RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 SCGB1D1O95968 90 aa9.09□□□□□ -0.95
USF1-208ENST00000528768 GZMBP10144 247 aa9.09□□□□□ -0.95
USF1-208ENST00000528768 SRIP30626 198 aa9.09□□□□□ -0.95
USF1-208ENST00000528768 BMI1P35226 326 aa9.09□□□□□ -0.95
USF1-208ENST00000528768 FAM209BQ5JX69 171 aa9.09□□□□□ -0.95
USF1-208ENST00000528768 CLEC19AQ6UXS0 136 aa9.09□□□□□ -0.95
USF1-208ENST00000528768 TMEM256Q8N2U0 113 aa9.09□□□□□ -0.95
USF1-208ENST00000528768 A6NDX4 124 aa9.08□□□□□ -0.96
USF1-208ENST00000528768 G3V318 75 aa9.08□□□□□ -0.96
USF1-208ENST00000528768 AVPP01185 164 aa9.08□□□□□ -0.96
USF1-208ENST00000528768 IGLV2-11P01706 119 aa9.08□□□□□ -0.96
USF1-208ENST00000528768 TRGV3P03979 118 aa9.08□□□□□ -0.96
USF1-208ENST00000528768 IGF1P05019 195 aa9.08□□□□□ -0.96
USF1-208ENST00000528768 RNASE1P07998 156 aaKnown RBP9.08□□□□□ -0.96
USF1-208ENST00000528768 CAMPP49913 170 aa9.08□□□□□ -0.96
USF1-208ENST00000528768 BRD3OSQ6XYD6 125 aa9.08□□□□□ -0.96
USF1-208ENST00000528768 TMEM219Q86XT9 240 aa9.08□□□□□ -0.96
USF1-208ENST00000528768 KCNS1Q96KK3 526 aa9.08□□□□□ -0.96
USF1-208ENST00000528768 PGLYRP4Q96LB8 373 aa9.08□□□□□ -0.96
USF1-208ENST00000528768 C17orf77Q96MU5 243 aa9.08□□□□□ -0.96
USF1-208ENST00000528768 NOL4LQ96MY1 436 aaPredicted RBP9.08□□□□□ -0.96
USF1-208ENST00000528768 TRAV8-1A0A0A6YYK1 113 aa9.07□□□□□ -0.96
USF1-208ENST00000528768 A0A0G2JLM5 398 aa9.07□□□□□ -0.96
USF1-208ENST00000528768 A0A1B0GXF2 115 aa9.07□□□□□ -0.96
USF1-208ENST00000528768 RBAKDNA6NC62 111 aa9.07□□□□□ -0.96
USF1-208ENST00000528768 A8MWP6 167 aa9.07□□□□□ -0.96
USF1-208ENST00000528768 H3BUX3 64 aa9.07□□□□□ -0.96
USF1-208ENST00000528768 FSHBP01225 129 aa9.07□□□□□ -0.96
USF1-208ENST00000528768 RAB4AP20338 218 aa9.07□□□□□ -0.96
USF1-208ENST00000528768 FOXA3P55318 350 aaPredicted RBP9.07□□□□□ -0.96
USF1-208ENST00000528768 KLF5Q13887 457 aaPredicted RBP9.07□□□□□ -0.96
USF1-208ENST00000528768 C16orf54Q6UWD8 224 aa9.07□□□□□ -0.96
USF1-208ENST00000528768 TCF24Q7RTU0 167 aa9.07□□□□□ -0.96
USF1-208ENST00000528768 MRPL53Q96EL3 112 aaKnown RBP9.07□□□□□ -0.96
USF1-208ENST00000528768 ZFAND3Q9H8U3 227 aa9.07□□□□□ -0.96
USF1-208ENST00000528768 A0A1B0GUT8 65 aa9.06□□□□□ -0.96
USF1-208ENST00000528768 TMEM189A5PLL7 270 aa9.06□□□□□ -0.96
USF1-208ENST00000528768 DNAJC9-AS1A6NH13 148 aa9.06□□□□□ -0.96
USF1-208ENST00000528768 ZNF705FA8MVS1 300 aaPredicted RBP9.06□□□□□ -0.96
USF1-208ENST00000528768 BUB3O43684 328 aa9.06□□□□□ -0.96
USF1-208ENST00000528768 IGHG2P01859 326 aa9.06□□□□□ -0.96
USF1-208ENST00000528768 ZNF705DP0CH99 300 aaPredicted RBP9.06□□□□□ -0.96
USF1-208ENST00000528768 ZNF705BP0CI00 300 aaPredicted RBP9.06□□□□□ -0.96
USF1-208ENST00000528768 IGHV4-38-2P0DP08 117 aa9.06□□□□□ -0.96
USF1-208ENST00000528768 ARL3P36405 182 aa9.06□□□□□ -0.96
USF1-208ENST00000528768 KIAA1644Q3SXP7 199 aa9.06□□□□□ -0.96
USF1-208ENST00000528768 DMRTA1Q5VZB9 504 aa9.06□□□□□ -0.96
USF1-208ENST00000528768 COX8CQ7Z4L0 72 aa9.06□□□□□ -0.96
USF1-208ENST00000528768 PIFOQ8TCI5 191 aa9.06□□□□□ -0.96
USF1-208ENST00000528768 ZC2HC1AQ96GY0 325 aa9.06□□□□□ -0.96
USF1-208ENST00000528768 CCDC140Q96MF4 163 aa9.06□□□□□ -0.96
USF1-208ENST00000528768 NAGKQ9UJ70 344 aa9.06□□□□□ -0.96
USF1-208ENST00000528768 ZNF580Q9UK33 172 aa9.06□□□□□ -0.96
USF1-208ENST00000528768 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.05□□□□□ -0.96
USF1-208ENST00000528768 A0A1W2PS18 150 aa9.05□□□□□ -0.96
USF1-208ENST00000528768 LINC00587B1AMM8 73 aa9.05□□□□□ -0.96
USF1-208ENST00000528768 M0R3E3 92 aa9.05□□□□□ -0.96
USF1-208ENST00000528768 GPX1P07203 203 aa9.05□□□□□ -0.96
USF1-208ENST00000528768 AMTP48728 403 aa9.05□□□□□ -0.96
USF1-208ENST00000528768 LY6EQ16553 131 aa9.05□□□□□ -0.96
USF1-208ENST00000528768 C19orf54Q5BKX5 351 aa9.05□□□□□ -0.96
USF1-208ENST00000528768 LCN12Q6JVE5 192 aa9.05□□□□□ -0.96
USF1-208ENST00000528768 LINC00322Q6ZN03 302 aaPredicted RBP9.05□□□□□ -0.96
USF1-208ENST00000528768 PRDM13Q9H4Q3 707 aa9.05□□□□□ -0.96
USF1-208ENST00000528768 SH2D7A6NKC9 451 aaPredicted RBP9.04□□□□□ -0.96
USF1-208ENST00000528768 LINC01548A6NM66 108 aa9.04□□□□□ -0.96
USF1-208ENST00000528768 NDUFA4O00483 81 aa9.04□□□□□ -0.96
USF1-208ENST00000528768 ZNF324O75467 553 aaPredicted RBP9.04□□□□□ -0.96
USF1-208ENST00000528768 HSBP1O75506 76 aa9.04□□□□□ -0.96
USF1-208ENST00000528768 FRMD6-AS1P0C7T7 363 aa9.04□□□□□ -0.96
USF1-208ENST00000528768 SLAQ13239 276 aa9.04□□□□□ -0.96
USF1-208ENST00000528768 GTSF1Q8WW33 167 aa9.04□□□□□ -0.96
USF1-208ENST00000528768 ALKBH7Q9BT30 221 aaPredicted RBP9.04□□□□□ -0.96
USF1-208ENST00000528768 TP53TG3Q9ULZ0 132 aa9.04□□□□□ -0.96
USF1-208ENST00000528768 SMAD5-AS1Q9Y6J3 95 aa9.04□□□□□ -0.96
USF1-208ENST00000528768 WNK2Q9Y3S1 2297 aa9.04□□□□□ -0.96
USF1-208ENST00000528768 CMYA5Q8N3K9 4069 aa9.03□□□□□ -0.96
USF1-208ENST00000528768 NUPR1O60356 82 aa9.03□□□□□ -0.96
USF1-208ENST00000528768 PMCHP20382 165 aa9.03□□□□□ -0.96
USF1-208ENST00000528768 BCL6BQ8N143 479 aaPredicted RBP9.03□□□□□ -0.96
USF1-208ENST00000528768 C18orf32Q8TCD1 76 aa9.03□□□□□ -0.96
USF1-208ENST00000528768 PRR25Q96S07 402 aa9.03□□□□□ -0.96
USF1-208ENST00000528768 ASCL2Q99929 193 aa9.03□□□□□ -0.96
USF1-208ENST00000528768 U3KQE9 123 aa9.03□□□□□ -0.96
USF1-208ENST00000528768 KMT2CQ8NEZ4 4911 aaKnown RBP9.02□□□□□ -0.96
USF1-208ENST00000528768 IGKV2-40A0A087WW87 121 aaPredicted RBP9.02□□□□□ -0.97
USF1-208ENST00000528768 IGHV3-35A0A0C4DH35 117 aa9.02□□□□□ -0.97
USF1-208ENST00000528768 FABP5P3A8MUU1 101 aa9.02□□□□□ -0.97
USF1-208ENST00000528768 SH2D1AO60880 128 aa9.02□□□□□ -0.97
USF1-208ENST00000528768 IGKV2D-40P01614 121 aaPredicted RBP9.02□□□□□ -0.97
USF1-208ENST00000528768 PF4V1P10720 104 aa9.02□□□□□ -0.97
USF1-208ENST00000528768 DDTP30046 118 aa9.02□□□□□ -0.97
USF1-208ENST00000528768 SAMD13Q5VXD3 122 aa9.02□□□□□ -0.97
USF1-208ENST00000528768 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.02□□□□□ -0.97
USF1-208ENST00000528768 C9orf139Q6ZV77 190 aa9.02□□□□□ -0.97
USF1-208ENST00000528768 REC114Q7Z4M0 266 aa9.02□□□□□ -0.97
USF1-208ENST00000528768 GATD1Q8NB37 220 aa9.02□□□□□ -0.97
USF1-208ENST00000528768 WFDC12Q8WWY7 111 aa9.02□□□□□ -0.97
USF1-208ENST00000528768 CHCHD1Q96BP2 118 aaKnown RBP9.02□□□□□ -0.97
USF1-208ENST00000528768 CITED1Q99966 193 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms