RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 TRGC1P0CF51 173 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 ZNF883P0CG24 379 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 CD52P31358 61 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 SNRPD3P62318 126 aaKnown RBP3.04□□□□□ -1.92
CD44-213ENST00000525209 AKR1C1Q04828 323 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 KISS1Q15726 138 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 C10orf91Q5T1B1 145 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 ZFP2Q6ZN57 461 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 GTSCR1Q86UQ5 136 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 BPIFA4PQ86YQ2 179 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 ATOH7Q8N100 152 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 OR4B1Q8NGF8 309 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 LCN9Q8WX39 176 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 RBPMSQ93062 196 aaKnown RBP3.04□□□□□ -1.92
CD44-213ENST00000525209 DIRC1Q969H9 104 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 MCEEQ96PE7 176 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 ZNF443Q9Y2A4 671 aaPredicted RBP3.04□□□□□ -1.92
CD44-213ENST00000525209 OBSL1O75147 1896 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 CFAP54Q96N23 3096 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 MUC3AQ02505 3323 aa3.04□□□□□ -1.92
CD44-213ENST00000525209 BAZ2BQ9UIF8 2168 aaKnown RBP3.04□□□□□ -1.92
CD44-213ENST00000525209 LRP4O75096 1905 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 SDK1Q7Z5N4 2213 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 IGKV3D-20A0A0C4DH25 116 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 A0A1W2PP18 115 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 A6NDX4 124 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 LOC730098B7Z3J9 87 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 C3orf84H3BNL1 204 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 LECT2O14960 151 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 SYNGR2O43760 224 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 HRASP01112 189 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 HBDP02042 147 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 ZNF19P17023 458 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 FXYD7P58549 80 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 EIF5AL1Q6IS14 154 aaKnown RBP3.03□□□□□ -1.92
CD44-213ENST00000525209 SLC35E3Q7Z769 313 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 C10orf111Q8N326 155 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 KCNRGQ8N5I3 272 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 SIGLECL1Q8N7X8 197 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 Q8N9W7 124 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 BPIFB6Q8NFQ5 453 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 LINC00479Q96M42 142 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 NAA60Q9H7X0 242 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 ZNRD1Q9P1U0 126 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 DNAJC15Q9Y5T4 150 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 CHCHD2Q9Y6H1 151 aaPredicted RBP3.03□□□□□ -1.92
CD44-213ENST00000525209 DOCK8Q8NF50 2099 aa3.03□□□□□ -1.92
CD44-213ENST00000525209 RIF1Q5UIP0 2472 aaKnown RBP3.03□□□□□ -1.92
CD44-213ENST00000525209 PCSK5Q92824 1860 aa3.03□□□□□ -1.93
CD44-213ENST00000525209 CHD7Q9P2D1 2997 aa3.03□□□□□ -1.93
CD44-213ENST00000525209 LCTP09848 1927 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 TRBV24-1A0A075B6N3 115 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 IGKV6D-41A0A0C4DH26 115 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 A0A0J9YW62 118 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 KLF18A0A0U1RQI7 1052 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 A6NED7 52 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 H7C423 109 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 GEMIN2O14893 280 aaKnown RBP3.02□□□□□ -1.93
CD44-213ENST00000525209 SLC25A20O43772 301 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 SH2D1AO60880 128 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 MT-ND6P03923 174 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 TRGV3P03979 118 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 GZMBP10144 247 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 IFITM1P13164 125 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 SLC25A16P16260 332 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 ZNF90Q03938 601 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 IL17AQ16552 155 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 C9orf129Q5T035 196 aaKnown RBP3.02□□□□□ -1.93
CD44-213ENST00000525209 LINC01545Q5VT33 79 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 MRPL54Q6P161 138 aaKnown RBP3.02□□□□□ -1.93
CD44-213ENST00000525209 ZNF705AQ6ZN79 300 aaPredicted RBP3.02□□□□□ -1.93
CD44-213ENST00000525209 POM121L12Q8N7R1 296 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 C3orf56Q8N813 242 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 CNEP1R1Q8N9A8 125 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 CLDND2Q8NHS1 167 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 LINC01560Q8TB33 94 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 COPS9Q8WXC6 57 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 ZNF714Q96N38 554 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 SCGB3A1Q96QR1 104 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 AGPAT4-IT1Q9H0P7 198 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 SLC35B3Q9H1N7 401 aa3.02□□□□□ -1.93
CD44-213ENST00000525209 LSM2Q9Y333 95 aaKnown RBP3.02□□□□□ -1.93
CD44-213ENST00000525209 SHROOM3Q8TF72 1996 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 TRANK1O15050 2925 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 SPTBN2O15020 2390 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 CHD9Q3L8U1 2897 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 TRBV20-1A0A075B6N2 111 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 OR51F1A6NGY5 319 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 CYSRT1A8MQ03 144 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 C17orf51A8MQB3 221 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 RER1O15258 196 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 IGHV1-69P01742 117 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 CTSDP07339 412 aaPredicted RBP3.01□□□□□ -1.93
CD44-213ENST00000525209 CFC1P0CG37 223 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 FOXA1P55317 472 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 UBA52P62987 128 aaKnown RBP3.01□□□□□ -1.93
CD44-213ENST00000525209 RPL36AP83881 106 aaKnown RBP3.01□□□□□ -1.93
CD44-213ENST00000525209 ZNF322Q6U7Q0 402 aaPredicted RBP3.01□□□□□ -1.93
CD44-213ENST00000525209 PATE2Q6UY27 113 aa3.01□□□□□ -1.93
CD44-213ENST00000525209 SOSTDC1Q6X4U4 206 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms