RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 TCRAP04437 139 aa7.81□□□□□ -1.16
NEDD8-205ENST00000527046 PRM2P04554 102 aa7.81□□□□□ -1.16
NEDD8-205ENST00000527046 NHLRC4P0CG21 123 aaPredicted RBP7.81□□□□□ -1.16
NEDD8-205ENST00000527046 APOC4P55056 127 aa7.81□□□□□ -1.16
NEDD8-205ENST00000527046 DEFB135Q30KP9 77 aa7.81□□□□□ -1.16
NEDD8-205ENST00000527046 PRR9Q5T870 116 aa7.81□□□□□ -1.16
NEDD8-205ENST00000527046 ZFAND2AQ8N6M9 145 aa7.81□□□□□ -1.16
NEDD8-205ENST00000527046 RXFP4Q8TDU9 374 aa7.81□□□□□ -1.16
NEDD8-205ENST00000527046 LINC00479Q96M42 142 aa7.81□□□□□ -1.16
NEDD8-205ENST00000527046 X6R8D5 127 aa7.81□□□□□ -1.16
NEDD8-205ENST00000527046 NBEAL2Q6ZNJ1 2754 aa7.81□□□□□ -1.16
NEDD8-205ENST00000527046 TRAV12-2A0A075B6T6 113 aa7.8□□□□□ -1.16
NEDD8-205ENST00000527046 ZNF705EA8MWA4 302 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-205ENST00000527046 SPRY2O43597 315 aa7.8□□□□□ -1.16
NEDD8-205ENST00000527046 SLC25A5P05141 298 aaKnown RBP7.8□□□□□ -1.16
NEDD8-205ENST00000527046 CRISP2P16562 243 aa7.8□□□□□ -1.16
NEDD8-205ENST00000527046 SPINK13Q1W4C9 94 aa7.8□□□□□ -1.16
NEDD8-205ENST00000527046 ZNF705AQ6ZN79 300 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-205ENST00000527046 C5orf17Q8NAS9 161 aa7.8□□□□□ -1.16
NEDD8-205ENST00000527046 PCNPQ8WW12 178 aaKnown RBP7.8□□□□□ -1.16
NEDD8-205ENST00000527046 LINC00477Q96M19 166 aa7.8□□□□□ -1.16
NEDD8-205ENST00000527046 ODF3Q96PU9 254 aa7.8□□□□□ -1.16
NEDD8-205ENST00000527046 TP53TG1Q9Y2A0 90 aa7.8□□□□□ -1.16
NEDD8-205ENST00000527046 KLLNB2CW77 178 aa7.79□□□□□ -1.16
NEDD8-205ENST00000527046 ZNF324O75467 553 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-205ENST00000527046 GOLT1AQ6ZVE7 132 aa7.79□□□□□ -1.16
NEDD8-205ENST00000527046 IQCF2Q8IXL9 164 aa7.79□□□□□ -1.16
NEDD8-205ENST00000527046 OR10J6PQ8NGY7 276 aa7.79□□□□□ -1.16
NEDD8-205ENST00000527046 Q8TAT8 98 aa7.79□□□□□ -1.16
NEDD8-205ENST00000527046 SGK494Q96LW2 274 aa7.79□□□□□ -1.16
NEDD8-205ENST00000527046 SPATA25Q9BR10 227 aa7.79□□□□□ -1.16
NEDD8-205ENST00000527046 KLF12Q9Y4X4 402 aa7.79□□□□□ -1.16
NEDD8-205ENST00000527046 ARL2-SNX15V9GYD0 113 aa7.79□□□□□ -1.16
NEDD8-205ENST00000527046 TRAV34A0A0B4J273 112 aa7.78□□□□□ -1.16
NEDD8-205ENST00000527046 NMBP08949 121 aa7.78□□□□□ -1.16
NEDD8-205ENST00000527046 ZNF138P52744 262 aa7.78□□□□□ -1.16
NEDD8-205ENST00000527046 BLOC1S1P78537 153 aa7.78□□□□□ -1.16
NEDD8-205ENST00000527046 GFI1BQ5VTD9 330 aa7.78□□□□□ -1.16
NEDD8-205ENST00000527046 C2CD4CQ8TF44 421 aa7.78□□□□□ -1.16
NEDD8-205ENST00000527046 IGF2BP2-AS1Q96M15 143 aa7.78□□□□□ -1.16
NEDD8-205ENST00000527046 RCHY1Q96PM5 261 aa7.78□□□□□ -1.16
NEDD8-205ENST00000527046 RARRES2Q99969 163 aa7.78□□□□□ -1.16
NEDD8-205ENST00000527046 EDA2RQ9HAV5 297 aa7.78□□□□□ -1.16
NEDD8-205ENST00000527046 TRBV7-9A0A0J9YWB2 115 aa7.77□□□□□ -1.17
NEDD8-205ENST00000527046 HBE1P02100 147 aa7.77□□□□□ -1.17
NEDD8-205ENST00000527046 CDKN1BP46527 198 aa7.77□□□□□ -1.17
NEDD8-205ENST00000527046 CSN1S1P47710 185 aa7.77□□□□□ -1.17
NEDD8-205ENST00000527046 NUTF2P61970 127 aaKnown RBP7.77□□□□□ -1.17
NEDD8-205ENST00000527046 CST9LP1Q5W188 147 aa7.77□□□□□ -1.17
NEDD8-205ENST00000527046 ZNF575Q86XF7 245 aa7.77□□□□□ -1.17
NEDD8-205ENST00000527046 OR11H2Q8NH07 326 aa7.77□□□□□ -1.17
NEDD8-205ENST00000527046 ATG101Q9BSB4 218 aa7.77□□□□□ -1.17
NEDD8-205ENST00000527046 NKX6-2Q9C056 277 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-205ENST00000527046 GNG13Q9P2W3 67 aa7.77□□□□□ -1.17
NEDD8-205ENST00000527046 RPH3ALQ9UNE2 315 aa7.77□□□□□ -1.17
NEDD8-205ENST00000527046 U3KQK5 164 aa7.77□□□□□ -1.17
NEDD8-205ENST00000527046 LOC102723971A0A1B0GUV8 181 aa7.76□□□□□ -1.17
NEDD8-205ENST00000527046 PEX7O00628 323 aa7.76□□□□□ -1.17
NEDD8-205ENST00000527046 AZU1P20160 251 aa7.76□□□□□ -1.17
NEDD8-205ENST00000527046 ZNF80P51504 273 aaPredicted RBP7.76□□□□□ -1.17
NEDD8-205ENST00000527046 BTN1A1Q13410 526 aa7.76□□□□□ -1.17
NEDD8-205ENST00000527046 CYB561D1Q8N8Q1 229 aa7.76□□□□□ -1.17
NEDD8-205ENST00000527046 Q8NAQ8 132 aa7.76□□□□□ -1.17
NEDD8-205ENST00000527046 CMTM2Q8TAZ6 248 aa7.76□□□□□ -1.17
NEDD8-205ENST00000527046 HIST1H2BAQ96A08 127 aa7.76□□□□□ -1.17
NEDD8-205ENST00000527046 C11orf52Q96A22 123 aa7.76□□□□□ -1.17
NEDD8-205ENST00000527046 C8orf49Q96NF6 230 aa7.76□□□□□ -1.17
NEDD8-205ENST00000527046 NEU1Q99519 415 aa7.76□□□□□ -1.17
NEDD8-205ENST00000527046 C1QTNF4Q9BXJ3 329 aa7.76□□□□□ -1.17
NEDD8-205ENST00000527046 PSG8Q9UQ74 426 aa7.76□□□□□ -1.17
NEDD8-205ENST00000527046 LENEPQ9Y5L5 61 aa7.76□□□□□ -1.17
NEDD8-205ENST00000527046 TGP01266 2768 aa7.76□□□□□ -1.17
NEDD8-205ENST00000527046 TRBV6-1A0A0K0K1D8 114 aa7.75□□□□□ -1.17
NEDD8-205ENST00000527046 SERTM2A0A1B0GWG4 89 aa7.75□□□□□ -1.17
NEDD8-205ENST00000527046 SCO2A0A1W2PP80 73 aa7.75□□□□□ -1.17
NEDD8-205ENST00000527046 PLAC8L1A1L4L8 177 aa7.75□□□□□ -1.17
NEDD8-205ENST00000527046 C11orf94C9JXX5 98 aa7.75□□□□□ -1.17
NEDD8-205ENST00000527046 J3KRW8 73 aa7.75□□□□□ -1.17
NEDD8-205ENST00000527046 IFNA7P01567 189 aa7.75□□□□□ -1.17
NEDD8-205ENST00000527046 AMBPP02760 352 aa7.75□□□□□ -1.17
NEDD8-205ENST00000527046 BCL2P10415 239 aa7.75□□□□□ -1.17
NEDD8-205ENST00000527046 CRIP1P50238 77 aa7.75□□□□□ -1.17
NEDD8-205ENST00000527046 PPT1P50897 306 aa7.75□□□□□ -1.17
NEDD8-205ENST00000527046 FLI1Q01543 452 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-205ENST00000527046 TMEM78Q5T7P6 136 aa7.75□□□□□ -1.17
NEDD8-205ENST00000527046 COX8CQ7Z4L0 72 aa7.75□□□□□ -1.17
NEDD8-205ENST00000527046 TMEM75Q8N9X5 138 aa7.75□□□□□ -1.17
NEDD8-205ENST00000527046 DERL1Q9BUN8 251 aa7.75□□□□□ -1.17
NEDD8-205ENST00000527046 MANBALQ9NQG1 85 aa7.75□□□□□ -1.17
NEDD8-205ENST00000527046 TRAV12-3A0A0B4J271 114 aa7.74□□□□□ -1.17
NEDD8-205ENST00000527046 IGHV4-28A0A0C4DH34 117 aa7.74□□□□□ -1.17
NEDD8-205ENST00000527046 C9JQL5 133 aa7.74□□□□□ -1.17
NEDD8-205ENST00000527046 RNASE4P34096 147 aaKnown RBP7.74□□□□□ -1.17
NEDD8-205ENST00000527046 LEPP41159 167 aa7.74□□□□□ -1.17
NEDD8-205ENST00000527046 SRSF3P84103 164 aaKnown RBP7.74□□□□□ -1.17
NEDD8-205ENST00000527046 TMEM183BQ1AE95 376 aa7.74□□□□□ -1.17
NEDD8-205ENST00000527046 ZNF506Q5JVG8 444 aa7.74□□□□□ -1.17
NEDD8-205ENST00000527046 LCE2DQ5TA82 110 aaPredicted RBP7.74□□□□□ -1.17
NEDD8-205ENST00000527046 TCEAL7Q9BRU2 100 aa7.74□□□□□ -1.17
NEDD8-205ENST00000527046 ZMAT4Q9H898 229 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms