RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 NMBP08949 121 aa11.3□□□□□ -0.6
PVT1-220ENST00000524165 IGLC2P0DOY2 106 aa11.3□□□□□ -0.6
PVT1-220ENST00000524165 CRISP2P16562 243 aa11.3□□□□□ -0.6
PVT1-220ENST00000524165 PXDC1Q5TGL8 231 aa11.3□□□□□ -0.6
PVT1-220ENST00000524165 OR51S1Q8NGJ8 323 aa11.3□□□□□ -0.6
PVT1-220ENST00000524165 LINC00477Q96M19 166 aa11.3□□□□□ -0.6
PVT1-220ENST00000524165 TRAV4A0A0B4J268 109 aa11.29□□□□□ -0.6
PVT1-220ENST00000524165 SMCO3A2RU48 225 aa11.29□□□□□ -0.6
PVT1-220ENST00000524165 TOR2AQ5JU69 321 aa11.29□□□□□ -0.6
PVT1-220ENST00000524165 LINC00305Q7Z4B0 112 aa11.29□□□□□ -0.6
PVT1-220ENST00000524165 RPH3ALQ9UNE2 315 aa11.29□□□□□ -0.6
PVT1-220ENST00000524165 FAT4Q6V0I7 4981 aa11.28□□□□□ -0.6
PVT1-220ENST00000524165 H3BQ15 152 aa11.28□□□□□ -0.6
PVT1-220ENST00000524165 K7EPK0 472 aa11.28□□□□□ -0.6
PVT1-220ENST00000524165 SRPXP78539 464 aa11.28□□□□□ -0.6
PVT1-220ENST00000524165 ERCC8Q13216 396 aa11.28□□□□□ -0.6
PVT1-220ENST00000524165 HSD17B11Q8NBQ5 300 aa11.28□□□□□ -0.6
PVT1-220ENST00000524165 MRPL53Q96EL3 112 aaKnown RBP11.28□□□□□ -0.6
PVT1-220ENST00000524165 DPH3P1Q9H4G8 78 aa11.28□□□□□ -0.6
PVT1-220ENST00000524165 PIGBOS1A0A0B4J2F0 54 aa11.27□□□□□ -0.61
PVT1-220ENST00000524165 GUK1Q16774 197 aa11.27□□□□□ -0.61
PVT1-220ENST00000524165 SPANXN5Q5MJ07 72 aa11.27□□□□□ -0.61
PVT1-220ENST00000524165 FAAP20Q6NZ36 180 aa11.27□□□□□ -0.61
PVT1-220ENST00000524165 SPXQ9BT56 116 aa11.27□□□□□ -0.61
PVT1-220ENST00000524165 A0A0D9SG52 128 aa11.26□□□□□ -0.61
PVT1-220ENST00000524165 FABP12A6NFH5 140 aa11.26□□□□□ -0.61
PVT1-220ENST00000524165 DISC1C4P0D8 188 aa11.26□□□□□ -0.61
PVT1-220ENST00000524165 WRBO00258 174 aa11.26□□□□□ -0.61
PVT1-220ENST00000524165 SYNGR2O43760 224 aa11.26□□□□□ -0.61
PVT1-220ENST00000524165 HPGDSO60760 199 aa11.26□□□□□ -0.61
PVT1-220ENST00000524165 SLC25A6P12236 298 aa11.26□□□□□ -0.61
PVT1-220ENST00000524165 Q6ZQT7 251 aa11.26□□□□□ -0.61
PVT1-220ENST00000524165 ZFAND2AQ8N6M9 145 aa11.26□□□□□ -0.61
PVT1-220ENST00000524165 OR4C5Q8NGB2 326 aa11.26□□□□□ -0.61
PVT1-220ENST00000524165 RMI2Q96E14 147 aa11.26□□□□□ -0.61
PVT1-220ENST00000524165 LINC01600Q96MT4 127 aa11.26□□□□□ -0.61
PVT1-220ENST00000524165 AGPAT4-IT1Q9H0P7 198 aa11.26□□□□□ -0.61
PVT1-220ENST00000524165 TRAV8-1A0A0A6YYK1 113 aa11.25□□□□□ -0.61
PVT1-220ENST00000524165 DUXBA0A1W2PPF3 345 aa11.25□□□□□ -0.61
PVT1-220ENST00000524165 ZNF253O75346 499 aa11.25□□□□□ -0.61
PVT1-220ENST00000524165 ODF1Q14990 250 aa11.25□□□□□ -0.61
PVT1-220ENST00000524165 PRR9Q5T870 116 aa11.25□□□□□ -0.61
PVT1-220ENST00000524165 STRAPQ9Y3F4 350 aaKnown RBP11.25□□□□□ -0.61
PVT1-220ENST00000524165 GGTLC3B5MD39 225 aa11.24□□□□□ -0.61
PVT1-220ENST00000524165 ANXA3P12429 323 aa11.24□□□□□ -0.61
PVT1-220ENST00000524165 GATA1P15976 413 aaPredicted RBP11.24□□□□□ -0.61
PVT1-220ENST00000524165 FAM122CQ6P4D5 195 aa11.24□□□□□ -0.61
PVT1-220ENST00000524165 IZUMO2Q6UXV1 221 aa11.24□□□□□ -0.61
PVT1-220ENST00000524165 Q8N3U1 123 aa11.24□□□□□ -0.61
PVT1-220ENST00000524165 SRRQ9GZT4 340 aa11.24□□□□□ -0.61
PVT1-220ENST00000524165 H3BP45 60 aa11.23□□□□□ -0.61
PVT1-220ENST00000524165 M0R3E3 92 aa11.23□□□□□ -0.61
PVT1-220ENST00000524165 POLR2GP62487 172 aaKnown RBP eCLIP11.23□□□□□ -0.61
PVT1-220ENST00000524165 SSBP1Q04837 148 aaKnown RBP11.23□□□□□ -0.61
PVT1-220ENST00000524165 FFAR4Q5NUL3 377 aa11.23□□□□□ -0.61
PVT1-220ENST00000524165 DAZ4Q86SG3 579 aaKnown RBP11.23□□□□□ -0.61
PVT1-220ENST00000524165 C15orf40Q8WUR7 153 aa11.23□□□□□ -0.61
PVT1-220ENST00000524165 GTSF1LQ9H1H1 148 aa11.23□□□□□ -0.61
PVT1-220ENST00000524165 VCX3BQ9H321 246 aa11.23□□□□□ -0.61
PVT1-220ENST00000524165 NPVFQ9HCQ7 196 aa11.23□□□□□ -0.61
PVT1-220ENST00000524165 DAZ3Q9NR90 486 aaKnown RBP11.23□□□□□ -0.61
PVT1-220ENST00000524165 RAB26Q9ULW5 256 aa11.23□□□□□ -0.61
PVT1-220ENST00000524165 FAM25AB3EWG3 89 aa11.22□□□□□ -0.61
PVT1-220ENST00000524165 FAM25CB3EWG5 89 aa11.22□□□□□ -0.61
PVT1-220ENST00000524165 FAM25GB3EWG6 89 aa11.22□□□□□ -0.61
PVT1-220ENST00000524165 YIPF6Q96EC8 236 aa11.22□□□□□ -0.61
PVT1-220ENST00000524165 PRRT1Q99946 306 aa11.22□□□□□ -0.61
PVT1-220ENST00000524165 PRELID1Q9Y255 219 aa11.22□□□□□ -0.61
PVT1-220ENST00000524165 LSM3P62310 102 aaKnown RBP11.21□□□□□ -0.61
PVT1-220ENST00000524165 NEDD8Q15843 81 aa11.21□□□□□ -0.61
PVT1-220ENST00000524165 C14orf177Q52M58 125 aa11.21□□□□□ -0.61
PVT1-220ENST00000524165 ZNF546Q86UE3 836 aa11.21□□□□□ -0.61
PVT1-220ENST00000524165 LPAP08519 4548 aa11.21□□□□□ -0.62
PVT1-220ENST00000524165 MUC2Q02817 5179 aa11.2□□□□□ -0.62
PVT1-220ENST00000524165 IGHV3-16A0A0C4DH30 117 aa11.2□□□□□ -0.62
PVT1-220ENST00000524165 FNDC10F2Z333 226 aa11.2□□□□□ -0.62
PVT1-220ENST00000524165 GOSR2O14653 212 aa11.2□□□□□ -0.62
PVT1-220ENST00000524165 COX7A2P2O60397 106 aa11.2□□□□□ -0.62
PVT1-220ENST00000524165 SLC38A11Q08AI6 406 aa11.2□□□□□ -0.62
PVT1-220ENST00000524165 SCGB3A2Q96PL1 93 aa11.2□□□□□ -0.62
PVT1-220ENST00000524165 PRADC1Q9BSG0 188 aa11.2□□□□□ -0.62
PVT1-220ENST00000524165 SH3BGRL3Q9H299 93 aa11.2□□□□□ -0.62
PVT1-220ENST00000524165 IGKV2D-24A0A075B6R9 120 aa11.19□□□□□ -0.62
PVT1-220ENST00000524165 VWC2Q2TAL6 325 aa11.19□□□□□ -0.62
PVT1-220ENST00000524165 TMEM78Q5T7P6 136 aa11.19□□□□□ -0.62
PVT1-220ENST00000524165 C10orf113Q5VZT2 155 aa11.19□□□□□ -0.62
PVT1-220ENST00000524165 SLC25A29Q8N8R3 303 aa11.19□□□□□ -0.62
PVT1-220ENST00000524165 EXTL2Q9UBQ6 330 aa11.19□□□□□ -0.62
PVT1-220ENST00000524165 TRGV11A0A075B6L2 103 aa11.18□□□□□ -0.62
PVT1-220ENST00000524165 AKAIN1P0CW23 69 aa11.18□□□□□ -0.62
PVT1-220ENST00000524165 RHOHQ15669 191 aa11.18□□□□□ -0.62
PVT1-220ENST00000524165 MUC21Q5SSG8 566 aa11.18□□□□□ -0.62
PVT1-220ENST00000524165 ZNF492Q9P255 531 aa11.18□□□□□ -0.62
PVT1-220ENST00000524165 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.18□□□□□ -0.62
PVT1-220ENST00000524165 TRBV19A0A075B6N1 114 aa11.17□□□□□ -0.62
PVT1-220ENST00000524165 TRBV7-9A0A0J9YWB2 115 aa11.17□□□□□ -0.62
PVT1-220ENST00000524165 TRBV6-4A0A1B0GX49 114 aa11.17□□□□□ -0.62
PVT1-220ENST00000524165 M0R2P5 195 aa11.17□□□□□ -0.62
PVT1-220ENST00000524165 HIST1H1EP10412 219 aaKnown RBP11.17□□□□□ -0.62
PVT1-220ENST00000524165 RRAS2P62070 204 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms