RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 CNFNQ9BYD5 112 aa11.8□□□□□ -0.52
USH1C-207ENST00000527720 PPP1R14DQ9NXH3 145 aa11.8□□□□□ -0.52
USH1C-207ENST00000527720 TMEM213A2RRL7 107 aa11.8□□□□□ -0.52
USH1C-207ENST00000527720 A6NDX4 124 aa11.8□□□□□ -0.52
USH1C-207ENST00000527720 PRAC2D3DTV9 90 aa11.8□□□□□ -0.52
USH1C-207ENST00000527720 DSCR9P59020 149 aa11.8□□□□□ -0.52
USH1C-207ENST00000527720 PET117Q6UWS5 81 aa11.8□□□□□ -0.52
USH1C-207ENST00000527720 FA2HQ7L5A8 372 aa11.8□□□□□ -0.52
USH1C-207ENST00000527720 ATOH7Q8N100 152 aa11.8□□□□□ -0.52
USH1C-207ENST00000527720 ORMDL3Q8N138 153 aa11.8□□□□□ -0.52
USH1C-207ENST00000527720 RNF182Q8N6D2 247 aa11.8□□□□□ -0.52
USH1C-207ENST00000527720 USMG5Q96IX5 58 aa11.8□□□□□ -0.52
USH1C-207ENST00000527720 TRAV8-2A0A0B4J237 113 aa11.79□□□□□ -0.52
USH1C-207ENST00000527720 IGHV3-66A0A0C4DH42 116 aa11.79□□□□□ -0.52
USH1C-207ENST00000527720 ARL3P36405 182 aa11.79□□□□□ -0.52
USH1C-207ENST00000527720 ZNF138P52744 262 aa11.79□□□□□ -0.52
USH1C-207ENST00000527720 HIST1H1AQ02539 215 aaPredicted RBP11.79□□□□□ -0.52
USH1C-207ENST00000527720 ERCC8Q13216 396 aa11.79□□□□□ -0.52
USH1C-207ENST00000527720 C8orf86Q6ZUL3 223 aa11.79□□□□□ -0.52
USH1C-207ENST00000527720 PRSS3P2Q8NHM4 247 aa11.79□□□□□ -0.52
USH1C-207ENST00000527720 OR4C46A6NHA9 309 aa11.79□□□□□ -0.52
USH1C-207ENST00000527720 D6R8Y8 96 aa11.79□□□□□ -0.52
USH1C-207ENST00000527720 NDUFA4O00483 81 aa11.79□□□□□ -0.52
USH1C-207ENST00000527720 ORM1P02763 201 aa11.79□□□□□ -0.52
USH1C-207ENST00000527720 CSN3P07498 182 aa11.79□□□□□ -0.52
USH1C-207ENST00000527720 PPIFP30405 207 aaKnown RBP11.79□□□□□ -0.52
USH1C-207ENST00000527720 SPATA12Q7Z6I5 190 aa11.79□□□□□ -0.52
USH1C-207ENST00000527720 ZNF575Q86XF7 245 aa11.79□□□□□ -0.52
USH1C-207ENST00000527720 PSMG3-AS1Q96PY0 264 aa11.79□□□□□ -0.52
USH1C-207ENST00000527720 TMEM191AQ9H0A3 160 aa11.79□□□□□ -0.52
USH1C-207ENST00000527720 PIEZO1Q92508 2521 aa11.78□□□□□ -0.52
USH1C-207ENST00000527720 RNF224P0DH78 156 aa11.78□□□□□ -0.52
USH1C-207ENST00000527720 TMEM78Q5T7P6 136 aa11.78□□□□□ -0.52
USH1C-207ENST00000527720 C9orf47Q6ZRZ4 202 aa11.78□□□□□ -0.52
USH1C-207ENST00000527720 AMN1Q8IY45 258 aa11.78□□□□□ -0.52
USH1C-207ENST00000527720 OR10AG1Q8NH19 301 aa11.78□□□□□ -0.52
USH1C-207ENST00000527720 GLMPQ8WWB7 406 aa11.78□□□□□ -0.52
USH1C-207ENST00000527720 PRELID3AQ96N28 172 aa11.78□□□□□ -0.52
USH1C-207ENST00000527720 B4DSR2 109 aa11.77□□□□□ -0.52
USH1C-207ENST00000527720 H3BUX3 64 aa11.77□□□□□ -0.52
USH1C-207ENST00000527720 RPLP1P05386 114 aaKnown RBP11.77□□□□□ -0.52
USH1C-207ENST00000527720 GATA3P23771 443 aa11.77□□□□□ -0.52
USH1C-207ENST00000527720 HNRNPA3P51991 378 aaKnown RBP11.77□□□□□ -0.52
USH1C-207ENST00000527720 TWIST1Q15672 202 aa11.77□□□□□ -0.52
USH1C-207ENST00000527720 Q6ZN92 141 aa11.77□□□□□ -0.52
USH1C-207ENST00000527720 AGPAT4-IT1Q9H0P7 198 aa11.77□□□□□ -0.52
USH1C-207ENST00000527720 LINC00527Q9UJ94 153 aa11.77□□□□□ -0.52
USH1C-207ENST00000527720 IGHV3OR16-13A0A075B7E8 117 aa11.77□□□□□ -0.53
USH1C-207ENST00000527720 IGHV3-74A0A0B4J1X5 117 aa11.77□□□□□ -0.53
USH1C-207ENST00000527720 ZNF207O43670 478 aaKnown RBP11.77□□□□□ -0.53
USH1C-207ENST00000527720 MAJINQ3KP22 176 aa11.77□□□□□ -0.53
USH1C-207ENST00000527720 MRPL51Q4U2R6 128 aaKnown RBP11.77□□□□□ -0.53
USH1C-207ENST00000527720 LINC00173Q6ZV60 143 aa11.77□□□□□ -0.53
USH1C-207ENST00000527720 C9orf139Q6ZV77 190 aa11.77□□□□□ -0.53
USH1C-207ENST00000527720 IL17RELQ6ZVW7 336 aa11.77□□□□□ -0.53
USH1C-207ENST00000527720 IGLL1P15814 213 aa11.76□□□□□ -0.53
USH1C-207ENST00000527720 MRPS16Q9Y3D3 137 aaKnown RBP11.76□□□□□ -0.53
USH1C-207ENST00000527720 LY6EQ16553 131 aa11.76□□□□□ -0.53
USH1C-207ENST00000527720 ST20Q9HBF5 79 aa11.76□□□□□ -0.53
USH1C-207ENST00000527720 LENEPQ9Y5L5 61 aa11.76□□□□□ -0.53
USH1C-207ENST00000527720 DOPEY1Q5JWR5 2465 aa11.76□□□□□ -0.53
USH1C-207ENST00000527720 TCAPO15273 167 aa11.75□□□□□ -0.53
USH1C-207ENST00000527720 PPBPP02775 128 aa11.75□□□□□ -0.53
USH1C-207ENST00000527720 SIGLEC8Q9NYZ4 499 aa11.75□□□□□ -0.53
USH1C-207ENST00000527720 ZNF580Q9UK33 172 aa11.75□□□□□ -0.53
USH1C-207ENST00000527720 IGHV3-49A0A0A0MS15 119 aa11.75□□□□□ -0.53
USH1C-207ENST00000527720 IFI27P40305 119 aaPredicted RBP11.75□□□□□ -0.53
USH1C-207ENST00000527720 C16orf92Q96LL3 132 aa11.75□□□□□ -0.53
USH1C-207ENST00000527720 ZNF747Q9BV97 191 aa11.75□□□□□ -0.53
USH1C-207ENST00000527720 SLC25A16P16260 332 aa11.74□□□□□ -0.53
USH1C-207ENST00000527720 TSPOP30536 169 aa11.74□□□□□ -0.53
USH1C-207ENST00000527720 CKS2P33552 79 aa11.74□□□□□ -0.53
USH1C-207ENST00000527720 LINC01545Q5VT33 79 aa11.74□□□□□ -0.53
USH1C-207ENST00000527720 LAMTOR2Q9Y2Q5 125 aa11.74□□□□□ -0.53
USH1C-207ENST00000527720 SVEP1Q4LDE5 3571 aa11.74□□□□□ -0.53
USH1C-207ENST00000527720 A0A0G2JLM5 398 aa11.74□□□□□ -0.53
USH1C-207ENST00000527720 COL5A1-AS1Q5SY13 56 aa11.74□□□□□ -0.53
USH1C-207ENST00000527720 HSBP1L1C9JCN9 74 aa11.73□□□□□ -0.53
USH1C-207ENST00000527720 IGLV1-40P01703 118 aa11.73□□□□□ -0.53
USH1C-207ENST00000527720 CFAP46Q8IYW2 2715 aa11.73□□□□□ -0.53
USH1C-207ENST00000527720 SPTAN1Q13813 2472 aaKnown RBP11.73□□□□□ -0.53
USH1C-207ENST00000527720 MUC21A0A0G2JKD1 596 aa11.72□□□□□ -0.53
USH1C-207ENST00000527720 MUC21A0A140T8X8 626 aa11.72□□□□□ -0.53
USH1C-207ENST00000527720 MUC21Q5SSG8 566 aa11.72□□□□□ -0.53
USH1C-207ENST00000527720 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.72□□□□□ -0.53
USH1C-207ENST00000527720 IGKV3D-20A0A0C4DH25 116 aa11.72□□□□□ -0.53
USH1C-207ENST00000527720 UNQ9165/PRO28630Q6UXU0 137 aa11.72□□□□□ -0.53
USH1C-207ENST00000527720 NPFFR1Q9GZQ6 430 aa11.72□□□□□ -0.53
USH1C-207ENST00000527720 MS4A6AQ9H2W1 248 aa11.72□□□□□ -0.53
USH1C-207ENST00000527720 LOC389332A0A1B0GUA5 103 aa11.71□□□□□ -0.53
USH1C-207ENST00000527720 TRBV12-3P01733 135 aa11.71□□□□□ -0.53
USH1C-207ENST00000527720 PF4V1P10720 104 aa11.71□□□□□ -0.53
USH1C-207ENST00000527720 BLCAPP62952 87 aa11.71□□□□□ -0.53
USH1C-207ENST00000527720 RNF185Q96GF1 192 aa11.71□□□□□ -0.53
USH1C-207ENST00000527720 LINC00477Q96M19 166 aa11.71□□□□□ -0.53
USH1C-207ENST00000527720 A0A096LNJ9 63 aa11.71□□□□□ -0.54
USH1C-207ENST00000527720 OVOL1O14753 267 aa11.71□□□□□ -0.54
USH1C-207ENST00000527720 SMAD7O15105 426 aaKnown RBP11.71□□□□□ -0.54
USH1C-207ENST00000527720 TCF21O43680 179 aa11.71□□□□□ -0.54
USH1C-207ENST00000527720 NPYP01303 97 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms