RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 ZNF256Q9Y2P7 627 aaPredicted RBP3.68□□□□□ -1.82
CASP4-207ENST00000529565 ERCC8Q13216 396 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 COTL1Q14019 142 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 JOSD1Q15040 202 aaPredicted RBP3.67□□□□□ -1.82
CASP4-207ENST00000529565 COL5A1-AS1Q5SY13 56 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 GTF2H5Q6ZYL4 71 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 NIT1Q86X76 327 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 NRGNQ92686 78 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 C18orf15Q96N68 181 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 PRADC1Q9BSG0 188 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 MEGF9Q9H1U4 602 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 TNRC6AQ8NDV7 1962 aaKnown RBP3.67□□□□□ -1.82
CASP4-207ENST00000529565 A6NDX4 124 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 PRSS46E5RG02 174 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 TMEM262E9PQX1 116 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 RHODO00212 210 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 EMP1P54849 157 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 OR4C5Q8NGB2 326 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 UBE2E2Q96LR5 201 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 FOXC2Q99958 501 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 ARHGAP21Q5T5U3 1957 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 PROP1O75360 226 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 TYMSP04818 313 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 CTSGP08311 255 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 DDTP30046 118 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 PSMB2P49721 201 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 SSBP2P81877 361 aaPredicted RBP3.67□□□□□ -1.82
CASP4-207ENST00000529565 EIF4EBP1Q13541 118 aaPredicted RBP3.67□□□□□ -1.82
CASP4-207ENST00000529565 FAM19A2Q8N3H0 131 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 RNF182Q8N6D2 247 aa3.67□□□□□ -1.82
CASP4-207ENST00000529565 CHD3Q12873 2000 aaKnown RBP3.67□□□□□ -1.82
CASP4-207ENST00000529565 SPG11Q96JI7 2443 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 D6R8Y8 96 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 K7EMT4 169 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 VCYO14598 125 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 EIF4EBP3O60516 100 aaPredicted RBP3.66□□□□□ -1.82
CASP4-207ENST00000529565 HOXD3P31249 432 aaPredicted RBP3.66□□□□□ -1.82
CASP4-207ENST00000529565 SUMO2P61956 95 aaKnown RBP3.66□□□□□ -1.82
CASP4-207ENST00000529565 RPL36AP83881 106 aaKnown RBP3.66□□□□□ -1.82
CASP4-207ENST00000529565 LAGE3Q14657 143 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 TMEM170BQ5T4T1 132 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 WFDC12Q8WWY7 111 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 RPL36ALQ969Q0 106 aaKnown RBP3.66□□□□□ -1.82
CASP4-207ENST00000529565 VCX2Q9H322 139 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 IGF2RP11717 2491 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 C5orf52A6NGY3 159 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 ARMS2P0C7Q2 107 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 CDKN1BP46527 198 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 BLCAPP62952 87 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 EBI3Q14213 229 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 FOXI2Q6ZQN5 318 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 MRAP2Q96G30 205 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 IGHV1OR15-1A0A075B7D0 117 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 WI2-2373I1.2A0A1W2PRP0 233 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 LTAP01374 205 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 RPL35AP18077 110 aaKnown RBP3.66□□□□□ -1.82
CASP4-207ENST00000529565 HIST3H2BBQ8N257 126 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 RAB37Q96AX2 223 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 IFI27L1Q96BM0 104 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 KRTAP3-3Q9BYR6 98 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 KRTAP3-2Q9BYR7 98 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 V9GYV3 84 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 ABCA1O95477 2261 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 TRGV1A0A0A0MS02 117 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 CCL24O00175 119 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 GP9P14770 177 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 SRSF2Q01130 221 aaKnown RBP3.66□□□□□ -1.82
CASP4-207ENST00000529565 AJUBAQ96IF1 538 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 HIST1H4GQ99525 98 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 HIST1H2BLQ99880 126 aa3.66□□□□□ -1.82
CASP4-207ENST00000529565 LOC102724200A0A096LPH7 203 aaPredicted RBP3.65□□□□□ -1.82
CASP4-207ENST00000529565 SMIM27A0A1W2PRY6 76 aa3.65□□□□□ -1.82
CASP4-207ENST00000529565 LY6LH3BQJ8 138 aa3.65□□□□□ -1.82
CASP4-207ENST00000529565 DPM2O94777 84 aa3.65□□□□□ -1.82
CASP4-207ENST00000529565 COX6CP09669 75 aa3.65□□□□□ -1.82
CASP4-207ENST00000529565 HTN3P15516 51 aa3.65□□□□□ -1.82
CASP4-207ENST00000529565 BRWD1-AS2P59051 145 aa3.65□□□□□ -1.82
CASP4-207ENST00000529565 Q0VG73 95 aa3.65□□□□□ -1.82
CASP4-207ENST00000529565 GPHB5Q86YW7 130 aa3.65□□□□□ -1.82
CASP4-207ENST00000529565 C8orf49Q96NF6 230 aa3.65□□□□□ -1.82
CASP4-207ENST00000529565 SPAG8Q99932 426 aaPredicted RBP3.65□□□□□ -1.82
CASP4-207ENST00000529565 MS4A6AQ9H2W1 248 aa3.65□□□□□ -1.82
CASP4-207ENST00000529565 LOC105371267A0A1B0GV96 52 aa3.65□□□□□ -1.82
CASP4-207ENST00000529565 EVI2AP22794 236 aa3.65□□□□□ -1.82
CASP4-207ENST00000529565 DNLZQ5SXM8 178 aa3.65□□□□□ -1.82
CASP4-207ENST00000529565 CFHR4Q92496 578 aa3.65□□□□□ -1.82
CASP4-207ENST00000529565 SELENOKQ9Y6D0 94 aa3.65□□□□□ -1.82
CASP4-207ENST00000529565 PRR14LQ5THK1 2151 aa3.65□□□□□ -1.82
CASP4-207ENST00000529565 DSCAMO60469 2012 aa3.65□□□□□ -1.83
CASP4-207ENST00000529565 A8MWV9 139 aa3.65□□□□□ -1.83
CASP4-207ENST00000529565 BUB3O43684 328 aa3.65□□□□□ -1.83
CASP4-207ENST00000529565 APOC4P55056 127 aa3.65□□□□□ -1.83
CASP4-207ENST00000529565 MEIG1Q5JSS6 88 aa3.65□□□□□ -1.83
CASP4-207ENST00000529565 FAM104BQ5XKR9 115 aa3.65□□□□□ -1.83
CASP4-207ENST00000529565 PATE2Q6UY27 113 aa3.65□□□□□ -1.83
CASP4-207ENST00000529565 ATOH7Q8N100 152 aa3.65□□□□□ -1.83
CASP4-207ENST00000529565 C14orf178Q8N769 122 aaPredicted RBP3.65□□□□□ -1.83
CASP4-207ENST00000529565 SPXQ9BT56 116 aa3.65□□□□□ -1.83
CASP4-207ENST00000529565 EXPH5Q8NEV8 1989 aa3.65□□□□□ -1.83
CASP4-207ENST00000529565 TRAV9-2A0A087WT02 112 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms