-207ENST00000530546 BRD3OSQ6XYD6 125 aa9□□□□□ -0.97
USP35-207ENST00000530546 Q71RC1 249 aaPredicted RBP9□□□□□ -0.97
USP35-207ENST00000530546 CENPVL3A0A0U1RRI6 287 aa9□□□□□ -0.97
USP35-207ENST00000530546 LINC01548A6NM66 108 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms